Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938924 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 54095971 ~ 54096529 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: importin-8-like isoform X5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005036317.1 | False | 447 | mRNA | 0.46 | 2 | 54095977 | 54096529 |
| TU1490951 | True | 286 | lncRNA | 0.45 | 3 | 54095971 | 54096529 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490321 | LOC106576165 | coding | upstream | 6045 | 54081785 ~ 54089932 (+) |
| LOC110490320 | LOC106576164 | coding | upstream | 20586 | 54066924 ~ 54075391 (+) |
| LOC110490319 | LOC106576161 | coding | upstream | 29712 | 53988931 ~ 54066265 (+) |
| LOC110490318 | LOC106576161 | coding | upstream | 114488 | 53940165 ~ 53981489 (+) |
| ttll12 | ttll12 | coding | upstream | 136731 | 53909648 ~ 53959246 (+) |
| LOC110490322 | LOC106576166 | coding | downstream | 7853 | 54104382 ~ 54117420 (+) |
| LOC110490323 | LOC106576167 | coding | downstream | 49009 | 54145538 ~ 54256366 (+) |
| LOC110490324 | LOC106576203 | coding | downstream | 159975 | 54256504 ~ 54263798 (+) |
| LOC110490325 | LOC106576169 | coding | downstream | 170801 | 54267330 ~ 54281787 (+) |
| LOC110490330 | LOC106576173 | coding | downstream | 287106 | 54383635 ~ 54399850 (+) |
| G1306844 | NA | non-coding | upstream | 18116 | 54075517 ~ 54077861 (+) |
| G1306852 | NA | non-coding | upstream | 164997 | 53929805 ~ 53930980 (+) |
| LOC110490313 | LOC106576157 | non-coding | upstream | 236426 | 53828138 ~ 53859559 (+) |
| G1306755 | NA | non-coding | upstream | 385688 | 53675309 ~ 53710289 (+) |
| G1306920 | NA | non-coding | downstream | 57097 | 54153626 ~ 54153855 (+) |
| G1306927 | NA | non-coding | downstream | 90270 | 54186799 ~ 54187064 (+) |
| G1306951 | NA | non-coding | downstream | 169710 | 54266239 ~ 54266464 (+) |
| G1306957 | NA | non-coding | downstream | 193407 | 54289936 ~ 54290184 (+) |
| G1306959 | NA | non-coding | downstream | 195327 | 54291856 ~ 54292177 (+) |
| LOC110490314 | LOC106576157 | other | upstream | 205586 | 53875911 ~ 53890829 (+) |
| G1306708 | NA | other | upstream | 512625 | 53580541 ~ 53583352 (+) |
| sox5 | LOC106576150 | other | upstream | 720565 | 53352462 ~ 53471763 (+) |
| G1305302 | NA | other | upstream | 1582927 | 52512629 ~ 52513050 (+) |
| G1304886 | NA | other | upstream | 2180967 | 51914597 ~ 51915010 (+) |
| LOC110490339 | LOC106576184 | other | downstream | 1061477 | 55157706 ~ 55170847 (+) |
| G1308238 | NA | other | downstream | 1166429 | 55262958 ~ 55278451 (+) |
| G1308299 | LOC106576208 | other | downstream | 1251507 | 55348036 ~ 55349205 (+) |
| LOC110490357 | LOC106609270 | other | downstream | 1473489 | 55569924 ~ 55583925 (+) |
| G1309147 | NA | other | downstream | 1919919 | 56016448 ~ 56016948 (+) |
