LOC110490250 (LOC106609227)


Basic Information

Item Value
gene id LOC110490250
gene name LOC106609227
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 50358439 ~ 50372219 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110490250
CTGTTGGGAATGGCTTATTTCAATGGTCTCTATGGGACGTTGAATGACTTTTAACAGAGCTGGTGGACAGCTGTTCCATTAGTTTATCTCTCTAGAAAGGTGTCAATTTAGCTTGAACATGGAGGCCCTAATCCCCGTTGTAAACAAGCTTCAAGATGTCTTCAATACGGTGGGAGCAGACATATTACAGCTGCCGCAGATAGCAGTCGTTGGAACCCAGGCGTGGAAGGAGATGAATGGGGCAAGTTCTTACACACCAAAAATAAGATCTACACAGACGTCAGTGAAATCAGGCGGGAAAATGAAACTGAAAGAATTTCGGGTACTGACCAGGGGATCAGTGATGAGCCTATTCACCTGAAGATCTTCTCTCCTAATGTGGTGAACCTCACTCTGGTGGATCTACCCGGCATCACCAAGGAGGACACTGGCGGTGGTGACCAAGCTGGACTTGATGGACGCTGGTACTGATGCTATGGACGTCCTAATGGGCCGGGCCATCCCTGTCAAACTGGGCCTCATCGGAGTGGTCAACAGGAGTCAGTTGGACATCAACAATAAGAAGTCGGTGAGCGATGCCATCCGAGATGAACATGCTTTCCTGCAGAAGAAGTATCCCTCTCTCGCTAATCGAAATGGAACCAAATATCTGGCCAGGACTCTGAACAGTCTGGCGTCAATCACTCAGCAGATAGTTTAATCCATAACATACTGCATCGAGTCTAGTGACCTTCAACCCGAGTGTCACAAGCAGAACACTGGAAATCATGTGTATTACAGAAAGGTTACTGATGCACCACATCGGAGACTGTCTACCGGAGCTGAAGACGCGTATCAACTTGCTGGCGGCCCAGTACCAGTCTCTGTTAAGCAGCTACGGCCAGCCCGTTGAGGACCAGAATGCCACCCTGCTGCAGCTCATCACCAAGTTCGCTGCGGAGTACTGCCACACCATCGAGGGCACGGCCAAGTTCATTGAGACTGCCGAGCTATGCGGTGGTGCTAGAATCTGTTACACATTTCACAAGACTTTTGGGCGAACTTTAGTCAGTGGATCCCCTAGGAGGTCTCGACACCATAGATATCCTGACTGCCATCAGGAACGCCACTggcCCTCGCCCTTCTCTGTTTGTGCCCGAGGTGTCGTTTGAGCTGCTGGTGAAGAAGCAGGTGAAGAGACTGGAGGAGCCCAGTCTGCGCTGTGTAGAGCtggtccatgaggagatgcagaGGATCATCCAACACTGCagcacacagGAGTTGTTGAGATTTCCAAAGCTCCACGATGCCATAGTGGAAGTGGTCACTTCTCTGCTCAGGAAAAGGCTGCCTATCACCAATGAGATGGTGCATAATCTGGTGGCCATTGAGCTGGCCTACGTCAACACCAAACACCCTGACTTTGCTGATGCCTGTGGGGTCATGAACAACAACATAGAGGAGTCGAGGAGAAACCGAATGAGAGAGCTGCCCACTGCAGTCCCCAGGGATAAGTCAGTAGTTAATGGTCCAGTCGGCCAGCTTCCCATTCCTACCGAGCCCCCTGCCTCTGTGGACACGGAGGGTGCCAAGGCTCCCGGAGCAGGGCCCCAGGGGGACCAGGAGGGGACAGGGAACTGGAGAGGCATGCTGAAGAAAGGGGACGAGGGGGCCCCCACCTCTGGCCCCTCCAGCCCTCATAAGGGTCTTCCTGTCAACCTGCTGGATGTGCGTGCCCAAGGCAGTGATGCACTTCCTGGTGAACCATGTGAGGGAGAGTCTGAAGAGTGAGCTGGTGGGTCAGCTCTATAAGTCTGGTCTTTTCAACGACCTCCTCACTGAGGCTGCAGACATGCTAGAGGCTCTGCAGAAGGCCTGTCAGGTCATTGCTGAGATCAGAGAGACTCATCTATGGTAAGGAGGAGAACTCCACTGAAGTCAATCTGTAATCTACTCATCATGTCTGGAAGACTTGGGATTTGCCAATATTAAAGTGCACTGTTGCGGTTCACGGAAGTGTGTTTATACATGGTACTAGCTCACAGCTATGTTAAGGCTAAATACATATCATCGCTCACCTGTGTAAGAAACCGATACCTCATTAAGACACATCTGTGCTGTGTAGTTATAACCAAGAATGTTTGAAGGCCAAACTTGTCCTGTCTTCAGCTGTCCGTGTGTAACACAACAGGGAGAGATTGATGGATCGTTCTTTCTGTAGCCTAAATCAAAGCTGAAACTCAAACCTCAGTTTCAAACCCTCTCCAGTTCCCGTAAATTTGATACTCCCATCCCACATTGTTTATGAAAATGTATAACACTCCAAAATATACTGTAACCCTGAATATCTTTATTTGTTAAATGTATTTTAAGTTCTAATGTCAATAGCACTGGTGCCGCTTACTATGTCATTTTATGTCTACAATGTGCGGGCAATATGTGGTGCATCACTTACGTGAAAAAATACAGGAATTTCACATGTGTGAAATGTCATAACATGTTAAACATGTTAAATACATGTGACAACATTGTCTCATGTTAAATACATGTGACAACATGGGGATGCAAAATGTGATTGTGATACCATTAACATTTTAGCATGTGAAAACCCAGGTGTCAAATGTCATTGCTTTAAAAAGCATTATTGAAATGAAACAGTTCCGGTTTGCTCCAGAGATTTTTACTGCTAAGTGAAAGTGTTAACATTAAAGGACAGTATGCTGATTACCTGGGAATCaacctcacctgggatttgaactcacaacttcTTGGTTGATAATTAACTGAAGTTTGTGCTGCGCCACCAGGTCTGTGGACCTATGGGAGATTGACTATGCATAcacggagtataccaaacattcggaacaccttcctaatattgagttgcagcccccccccccccccccccgccctcagaacagcctcaattcgtcagggcatggacttagtgatgctggcccatgttgactccaatgctccccacagttgtgtcaagttggctggatgtcctttgggtggtgaaccattcttgatacacacaggtgtggaacccagcagggttgcagttcttgactcaaaccggtgcgcctggcaccttctaccataccttgttcaaaggAACTGAACTATTTCCTCTTACCCTCTGAAGGGCACTCATACACTCATACACaagccatgtctcaattgtctcaaggcttaactccttcgttaacctgtctcctcctcttcatctacactggttgaagtggatttaacaagagacatcaataagggatcatatctttcacctggtcagtctgtcatggaaagagcaggtgttcttaatgttttgaaaACTCAGTGTATATTGGCACGAAAAATGTGTTGCACTTTGCCTATTTGTCGAACAACTTGAAGGTGTTATTTCTAATAAAATGACAGTATGCTGCTGTATTCTGATTTCAATtactg
>TU1486590
GGTATTTTCAGACCACTTTGTGTCATTGTTTCTGACCTGCCACTCATGTTGTTATTTCTGACTCAGTGTTTTGCACCCCTTCACACCAATTGTACCAGCCTATTTCAGCAAGTTGTGAAGATCACACGCTTGCCACTGTTAAACCCAGAGAGAGCTGTTTTTGAAATGACCACAGATTTGAAAATAGGAGCTGAAACGTTCTCTATCTCTTTGACTGCCGACCCCACAATGTGGACACACACTCAGCTATGTAAAGGTCTTGTCTGTTTGTGTTTTCCTATACATTCCTCCCTTGACAGTTATTAGGGACCTGTAGACCAGACCGTCCACACCTGAACAAGTATTCTATCTAGGGTTATTCCTTAAATGATTGTGATCTTATTAATATAGTATTCTAATTATATGACCGTaatcctgtgtggctcagttggtagagcattgtACTTGCAAAGCCAAGAGTTGTGGGTTTCGATTCACACTGGGGCCACCCATAAGTTAAATGTGTATACCACATGACTGCAAGTTGCTATGGATAATTTCTGCTAAATGGAATGtatgatacattatattattGATACATCTCCCATATTCCATTACCTTATTTTGGTTAGGTGAAAATGTATATCTAAACCGTGTGTTATTGTATTCCACAGGCGTGGAAGGAGATGAATGGGGCAAGTTCTTACACACCAAAAATAAGATCTACACAGACGTCAGTGAAATCAGGCGGGAAAATGAAACTGAAAGAATTTCGGGTACTGACCAGGGGATCAGTGATGAGCCTATTCACCTGAAGATCTTCTCTCCTAATGTGGTGAACCTCACTCTGGTGGATCTACCCGGCATCACCAAGGAGGACACTGGCGGTGGTGACCAAGCTGGACTTGATGGACGCTGGTACTGATGCTATGGACGTCCTAATGGGCCGGGCCATCCCTGTCAAACTGGGCCTCATCGGAGTGGTCAACAGGAGTCAGTTGGACATCAACAATAAGAAGTCGGTGAGCGATGCCATCCGAGATGAACATGCTTTCCTGCAGAAGAAGTATCCCTCTCTCGCTAATCGAAATGGAACCAAATATCTGGCCAGGACTCTGAACAGTCTGGCGTCAATCACTCAGCAGATAGTTTAATCCATAACATACTGCATCGAGTCTAGTGACCTTCAACCCGAGTGTCACAAGCAGAACACTGGAAATCATGTGTATTACAGAAAGGTTACTGATGCACCACATCGGAGACTGTCTACCGGAGCTGAAGACGCGTATCAACTTGCTGGCGGCCCAGTACCAGTCTCTGTTAAGCAGCTACGGCCAGCCCGTTGAGGACCAGAATGCCACCCTGCTGCAGCTCATCACCAAGTTCGCTGCGGAGTACTGCCACACCATCGAGGGCACGGCCAAGTTCATTGAGACTGCCGAGCTATGCGGTGGTGCTAGAATCTGTTACACATTTCACAAGACTTTTGGGCGAACTTTAGTCAGTGGATCCCCTAGGAGGTCTCGACACCATAGATATCCTGACTGCCATCAGGAACGCCACTggcCCTCGCCCTTCTCTGTTTGTGCCCGAGGTGTCGTTTGAGCTGCTGGTGAAGAAGCAGGTGAAGAGACTGGAGGAGCCCAGTCTGCGCTGTGTAGAGCtggtccatgaggagatgcagaGGATCATCCAACACTGCagcacacagGAGTTGTTGAGATTTCCAAAGCTCCACGATGCCATAGTGGAAGTGGTCACTTCTCTGCTCAGGAAAAGGCTGCCTATCACCAATGAGATGGTGCATAATCTGGTGGCCATTGAGCTGGCCTACGTCAACACCAAACACCCTGACTTTGCTGATGCCTGTGGGGTCATGAACAACAACATAGAGGAGTCGAGGAGAAACCGAATGAGAGAGCTGCCCACTGCAGTCCCCAGGGATAAGGTAACTAACTAACCACCATACTCTGAATCTCTTCTATAATACTCCAAACAAAATGGCTCCCAAGCTCAATTTCTCCAGCTCTCTTTAATCGCAATATAATACCAATTGTCCCTGGTCTTTTCTTCTTTACCTCTCCTGACTTCACAAGTcccttctcattcctcctctcttctcttccctttaGTCAGTAGTTAATGGTCCAGTCGGCCAGCTTCCCATTCCTACCGAGCCCCCTGCCTCTGTGGACACGGAGGGTGCCAAGGTGGGGCATGAGATGGGCATGCTCTGTGCTTCCTGCTGTGCCCTACTCAGTCTGCTCCCCAGTCCTCATGCCCTCTCTTAACAATGtcctctctgccttctccctctcgGTGCGCTTGAGTTTGGCTCTGAATTAAATAGATTGGTTTGCATTGTGATTCTTCAAAGCACCTTGAGGCACAAGTTGCTGTAAAAAAATGGCTTTACATCTgattgtttgtgttgtgtgtgtgtgtaacctcagGCTCCCGGAGCAGGGCCCCAGGGGGACCAGGAGGGGACAGGGAACTGGAGAGGCATGCTGAAGAAAGGGGACGAGGGGGCCCCCACCTCTGGCCCCTCCAGCCCTCATAAGGGTCTTCCTGTCAACCTGCTGGATGTGCCTGTTTCCGTTGCCAGGAAGTTGTCTTCTCGGGAGCAGCGTGACTGTGAGGTCATCGAGAGACTCATCAAGTCCTACTTTCTCATCGTTCGGAAAAATATCCAAGACCGGTGCTTTCTGacgctgtccctctctctttgggaaagaggatacctagtcagttgcacaactgaatgcattgaaCCCAACCCCTCTAAATCAGAGAGGGGGTTGCCTTAATCAACGTCCACAGTacccagggagcagttgttgtttggGGTTAACTGGCTTGCTCAAGGACAGAGCTGCAGATTTTTTTCAACCTtgccggctcagggatttgattaaaggcccaacactcttaagcgctaggctacctgccaccctttgTATTTCTGTGCAGTGTTGAAGTCTAGAGGTATTTGCTCCCATTAGGCCAGCAGCtcagatttctctctctctccctccctccctcttccgtaCAATAGCGTGCCCAAGGCAGTGATGCACTTCCTGGTGAACCATGTGAGGGAGAGTCTGAAGAGTGAGCTGGTGGGTCAGCTCTATAAGTCTGGTCTTTTCAACGACCTCCTCACTGAGGCTGCAGACATGCTAGAGGCTCTGCAGAAGGCCTGTCAGGTCATTGCTGAGATCAGAGAGACTCATCTATGGTAAGGAGGAGAACTCCACTGAAGTCAATCTGTAATCTACTCATCATGTCTGGAAGACTTGGGATTTGCCAATATTAAAGTGCACTGTTGCGGTTCACGGAAGTGTGTTTATACATGGTACTAGCTCACAGCTATGTTAAGGCTAAATACATATCATCGCTCACCTGTGTAAGAAACCGATACCTCATTAAGACACATCTGTGCTGTGTAGTTATAACCAAGAATGTTTGAAGGCCAAACTTGTCCTGTCTTCAGCTGTCCGTGTGTAACACAACAGGGAGAGATTGATGGATCGTTCTTTCTGTAGCCTAAATCAAAGCTGAAACTCAAACCTCAGTTTCAAACCCTCTCCAGTTCCCGTAAATTTGATACTCCCATCCCACATTGTTTATGAAAATGTATAACACTCCAAAATATACTGTAACCCTGAATATCTTTATTTGTTAAATGTATTTTAAGTTCTAATGTCAATAGCACTGGTGCCGCTTACTATGTCATTTTATGTCTACAATGTGCGGGCAATATGTGGTGCATCACTTACGTGAAAAAATACAGGAATTTCACATGTGTGAAATGTCATAACATGTTAAACATGTTAAATACATGTGACAACATTGTCTCATGTTAAATACATGTGACAACATGGGGATGCAAAATGTGATTGTGATACCATTAACATTTTAGCATGTGAAAACCCAGGTGTCAAATGTCATTGCTTTAAAAAGCATTATTGAAATGAAACAGTTCCGGTTTGCTCCAGAGATTTTTACTGCTAAGTGAAAGTGTTAACATTAAAGGACAGTATGCTGATTACCTGGGAATCaacctcacctgggatttgaactcacaacttcTTGGTTGATAATTAACTGAAGTTTGTGCTGCGCCACCAGGTCTGTGGACCTATGGGAGATTGACTATGCATAcacggagtataccaaacattcggaacaccttcctaatattgagttgcagcccccccccccccccccccgccctcagaacagcctcaattcgtcagggcatggacttagtgatgctggcccatgttgactccaatgctccccacagttgtgtcaagttggctggatgtcctttgggtggtgaaccattcttgatacacacaggtgtggaacccagcagggttgcagttcttgactcaaaccggtgcgcctggcaccttctaccataccttgttcaaaggAACTGAACTATTTCCTCTTACCCTCTGAAGGGCACTCATACACTCATACACaagccatgtctcaattgtctcaaggcttaactccttcgttaacctgtctcctcctcttcatctacactggttgaagtggatttaacaagagacatcaataagggatcatatctttcacctggtcagtctgtcatggaaagagcaggtgttcttaatgttttgaaaACTCAGTGTATATTGGCACGAAAAATGTGTTGCACTTTGCCTATTTGTCGAACAACTTGAAGGTGTTATTTCTAATAAAATGACAGTATGCTGCTGTATTCTGA

