etnk1 (LOC106609326)


Basic Information

Item Value
gene id etnk1
gene name LOC106609326
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 53528016 ~ 53548231 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021563618.2
TTTATGGGTGGGATTTTCTGAGAGGCGTTGCCGCACTAGAAGCGAGTAGATTTTTAACCTCCGCAGCCAAGCAAGAGTTCATACAAACGCATTTGCAGCCGCCTACAGTGAACTTCTTGTCAATTTAATCGGAACCTTTCATTATGGCCAACTACATTCATGTACCCGACGAGGCGCCCGCTGTACCCAAAATAGATGTCACATTAGACGAGAACGATTACAGATCTGGTGCATTGAGACTAATCAAGGAACTGAGACCGTTCTGGAAACCATCCGAGGTCAAAATGAAGTTCTTCACAGATGGAATCACCAATAAGTTGCTGGGCTGCTATGTGGGCGGGGTCATGCAGGATGTGGTCCTGGTGCGTATCTATGGCAACAAGACGGAGCTGTTTGTGGACCGGGAGAACGAGGTGAAGAGTTTCCGGACGCTCCACGCACACCGCTGCGCCCCTCGTCTCTACTGTACCTTCAACAACGGCCTCTGCTATGAGTTCCTACAGGGCCAGGCGCTGGAACCTGAACACATCCGCAGCCTGCCCACGTCCAGGCTCATCGCGAGGCAGCTGTCTAAGTACCATGCCATCCATGCTCACAACGGATGGGTGCCCCAGTCAGACCTGTGGCTGACCATGGGCAAGTACTTCGCCCTGATGCCCAAGTTCTTCCAAGACCCAGAGATGAACATGAGgTTAAACAGTGAGGTGCCTAGTCGAAGGCGACTGAGGGAAGAGATGGTGTGGATGCAGCAGAGTCTGTCTGTGCTGGGCTCTCCTGTAGTCCTCTGCCACAATGACCTGCTGTGTAAGAACATAATCTATAATCAGCAAGGAGAAAATGTCAAGTTCATTGACTACGAATACGCTGGGTACAATTACCAAGCCTATGACATTGGGAACCACTTCAATGAATTTGCAGGCCTGAATGAGGTGGACTACAGCCACTACCCAGAGCGGAGTTTGCAGCTGCAGTGGCTGCGCTCCTACCTGGAGGCCTATAAGGAACACAAAGGTCAAGGGTCAGAGGTCACTGAGACAGAGGTGGAGGTGCTCTACGTACAGGTCAACCGCTTCTCCCTGGCATCTCATTTCTTCTGGGGCCTATGGGCTCTGATTCAGGCCGAGTTCTCCACCATTGATTTTGACTTCCTGGGATACGCAGTCCTTCGCTTCAGCCAGTACTTCAAGATGAAGCCAGAAGTTGCAGCGCTGAACTTTCCAGAGTAAAAGTCCTTCTCCCTATCTGGTCCTCATGTCCACCGTAGAGTGCCCTCTAGGGGGTGTCGGAAAGAAGACCCGGAGAGAGCGCAGTCCACGCTTCCTGTGGATTTCATTCGGGCACTCACTAGAGACTCATAGAACCCTATGGGAACTCATAGAACCCTATGGGAACTCATAGAACTATATTAGAAATATAACTATATTAGAACTCATAGAACCCTTTTGAGAACTCCTAGCTGTTAGAAACCATGACTCACCATCCACTGACACTCCACAGGGCCTATTCCATAGCATCACTGCTACAGACAGATCCCTACCTAGTTCGCTATAGAAGCCTAGAACCATGCACTTCTTCATAAAGACTAAAGTCTTTCAGACCCAGTCCTCCAAAATGTCTATAAATAtgcaagaagaagaaaaagaaaaggaaaaaaacTATCATGGCTATTTTTTTGTTAAGATCAACCAAATGAAAACAGTGCCATGTAATGAATGGCGAATTCAGTGTGACATTCCAGTAGCATCTCTCACCCCAGTCTGTGCCCGTCCACAGGGGTAACTCACAACAGAGGAGACCCGGACCAACTCTGGAACTTGTCTCCTGTGTTGTGCTGCTGACTGACTGGGAATATTAGTGTGTGTGGGCTCACTCCAAGCCATTCCTATTGGATATATATACATCTCTTGTCTGGGCTCGCTGGCCCACTGATTATTTAGTCACCATTATATCGGTTGGTTTAATGGTAGGCTACGTAGCAAGTTACAAATATGTGTTGGTGCATCTGGTATAGTCACCAATGTATATTTGTCGGTCGAATGGTTAGATTCACTTATGTACTGTCTCCTAGGTAACAAACAGGAGTGCCTCCATCTTGTTTACATTCTGTTCACCTGACTGAAACGACGTCCGCTTCCCTACCGTAACTGGGCTGTAGTTTGATTCGTGGGAAATGTTGTCGTCATGATGACGGCCAGGAGTATTTCCTGGAAAAACCCTGACCAGGAGAAACTCTGGGCCTGTGGCCTTGTGGTCCGGAAACCCGCCACGCCCTAGTCATGACTATGTTATGTTCACTGTATAAAGTCATTTAGATTCACTTTGAGTTTTTTTTCATGTAACCTCATGGGGCAGTTGCATTTGCCTCGACtcagcctagtcctggactaaaaggcACTTTCAATGGAGAGTTGATGTTCAATGGCGTCACCATTGGAAGTGATTTTAAGTCGAGGATTATAGGCGTCACCTGGTTTATTGTTGCCAGGCTACCCATCCACAACACTCCGGCCAACTGAAGTTTCTTCTCCACGATGAGTGTGGATTTGCTTCCCTCCCTAATGATTTCTAGAATGAGAAGGTATTCTGaccgttctgattggtcccagaaactgaTGGGTTGGGCCAGGTCCGGGCCTACACGGATGACGTTATCAACTTTGCTACTGGTGAGATTTTGTTAAGACGATTCAATCGCTGATtaatttgttttgtacaacgccCCTCATTTTGAAGTCACACAGACAACTTCTAGGATGGCAGTTTCAGACTGAATGTATATAGCGATCGACAGAGCAGCGGAATGAAATTTGGGGTGAATTGTCTGACAAGGTTTACTGCAACTGCCTGTGAGACAATAGAGGTAAGACCTATGATTGGAGGACCAATGGCTTTGGTAGCGAGTGTCTTTGAAAGACATGTATCTTTGTCTGAAAGTGTCTAACAGTATAGTACTTGTCTTTGTTTGTTTATAATGTATGTGCTGCTTGGTTCTGGAAGTTCTTTACGACAAAAAGTTCATCTAATAGGTAAAAACCAACCAATACCAAAGTGCTGATATTTTCTTTGCTTGCACATAATTGCACATTGTATTTTTCCATTTCCGAATGATAATATTGATAATGTACAATATTTACTTTTTAAAGTGCAGTTTTATACCCATTTAAGTGAAGAACTGTTTTCTGACTGGGAGGTCTTGGAGAGTATGTTAGGAGTGTGTTAAAACTGCTTCAACGTTAGTCAGGGCAGGTCTGTGCGGTCACTGTACCTGAATGAAGAGACCACCTTGATAGGCTgctgaaatagcaccctattccctacatggtgcactacttttgaccaggtcccatggGGTGAAgtgtatagggaatatggtgccatttcggATATATAGACCGACTATATATTTTTCCATTCATACTCAGCACTTCCATGCCAACGGTATCAGTCTGCAGACTTGCAGCCGGTGTCCTATGGGTTGCTAGCACCTGTGAGAACTGCATTTCAAGGCACCTTTCAGGAAGCGACTGCGAGTCTGCAGACCTATGCCTCTCCCAATATCCTACTGTTGCTCCTGACCTGTGCAGCCCTCTGCATGTTTAGTTAACCCCATCTACTGTAGCGAAGAAACCACAAACTGGGAAGTCGGACAGGAATCACGGTATATGCCTGTCTTAACTGTGTTCACTTTTTGTTTTGAGCATGCCTTTTATTTTGATGTGGCTTTATTTAATGATAATCAACATGTCTGTTTTCTGGGTCTGTGACTGCAGTGTCTGAGATGGTAGGACTATGTTCCTTCACCGGGGAAATGGAGGACGGGTCAGAGATTGGTTGTTGTTGATCAGATCCTAACTTGAGATGTGTTGTGCGCTAAGTTACTCAACTCTTGTGAATGTTCTCTACTGACATAAGTGCATGGATTTTTGAAAAGGTTTACTTTACACTTGACTCAAGTTAGTGTTGTCCTTTTAGAATTATGTTTGTGTGTTGTCCTCTTGTCTGCAGACCTCGTCATGTTTTTAACCACACAGGGTCCACAAATAGTGCTGATATATACTGTCGCCTACATGTGCGCTATAATGTTAAAAAGGAATCATAAACACTCCGTAACGCAAGTCTGTTTCCCTGTTGAGTttcattctgaaatcaacacaagaccactgtaaaaaaaaaaaaaaaaagcttgtgAAAAGCAACAACACTCAGCTTGACTCAATACTGGTCTGCTTCTTTAAAATGTGTATAAATGCACTCCATTATTTCTTCTCTGGCATTTGTAGCATATGTGTATATGTACATTTCAAAATCAAATGTAATATCTCTGCTTGAACTGTCAAATGTGAATGACTGTACATAGGGGGAGTTTTTTTTTTCTAAACATTGCTCTAACGTCAAGTAGTCTTTTTGTTTAACTGTGAAACGAGCAGACTTTTGAATACTGTACACAAGTGCTTTGAAAGAAGATTAAAGTCTATTACCCTGTCCTGTT
