LOC110490266 (LOC106609208)


Basic Information

Item Value
gene id LOC110490266
gene name LOC106609208
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 51289611 ~ 51301497 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021563562.2
GGGACTCTGCTTCACACATAACAGGGAGGGGTGAGTGGAATAGCCGACAGAAAGTTTTAGTACCACTTCATCGGACTCAACATGAACTACGGAGGAACTGGGATCATTGTACAATTATTTACAAATGCCTAGTCACAAACCGTGTCATATTTCTGCTGGCGTTAGTGTGTTTAAGTCTACTGAGCGATAACTCGTGTTATGGAACAGCAAGTGAGCGATGAAGAAGAACCTCAACCTGTAGTCCTTAGAGAAGAGATccggaggaggagaagaaagatgAAAGCCTTCACCTCCACCTTCTCTGTGGCCGTGGACCAGATAGCCGTCGAGTTcgtcctccccaccaccacaaagAGTAGCCGCAGCCCGGACACCTTGCTCCTGGAGGTGGCTGGGAACTGGACGGTGGAGCAGGTGAAAGCCCAGGTGTGGCTGAGGGTAGTAGCCACCAACCTGTGCCCTGAGTTCTACCAGAAGTACTCCCCTGACCACTGCATCCTGCTCTACCAGAAGAAGGGCAACTGGTGTGAGATCTACGATAAGCACCAGGTGTTTCAGACCCTGGACTGCGTCCGCTACTGGAAAGCTCTGAAGAAAGATGTGGGGAAGATCCACCTGACCTGCCGGCCTCAGCCCTCCGAGGAGTCCACACAGTACCAGAGGTACCTCAACTACCTGATTGGCTACGACGTCACCGACGTCAGCAACGTGCACGATGACGAGCTGGAGTTCACCCGGAGGAAGCTCCTCACACCCCGCAAGATCGAGCTGTCCGACCGGGACCCCAAACTATACTCAATGGACCCTTGGATCACATCCAAGCACCTCCCGGAGTACCTGCTCACCAAGGTGACCAACAGCCACATCCTGCTGGTCATTCACAGGAACAAGGCCAGCCAGACCATCAAGGTGTCCATCGACGACACGCCGGTCCAGGTGCTCCAGACCTTCTTTACCAAGATCTCCAATAAGAGGGCTCTGCTGGGAGTTCCCGAGGATGTTTGTGAGGCAGACTACGTCCTGAGAGTGTGTGGCAGGGAAGAGTATATCTATGGGAACCACCCGGTCAGGGACTTCCACTGGGTCCGACAGTGTCTGAAGAACGGAGAGGAGATCCATCTGGTTCTGGAGTCGGCTCCTAATCCGGGTCAAGACCTAGTCCAGAGAGAGGACTGGGCACAGGTGGATGACTGTACTGGAGTGGCAGGCACCCATGAGCAGCTGACGATCGACGAGAAAGACCACGAGCGGGtctacaccatctctctgtgGGACTGTCACAGGAAGTTCAGGGTTAAAATCCTGGGCATAGACATCCCGGCTTTGCCGAGGAACCCAGAGCTGATCGTGTATGTGGAGGCCAGTATCTTCCATGGCCAGCAGCTCCTGGCTCAGGAGAGGACCTCCTCCAAGGCTTTCACTGAGGAGGTGCTGTGGAACGCCTGGCTGGAGTTCAATATACGCATCAGAGACCTGCCCAAGGGGGCTCGCCTCAGCCTACAGGTGTTCTGTGGGAAGGCCCAGACCCAGATCTCTAAGGGCACCTCCTCCTACCAGGACAACGGAGGATCCCCAGGTGGAGGTGGCAGCAGCAGCCATGATGGTAGCAAGACTAAGAATCGTCTCCTGTACTACGTCAACCTGCTGCTGGTGGACCACCGCTCGCTGCTGCGCCAGGGAGAGTTCATCCTCCACATGTGGAAGATGCCTGAGAAGACCGAGGACAACAGCAGCGTCAATGCAGACAAGCTGACCTCAGCCACCAACCCAGACAAGGCCTCCTCCATGGCCGTAGCCATCCTGCTGGACAAGTACTGCTACCCAGTGGCCCTGCCCAAGAGCAGGGAGGGCAAGGCTGCTGGGGGGGAGGGTCGGGAGgccgagggaggggagagggggcaaAGGGAGATGCCTAACCACCTGAGGAAGCAGTTTGAGGTAATTGTTGAGACCGATCCACTGCACCCTCTCAGccaagaagacaaagagctgctGTGGCACTTCAGAGAGGAGTGTATGCGTCACCCCAGGGCATACCCcaagctgctgggctctgtgctGTGGGGTAGACAGGAGGCTGTCCTGGCCACTCATAGGCTGCTGGAGAGGAGCTCTGTGTGGGACCGTAGTGTGCTGGATGTGGGCCTGGCCATGCAGCTGTTAGACTGCCACTACTCTGACGCTCACGTCCGCTCCATGGCAGTACGCAAGCTGGAGACCCTGGGGGACGACGACGTCCTGAGGTACCTGCTGCAGCTGGTCCAGGCTGTGAAGTTTGAGCCGTACCATGACAGTGCCCTGGCCAGGTTCCTGCTGAAGAGAGCTCTCAGGAGTAAGAGGATAGGTCATTTCCTTTTCTGGTTCCTGAGGAGTGAGATCGCCCAGTCCATGCACTACCAGCAGAGGTACGCTGTGCTGCTGGAAGCCTACCTCCGAGGCTGTGGAGAGGACATGCTGCAGGACTTCAGACGCCAGGTGGAGATGACAGAAGCCCTGCAGAAAGTCACCAGGGAGATCAAGGCCATGTCTGCTGAGAAATATGATGTTTCTGCACAAGTTGTGTTCCAGCTGCGTCAGAAGCTGGAGAACCTGCAGACGTCTGGGCTGCCAGAGAGCTTCAGAGTGCCCTATGACCCGGGTCTACGGGCTGGTGCTCTGGTGATAGAGCAGTGTAAGGTGATGGCCTCTAAGAAGAGACCGCTGTGGCTGCAGTTTAAGAGggctgaccccaccaccctgtccAGTGACACCATCGGGGTCATCTTTAAGGACGGGGATGACCTCAGGCAGGACATGCTCATTCTACAGATTCTGCTGATCATGGAGTCCATATGGGAGGAAGAGTCTTTGGACTTGTCCTTACTGCCCTACGGCTGTATCTCTACTGGGAATAAAATAGggATGATTGAGATAGTGAAGGATGCCACCACTATTGCCAACATCCAGCAGAGTGTTGTGGGAAGCACAGGAGCATTCAAGGACGAGATCCTCAACCAATGGCTGCGGGACAAGTGTGTGAGCGAGgaaaagtTCCAGCAGGCGGTGGAGAGGTTTGTCTTCTCCTGTGGAGGGTACTGTGTGGCCACCTACGTGCTGggggtaggagacagacacaaCGACAACATCATGATCACTGAATCTGGTAACCTGTTCCACATAGACTTTGGCCACATACTGGGGAACTATAAGAGTTTCCTGGGTATCAGTAAGGAGAGGGTTCCCTTCGTCCTCACCCCTGACTTCCTCTATGTCATGGGCACATCAGGGAAGAAGAGCAGCCCACACTTCCAGAGGTTCCAGgaTGTGTGTGTGCGGGCCTACCTGGCTCTGAGGCATCACACCAACCTCCTCGTCATCCTGTTCTCCATGATGCTGATGACAGGCATGCCTCAGCTCACCAGCAAAGAAGACATTGAGTACATCCGCGAAGCGCTGACTGTGGGCCGGCCGGAGGAGGAGGCACAGCGCCACCTGCTGGACCAGATAGAGATCTGCAGGGACAAGGGCTGGACCGTGCAGTTCAACTGGTTCCTACACCTGGTGCTGGGCATCAAGCAGGGGGTGGATAAACGCTCGGCTTAGGGGGCTCCCCTTGTGGTGCCAATGGCTTAGTGGGCTGGCAGCACCAGTGTGATGGGTTCGAATCCCACAAAGGCCACATGTGATAACTGTAAACCACTTTAGGTACAATTACTATGTTGATTAGACTCCCAAATAAGGAGAGGTAGATATAGTCAAAGACCAAAGTCTGGTTCTAAAAGTTTGTCAACCCTTCTCAATGATGTAACCAGCTGTTCCAATACATTACTCATTGACTGTACCATggactgtatacagtaccagtcttaTTTTTGCACTTTCAAGATCAAAACCTGATCTTACCATATGTTTATGAGTTATACATAAATATTGACTCCTGTTCGCTTCCTAATGCACTGAATCCGATTGTATCATCTGTTAGTATAACATCAGACTTGCATGACTGATGGTGGCAATACCATAATAAACCTGATCGTAGAGAAATATAGTTATACATGACCTCCCGTCGCTAGAGGGCGACATGCAGATTTTAAACTGAGTGACTTACCAACACCATCAGAGGAAGAGGTATCTAGGAAACCAAAGGAAGCTTTTCCACACCAAGcctctctccatctctcaggtCTTTGGTATGGGGATGCGGTTGCAGCCTCGGTGTCTGCAGCTGGACTCCGTACTGCAGACAGTGAGTGTCCTGGAGGCAGTGATCCGGAGGAGCTTTGGTCCTGATGGAGGACAGGTGCTGTTCACACGGGACACGGGGCAAACTCTGCTGACACGCCACGGAACACGCATCCTCACAGCCCTGCGGGTGGAACACCCGCTGGCCAGgatGGTGGTGGAGTGTGTGAGGAGACACAGCTCGGTGACAGGAGATGGCTCCAAGACCTTCGTCCTGCTGCTCGCCTCATTGCTACGGGAGATACAGAAACATACCCGAAAAGCCCGCCAGGAAGGCGCAGGCGCC

