LOC110490350 (LOC106576192)


Basic Information

Item Value
gene id LOC110490350
gene name LOC106576192
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 55384455 ~ 55394138 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036944681.1
TTGTTTCCTGCTCGGACAGTTTAAATAAAAGAACTGGGACACAACCGGGTAGATTAATGCACCCGCACAGGCTGAACGATATTAGAATAGAACACAGCAGCTCTTAACGACTGCTTAGCTCGCCAATATATTCTGTTTCAGACTACTTGTCTGGTAGAGAAAAcgacagctgattcaaatcattTGGAATTgtattctactgtttttatttgatcTGTGCTGGGCTGAAAGCGCGTAACGGTGGTATTTTGGGGGGACTGATATTAGTGGAAAACCTAGGTTTCtttcttattttatttcactACCCTCAAGGAATGCTTACTCAGAACAGGATACAAAAGATCTGGATTCCTTCAAAGGATGACAAACCGGCAGTCCCCCGGCGATtgaCAGGGGTCCCCCATCTGGCCAACCCCCCCACAGTGATTGTGATGGTGGGTCTGCCAGCCAGGGGGAAGACCTATATGTCCAGGAAACTCACCCGATACCTCAATTGGATCGGCATGCCCACCAAAGTCTTCAACGTGGGAGAGTATCGCAGAGAAGCAGTCAAGAACTACAGCTCGTATGACTTCTTCAAGGCTGACAACGAGAGTGCcgtgaagatcagacaACAATGTGCCTTAGCAGCTCTGATGGACGTTAAGTCTTACCTGACAGAGGAGGGAGGCCAGGTTGCAGTCTTCGATGCCACCAACACCACTCGTGAGAGACGAGACATGATCCTGGACTTCGGCAGTGAGAACGGCTTCAAGATCTTCTTCATCGAGTCGGTGTGTGATGATCCCAGCGTCATCGCCACAAATATCACGGAAGTGAAGGTGTCCTGCCCAGACTACCAGGACTGCAACAAGACAGACGCCATGGAGGACTTCCATAAGAGGATAGAGTGTTACAGGGTTCACTACGAACCCCTGGACCCAGACCAGTACGACAGGAGCCTGTCCTTCATCAAAGTGATAGATGTAGGCAGAAGGTTCCTGGTGAACCGGATCCAGGACCACGTCCAGAGTAAGATCGTCTACTACCTGATGAACATCCACGTCCAGCCCAGAGTCATCTACCTGTGTCGCCATGGAGAGAGCATGCACAACCTGCAGGGACGCCTGGGGGGAGACTCAGGGCTGTCGCCAAGGGGGAGAAAGTTTTCTGGGGCGTTGTCGATGTTTGTTAACGAGCAGAACTTGACGGATCTGAAGGTGTGGACCAATCAGATGTGTTGCAGCATCCAGACTGCTGAGAGCCTGGGAGTGCCCTACGAACAGTGGAAGGCCCTCAACGAGATAGACgctGGGGTGTGTGAGGAGATGACGTACAATGAGGTGAAGGAGAAGTACCCTGAGGAGTTTGCTCTGAGAGACCAGGACAAGTATTACTACCGCTACCCCACAGGAGAGtcctaTCAGGACCTGGTCCAGCGGGTGGAACCAGTGATCATGGAGCTGGAGAGACAGGAGAACGTTCTGGTTATCTGTCACCAGGCTGTGATGCGCTGTCTCCTGGCTTACTTCCTGGATAAGAGTGCAGAAGAGATGCCCTACCTGAAGTGTCCCCTTCACACGGTGCTGAAGCTCACCCCCATTGCCTATGGCTGCAAGGTAGAGTCCATCTCGCTCAACGTGGAAGCGGTgaacacccacagagagagaccagaggagatgAAGAAGTATCCTGGGACTCTGATCAGGAGGAACAGTGTGACCCCCCTGACCAGCCCCGAGCCCAACATCAAGAAACCTCGCATCGACGGCCTGGACGAACCCCTCGAGGAGCTGCCCCCCTCGCCCATGTCCCTCTGTACTCCTTCCCACCTCACCTTGGCCGGACAgAACATGAAGAGAAAGTCCAACAATCGCCATGAGATCCTGCAGCTCTGCTAATGAGATCGCACCGCCTCGTCACCTGATCCATGACCCCAGGAAGTGATGCCGGCAAAGAAGATTCAACAATGTCACCAAAATGGATATTGTTGTGtttccccccccccatcttcctcTTTCTGGAGATCAAAGGGCACTACTGTTCTCTTTTCTCACGCAGACGTGTTAGTGAGTGTCTGGTCTGTGTGTTATCTGCCAGTGCTTGTAGTTCAAACACTTTTCCTCTGGGAAAGAGATAGTGAGAACACTGTACATTAGAGGTCTTCTCGGGTCCACCCAAACCCAAAATACCTGAGACTCGAGCAGGCCCGGGTCCAAAATTCTAAGTTTTCCATCGGGTATGGGCCGGGTCCTGTTTGATTGTAATCGGGTCTTAGGTCTATGTAACTACAGCTGATAGACCCGAGTGGACCCGAATGGACCCGGCCATGAGCCTATAGCATATTTatttaccagtaaaacataatgtaTGCTACTGTACAATATGTTCAGTGAATGTCTTGAGGAACACTGACTCACCTAAGCTGTGGTTGGTTCTCACAAGGTTTGTATAGAAGATAGGGACAAACTAGCATGAATCAAccactctgttttctcctctggttTCTCCTCAGTGAATCTGTAGTGACAGCTCACCCTGGAATTATGGTTTAATTAGGGTAATAGCTCTGATTCTAAGGAGCTATTATATCTGGTTTGAGTGACTACTTGGCAGTCGGCAAGGCATCCTTCAGAGAGCTGGAATCAGGCCAAATATTTAAGTCTCCCTTTCTTGACACCCTCCTGAGATCTGAGTGATGAATGGTTATATCACTCTTTTAAAAACAGTTGGAAACGTTTAGTTTACGACGGAAACATTTTCCTATAGGGATGCCTCTGAAATAATGATTCTCCAAATTGTGTTAATGACTCTGACTTGTTGACATTGAGCACTTATTCACTTTTTTGTTATGATTTAAGATTTGAGTATCATACTGTTACTTAAAGGATGTTAAATTGAATGACCGGTGTACTCGTGTGCTATGAAATGAATGATCATTTTGCACAGCAAAGTTGACATCCCTGTTGAgttgtgtgtatgactgtgtccATAGACACAATtgtctctttctgtgtttctctccGAAAGGAGATTCGGACCTAGAGTGCCTAGTGTTTGTCCTGCAAGCCCAATGCGGCTTCTGCACCCATATAGCTGGCCATAGAAATTCAGACATATGGTACCTTCAGAGTACATGCAGTGTAACGTGATTCACTTTTATTTGTAAGACAGCTGTTAACATGTGTGAGCACTTATATCTTTGTTATGAAAATGCGTTCTGTAAATAGACATGTAAATATATCAGACTTGAAGGAACGCTCAGTGTTTTGGAATGTTCAAGTCTAGAATTGAGTGGGAAGGTATTTTGTAGATGCTCGTTTGTACTGCTCACTGTTTTGAAGGATTAATAGTTCATTGTAAGGAGTGTACTGTTCTGCCTCACAAAGGTAAAACACAGTAACCACGCCAACAATGAAACTTGAGAAAAATgactttaaagttttttttttgctAGCCAGCCAAATATGTTCTGCATATCATATTGGCAGTACTACTTTTGTTCATTTGTTTGCTTCTGATACTTGAATTTTAGTTTTTTTGTAAGACATTTTTTCTCAAGCTATTTATTTCTATGTAGATTTAGATAATGGTTTGGAGCGGATGGCACCTGAGTACTGTGTATGACTTGTGTATGACAAGCAAAGCGTCTGAGAGGACAACATGTGTATATTCTGCATTTGCTGGGCCAATAAATCTCTGGGAAAACAAGCCA