>TU1491240
TGAATGGAACCCTCATGGAAAGCTTGATTTTTTTATAGCTAACTCATCTGGCTATTATATAACATGACAACCACTGTCATGACCACGCTAGTCAGAGGAATCAGCTAAAGCACATTTACCTGTTTGGGACCAGGCGAACTGCATGTCTGCATCAATTaggcctgtatgtctgtctgtctgcccactTTCTATGTGTCTGCATTTGTGTCAACTTCGTTTTTCTCGAAACATTCTCACTTCCCTTCAAAATGCAAACTCTTACTCCTCCACCCCAGAGGCCTACAGTATTTCCAGTAGGTTGTCAGTGAGGCATCAGAACCacttagactagagagagggatgataatGGGTTAATAATGCACAGCTTTATCATTAATAATGTGACGGGTCTCTGTCCTGTACTAATCAAaccttcctctctctgcccctttcaGAAAATGTCAAGTTCATTGACTACGAATACGCTGGGTACAATTACCAAGCCTATGACATTGGGAACCACTTCAATGAATTTGCAGGCCTGAATGAGGTGGACTACAGCCACTACCCAGAGCGGAGTTTGCAGCTGCAGTGGCTGCGCTCCTACCTGGAGGCCTATAAGGAACACAAAGGTCAAGGGTCAGAGGTCACTGAGACAGAGGTGGAGGTGCTCTACGTACAGGTCAACCGCTTCTCCCTGGCATCTCATTTCTTCTGGGGCCTATGGGCTCTGATTCAGGCCGAGTTCTCCACCATTGATTTTGACTTCCTGGGATACGCAGTCCTTCGCTTCAGCCAGTACTTCAAGATGAAGCCAGAAGTTGCAGCGCTGAACTTTCCAGAGTAAAAGTCCTTCTCCCTATCTGGTCCTCATGTCCACCGTAGAGTGCCCTCTAGGGGGTGTCGGAAAGAAGACCCGGAGAGAGCGCAGTCCACGCTTCCTGTGGATTTCATTCGGGCACTCACTAGAGACTCATAGAACCCTATGGGAACTCATAGAACCCTATGGGAACTCATAGAACTATATTAGAAATATAACTATATTAGAACTCATAGAACCCTTTTGAGAACTCCTAGCTGTTAGAAACCATGACTCACCATCCACTGACACTCCACAGGGCCTATTCCATAGCATCACTGCTACAGACAGATCCCTACCTAGTTCGCTATAGAAGCCTAGAACCATGCACTTCTTCATAAAGACTAAAGTCTTTCAGACCCAGTCCTCCAAAATGTCTATAAATAtgcaagaagaagaaaaagaaaaggaaaaaaacTATCATGGCTATTTTTTTGTTAAGATCAACCAAATGAAAACAGTGCCATGTAATGAATGGCGAATTCAGTGTGACATTCCAGTAGCATCTCTCACCCCAGTCTGTGCCCGTCCACAGGGGTAACTCACAACAGAGGAGACCCGGACCAACTCTGGAACTTGTCTCCTGTGTTGTGCTGCTGACTGACTGGGAATATTAGTGTGTGTGGGCTCACTCCAAGCCATTCCTATTGGATATATATACATCTCTTGTCTGGGCTCGCTGGCCCACTGATTATTTAGTCACCATTATATCGGTTGGTTTAATGGTAGGCTACGTAGCAAGTTACAAATATGTGTTGGTGCATCTGGTATAGTCACCAATGTATATTTGTCGGTCGAATGGTTAGATTCACTTATGTACTGTCTCCTAGGTAACAAACAGGAGTGCCTCCATCTTGTTTACATTCTGTTCACCTGACTGAAACGACGTCCGCTTCCCTACCGTAACTGGGCTGTAGTTTGATTCGTGGGAAATGTTGTCGTCATGATGACGGCCAGGAGTATTTCCTGGAAAAACCCTGACCAGGAGAAACTCTGGGCCTGTGGCCTTGTGGTCCGGAAACCCGCCACGCCCTAGTCATGACTATGTTATGTTCACTGTATAAAGTCATTTAGATTCACTTTGAGTTTTTTTTCATGTAACCTCATGGGGCAGTTGCATTTGCCTCGACtcagcctagtcctggactaaaaggcACTTTCAATGGAGAGTTGATGTTCAATGGCGTCACCATTGGAAGTGATTTTAAGTCGAGGATTATAGGCGTCACCTGGTTTATTGTTGCCAGGCTACCCATCCACAACACTCCGGCCAACTGAAGTTTCTTCTCCACGATGAGTGTGGATTTGCTTCCCTCCCTAATGATTTCTAGAATGAGAAGGTATTCTGaccgttctgattggtcccagaaactgaTGGGTTGGGCCAGGTCCGGGCCTACACGGATGACGTTATCAACTTTGCTACTGGTGAGATTTTGTTAAGACGATTCAATCGCTGATtaatttgttttgtacaacgccCCTCATTTTGAAGTCACACAGACAACTTCTAGGATGGCAGTTTCAGACTGAATGTATATAGCGATCGACAGAGCAGCGGAATGAAATTTGGGGTGAATTGTCTGACAAGGTTTACTGCAACTGCCTGTGAGACAATAGAGGTAAGACCTATGATTGGAGGACCAATGGCTTTGGTAGCGAGTGTCTTTGAAAGACATGTATCTTTGTCTGAAAGTGTCTAACAGTATAGTACTTGTCTTTGTTTGTTTATAATGTATGTGCTGCTTGGTTCTGGAAGTTCTTTACGACAAAAAGTTCATCTAATAGGTAAAAACCAACCAATACCAAAGTGCTGATATTTTCTTTGCTTGCACATAATTGCACATTGTATTTTTCCATTTCCGAATGATAATATTGATAATGTACAATATTTACTTTTTAAAGTGCAGTTTTATACCCATTTAAGTGAAGAACTGTTTTCTGACTGGGAGGTCTTGGAGAGTATGTTAGGAGTGTGTTAAAACTGCTTCAACGTTAGTCAGGGCAGGTCTGTGCGGTCACTGTACCTGAATGAAGAGACCACCTTGATAGGCTgctgaaatagcaccctattccctacatggtgcactacttttgaccaggtcccatggGGTGAAgtgtatagggaatatggtgccatttcggATATATAGACCGACTATATATTTTTCCATTCATACTCAGCACTTCCATGCCAACGGTATCAGTCTGCAGACTTGCAGCCGGTGTCCTATGGGTTGCTAGCACCTGTGAGAACTGCATTTCAAGGCACCTTTCAGGAAGCGACTGCGAGTCTGCAGACCTATGCCTCTCCCAATATCCTACTGTTGCTCCTGACCTGTGCAGCCCTCTGCATGTTTAGTTAACCCCATCTACTGTAGCGAAGAAACCACAAACTGGGAAGTCGGACAGGAATCACGGTATATGCCTGTCTTAACTGTGTTCACTTTTTGTTTTGAGCATGCCTTTTATTTTGATGTGGCTTTATTTAATGATAATCAACATGTCTGTTTTCTGGGTCTGTGACTGCAGTGTCTGAGATGGTAGGACTATGTTCCTTCACCGGGGAAATGGAGGACGGGTCAGAGATTGGTTGTTGTTGATCAGATCCTAACTTGAGATGTGTTGTGCGCTAAGTTACTCAACTCTTGTGAATGTTCTCTACTGACATAAGTGCATGGATTTTTGAAAAGGTTTACTTTACACTTGACTCAAGTTAGTGTTGTCCTTTTAGAATTATGTTTGTGTGTTGTCCTCTTGTCTGCAGACCTCGTCATGTTTTTAACCACACAGGGTCCACAAATAGTGCTGATATATACTGTCGCCTACATGTGCGCTATAATGTTAAAAAGGAATCATAAACACTCCGTAACGCAAGTCTGTTTCCCTGTTGAGTttcattctgaaatcaacacaagaccactgtaaaaaaaaaaaaaaaaagcttgtgAAAAGCAACAACACTCAGCTTGACTCAATACTGGTCTGCTTCTTTAAAATGTGTATAAATGCACTCCATTATTTCTTCTCTGGCATTTGTAGCATATGTGTATATGTACATTTCAAAATCAAATGTAATATCTCTGCTTGAACTGTCAAATGTGAATGACTGTACATAGGGGGAGTTTTTTTTTTCTAAACATTGCTCTAACGTCAAGTAGTCTTTTTGTTTAACTGTGAAACGAGCAGACTTTTGAATACTGTACACAAGTGCTTTGAAAGAAGATTAAAGTCTATTACCCTGTCCTGTTTATTGTTTTAAAaaaacgttatatatatatatattcccctctGAATATTACCAGTATGTTTAATTACTCTGAGCCAGAAGTATTTCCCTGTTAACCACTGCTCTACCACAAGGGTACCAGGAGATGGCGCCAAACATGATGAAATGAAAAGCCAAGCATTGTTGCGtttgtacaggtaactgccaaaataaaaacactatatccc

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016772 transferase activity, transferring phosphorus-containing groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021563618.2 False 4489 mRNA 0.45 8 53528221 53548231
TU1491240 True 4294 lncRNA 0.43 4 53528016 53536129

Neighbor

gene id symbol gene type direction distance location
lrmp LOC106576138 coding downstream 419011 53085647 ~ 53109210 (-)
LOC110490299 LOC106576137 coding downstream 465420 53060950 ~ 53062801 (-)
LOC110490297 LOC106576136 coding downstream 465906 53054846 ~ 53062315 (-)
LOC110490294 utp20 coding downstream 487564 53034589 ~ 53040657 (-)
LOC118938980 NA coding downstream 490762 53037332 ~ 53037459 (-)
aldh1l2 LOC106576152 coding upstream 6807 53555038 ~ 53576166 (-)
LOC110490308 LOC106576153 coding upstream 30608 53578839 ~ 53584339 (-)
efcab6 efcab6 coding upstream 208248 53756479 ~ 53786697 (-)
sult4a1 LOC106576158 coding upstream 240447 53788678 ~ 53817042 (-)
LOC110490327 LOC106609305 coding upstream 743926 54292157 ~ 54302557 (-)
G1306631 NA non-coding downstream 85226 53442454 ~ 53442995 (-)
G1306564 NA non-coding downstream 258085 53269687 ~ 53270136 (-)
G1306554 NA non-coding downstream 272499 53255498 ~ 53255722 (-)
G1306552 NA non-coding downstream 279521 53248191 ~ 53248700 (-)
G1306548 NA non-coding downstream 289031 53238847 ~ 53239190 (-)
G1307199 NA non-coding upstream 79402 53627633 ~ 53672203 (-)
G1307204 NA non-coding upstream 95673 53643904 ~ 53644780 (-)
G1307250 NA non-coding upstream 197040 53745271 ~ 53842233 (-)
G1307315 NA non-coding upstream 308059 53856290 ~ 53891901 (-)
G1307316 NA non-coding upstream 344072 53892303 ~ 53892980 (-)
G1306232 LOC106576137 other downstream 465941 53054849 ~ 53062280 (-)
LOC110490288 LOC106609184 other downstream 718608 52630838 ~ 52809711 (-)
G1304988 NA other downstream 1538048 51989711 ~ 51990173 (-)
G1304896 LOC107662719 other downstream 1605693 51921495 ~ 51922528 (-)
LOC110490744 LOC106576129 other downstream 1734867 51785488 ~ 51793354 (-)
G1307309 NA other upstream 351079 53899310 ~ 53922128 (-)
G1307473 NA other upstream 601813 54150044 ~ 54150540 (-)
G1307901 NA other upstream 1218741 54766972 ~ 54768422 (-)
LOC110490337 LOC106609287 other upstream 1600544 55148760 ~ 55155353 (-)

Expression


Co-expression Network