Function

NR:

description
phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform-like

GO:

id name namespace
GO:0046854 phosphatidylinositol phosphorylation biological_process
GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process biological_process
GO:0048015 phosphatidylinositol-mediated signaling biological_process
GO:0030593 neutrophil chemotaxis biological_process
GO:0005886 plasma membrane cellular_component
GO:0005942 phosphatidylinositol 3-kinase complex cellular_component
GO:0035005 1-phosphatidylinositol-4-phosphate 3-kinase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0046934 phosphatidylinositol-4,5-bisphosphate 3-kinase activity molecular_function
GO:0016303 1-phosphatidylinositol-3-kinase activity molecular_function

KEGG:

id description
K21289 PIK3CG; phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021563562.2 True 4507 mRNA 0.54 18 51289611 51301497

Neighbor

gene id symbol gene type direction distance location
LOC110490268 LOC106576083 coding downstream 2465 51280478 ~ 51287146 (-)
LOC110490265 LOC106576097 coding downstream 9431 51274831 ~ 51280180 (-)
LOC110490264 LOC106576080 coding downstream 83684 51199223 ~ 51205927 (-)
LOC110490262 LOC106576078 coding downstream 124415 51152066 ~ 51165196 (-)
c15h12orf56 cssa17h12orf56 coding downstream 140368 51126735 ~ 51149243 (-)
LOC110490744 LOC106576129 coding upstream 483991 51785488 ~ 51793354 (-)
LOC118936382 NA coding upstream 515611 51817108 ~ 51819851 (-)
LOC110490745 LOC106576126 coding upstream 826490 52127987 ~ 52131038 (-)
LOC110490277 LOC106576111 coding upstream 877922 52179419 ~ 52183904 (-)
LOC110490278 LOC106576113 coding upstream 891565 52193062 ~ 52203096 (-)
G1304413 NA non-coding downstream 15181 51273438 ~ 51274430 (-)
G1304355 NA non-coding downstream 114600 51174772 ~ 51175011 (-)
G1304352 NA non-coding downstream 119689 51169334 ~ 51169922 (-)
G1304342 NA non-coding downstream 137895 51151516 ~ 51151716 (-)
G1304302 NA non-coding downstream 233153 51051493 ~ 51056458 (-)
G1304426 LOC100380855 non-coding upstream 2498 51303995 ~ 51315870 (-)
G1304430 NA non-coding upstream 10514 51312011 ~ 51312442 (-)
G1304464 NA non-coding upstream 77963 51379460 ~ 51382461 (-)
G1304539 NA non-coding upstream 216760 51518257 ~ 51519053 (-)
G1304570 NA non-coding upstream 269880 51571377 ~ 51572035 (-)
LOC110490244 LOC106609225 other downstream 988604 50290050 ~ 50301082 (-)
G1302602 NA other downstream 1625315 49663951 ~ 49664296 (-)
si:dkeyp-27e10.3 LOC106576037 other downstream 2450460 48822973 ~ 48839311 (-)
celsr1a LOC106576003 other downstream 3585573 47584674 ~ 47707520 (-)
G1304896 LOC107662719 other upstream 619998 51921495 ~ 51922528 (-)
G1304988 NA other upstream 688214 51989711 ~ 51990173 (-)
LOC110490288 LOC106609184 other upstream 1505486 52630838 ~ 52809711 (-)
G1306232 LOC106576137 other upstream 1753352 53054849 ~ 53062280 (-)

Expression


Co-expression Network