Function

NR:

description
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3-like isoform X1

GO: NA

KEGG:

id description
K01103 PFKFB3; 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036944681.1 True 3694 mRNA 0.46 12 55384455 55394138

Neighbor

gene id symbol gene type direction distance location
LOC110511067 rbm17 coding upstream 1759 55376420 ~ 55382696 (+)
LOC118938815 NA coding upstream 28447 55352754 ~ 55356008 (+)
LOC110490345 nudt5 coding upstream 37599 55342804 ~ 55346856 (+)
LOC110490343 LOC106576187 coding upstream 123756 55251777 ~ 55260699 (+)
LOC110490342 NA coding upstream 140623 55239996 ~ 55243832 (+)
LOC110490357 LOC106609270 coding downstream 175786 55569924 ~ 55583925 (+)
LOC110490758 LOC106576198 coding downstream 210879 55605017 ~ 55617741 (+)
LOC110490356 LOC106576202 coding downstream 229531 55623669 ~ 55629283 (+)
gata3 LOC106576211 coding downstream 335596 55729734 ~ 55747813 (+)
LOC110490359 LOC106576215 coding downstream 905168 56299306 ~ 56546327 (+)
G1308316 NA non-coding upstream 8460 55375776 ~ 55375995 (+)
G1308313 LOC106576191 non-coding upstream 10615 55373084 ~ 55373840 (+)
G1308308 NA non-coding upstream 15165 55368987 ~ 55369290 (+)
G1308306 NA non-coding upstream 19982 55363569 ~ 55364473 (+)
G1308305 NA non-coding upstream 22307 55361768 ~ 55362148 (+)
G1308343 NA non-coding downstream 40593 55434731 ~ 55437606 (+)
G1308344 NA non-coding downstream 42057 55436195 ~ 55437102 (+)
G1308362 NA non-coding downstream 64256 55458394 ~ 55458950 (+)
G1308361 NA non-coding downstream 66537 55460675 ~ 55461371 (+)
G1308359 LOC106576194 non-coding downstream 67795 55461933 ~ 55462194 (+)
G1308299 LOC106576208 other upstream 35250 55348036 ~ 55349205 (+)
G1308238 NA other upstream 118179 55262958 ~ 55278451 (+)
LOC110490339 LOC106576184 other upstream 217292 55157706 ~ 55170847 (+)
LOC110490314 LOC106576157 other upstream 1494064 53875911 ~ 53890829 (+)
G1306708 NA other upstream 1801103 53580541 ~ 53583352 (+)
G1309147 NA other downstream 622310 56016448 ~ 56016948 (+)
G1309163 LOC100136012 other downstream 642764 56036902 ~ 56037403 (+)
G1309787 NA other downstream 1518193 56912331 ~ 56914223 (+)
G1310321 gdib other downstream 1645661 57039799 ~ 57050944 (+)

Expression


Co-expression Network