Function

NR:

description
dynamin-1-like protein isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110490250 False 3429 mRNA 0.46 17 50358439 50372219
TU1486590 True 4744 TUCP 0.46 14 50359210 50372207

Neighbor

gene id symbol gene type direction distance location
LOC110490251 LOC106609232 coding upstream 624 50354835 ~ 50357815 (+)
cdkn1d LOC106576064 coding upstream 24985 50321349 ~ 50333454 (+)
LOC110490239 NA coding upstream 172314 50182820 ~ 50187125 (+)
LOC110490236 LOC106609240 coding upstream 188174 50161944 ~ 50170265 (+)
LOC118938923 NA coding upstream 334611 50019617 ~ 50023828 (+)
LOC110490256 LOC106576072 coding downstream 188796 50561015 ~ 50577585 (+)
LOC110490263 LOC106576079 coding downstream 803829 51176048 ~ 51199225 (+)
LOC110490740 LOC106576082 coding downstream 844688 51216907 ~ 51273536 (+)
LOC110490269 LOC106609207 coding downstream 931783 51304002 ~ 51323443 (+)
LOC110490270 LOC106576086 coding downstream 965850 51338069 ~ 51349846 (+)
G1303108 NA non-coding upstream 14530 50341772 ~ 50343909 (+)
G1303097 NA non-coding upstream 52217 50305647 ~ 50306222 (+)
G1303024 NA non-coding upstream 74260 50284000 ~ 50284179 (+)
G1303020 NA non-coding upstream 119365 50232428 ~ 50239074 (+)
G1303040 NA non-coding upstream 127815 50223183 ~ 50230624 (+)
G1303152 NA non-coding downstream 76260 50448479 ~ 50448734 (+)
G1303357 NA non-coding downstream 152674 50524893 ~ 50525189 (+)
G1303412 NA non-coding downstream 208872 50581091 ~ 50581245 (+)
G1303422 NA non-coding downstream 212604 50584823 ~ 50585207 (+)
G1303428 NA non-coding downstream 224871 50597090 ~ 50597300 (+)
G1303095 LOC106609233 other upstream 56088 50301445 ~ 50302351 (+)
G1303015 NA other upstream 179874 50178274 ~ 50178565 (+)
LOC110490228 NA other upstream 948126 49398275 ~ 49410313 (+)
G1301706 NA other upstream 962581 49395223 ~ 49396921 (+)
G1301458 NA other upstream 1427851 48930046 ~ 48930588 (+)
G1303641 NA other downstream 375143 50747362 ~ 50747715 (+)
G1303804 NA other downstream 699606 51071825 ~ 51073294 (+)
G1303950 LOC106576084 other downstream 927184 51299403 ~ 51299761 (+)
atxn7l1 LOC106576087 other downstream 979174 51351361 ~ 51382579 (+)
LOC110490271 LOC106576088 other downstream 1023753 51386269 ~ 51404401 (+)

Expression


Co-expression Network