LOC110490369 (LOC106576218)


Basic Information

Item Value
gene id LOC110490369
gene name LOC106576218
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 56654750 ~ 56658049 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021563719.2
CGCTATACACCAATGGAATGTAGGTTTTCAACCTGTGATCCAAATGTTGAAGCAAGGACAGTCGAAACATGACTCGAAATTTGTTTTACCGAGCTGCTAATATTGTCCAACTCAGTAGGTTTACACTTCTAGCTGGGTCAAGGTTACTTTGCACGCAAACTCAAGCAGAGCCACCGACTGTCAGACAGCAAAACAATGGAATAAGGAGAATAATCCTGAACAACCCCAAGAAGAGGAATGCCCTGTCTCTGTCCATGCTGGAATCACTGAGAAGCAACATCCTGGCTGACATCGACAGCGACAACCTCAGAGTCATCGTCATATCAGCTAAGGGACCAGTGTTCTCCTCTGGGCATGACCTGAAGGAGCTGACGTCAGCACAGGGCAGAGATTACCACACCAAGGTGTTTCAGGCCTGCTCAGAGGTTATGACCCTGATACAAGACATTCCCGTGCCTGTGATTGCCATGGTGAATGGGGTTGCCACAGCAGCAGGATGCCAGCTTGTTGCCAGTTGTGACATTGCCGTGGTGACGGAGAAGTCCACCTTCGCCACGCCAGGGGTCAACGTGGGTCTGTTCTGCTCAACACCAGCCGTGGCAATAGGAAGAGCTGTCCCCAAGAAgGTCGCCATGGAGATGCTGTTCACAGGAAGCCCGATCTCGGCACAGGATGCTTTGAGGCACGGGCTGGTCAGTAAGGTGGTTCCTGAGGAGCGTCTAGAGGAGGAGACGTTAGCCATCGCACGGCGGGTCTGTCAGGCCAGCCGGCCCGTTGTAGCCCTTGGCAAGGCCACCTtccacagACAGATGGCCCAGGGGCGGGATGCGGCCTATGCTACAGCCTCTCGTGTCATGGTGGATAACCTGGCTCTCAGAGACGGACAGGAGGGGATACGGGCCTTCATAGAGAAACGGAAGCCTGTGTGGACAAACAAAGCAGAGAAGGCCAATGACGAGTAATGTCTGCTGGGCTGGCCTACCATGGCCTGTGAGGGGTGCACGGGCTGGTGAGGGATGCTCGGCctgctcgaaccagggaccctctgcacacatcaacaactgacaccctcaaagcatcgttacctatcgctccacaaaagccacaactacttcaaggtctcagagcgagtgacgtcatcGATttaaacactattagcgcgcaccccactaacatgctagccatttcacaccagttACATCAGCAGCCTCTGGAATGGAGAGGGAGCCTGTGGATGGTTGAGGTGTTAAACTCAACCTGAACCCATCACAGAACACATGCTCGAGGAGGACATTTAGATATGAAATCCCTGTTGATTATTGTAGTGATCATCTGATGAAGGGATACTGCAGGGCTGTCTTCATATATCCCCTTTGGAGGGGATGAGGTGAAGGGTCTTGGAAAGTTAGATACTTGAGATACACCCATGGTCAAGGGACTTACACAGTACATAGATTGGGCACTTCTTGTGAGACAGAATGTAAATGTTTAAAGCAGCCATCTGCAGTTGAGACCATTAAAAAGCGGTCACTccgccactgttttggtaaaaagctgatggATGgaactggagaaatgtaaccactctaaaattcatagacagagctatggatgcaaggactgaccgtcCATGAGATACAAAtgtgttttgaggctatacattgCTTACGAAGGTGTAAAACAGGCTTATATTTGTGTTTCTGATAGGATACGACAAtaaaactaagctcatgaggaatGGAGTAGGTTTTATTCTTCAGTTCTGTATCCAATTTTCAAAGAAAATAGATTAAAAGGGAAACGAGTAGCTCTCGTCGTTGATAAACTATATATTGATAAccagttgttcagagacacaaagactACTCCATGGCTATTTTAAAAATGACAAAGTTCTCATCGATGAGGAAAATAATGAAACATAATTCTAGCCCGGTTATGGGTTGTAACaacacaataaataaaataaagcttTTGTATATATCTTCACATATAACTAATTGGAACACACAAGCACTAATTCAACATGGTGAAGATAAAAACTATGTAAACAGAAGGCCcagtatgtgtggatggtgtggtgtgtgtttattttttattttatttgttatgcTTGGGAAAGTTGAGTGAtgaaatggttgcatatcccagaACCAATGTATTGCTGTGAGCCGGGGTATGAGAGGGCTTTTAATGTTGTTCAGATGATGGATATACTTTTAGAATGAATTATACGTCttgtttatttattgtcctatcatggtggaacagttttaaaataaattatacacttgatttatttattgtcctatcatggggaactacatttttaaaataaatgatatctaattatt
>XM_021563721.2
TAGAAGGCGCTATACACCAATGGAATGTAGGTTTTCAACCTGTGATCCAAATGTTGAAGCAAGGACAGTCGAAACATGACTCGAAATTTGTTTTACCGAGCTGCTAATATTGTCCAACTCAGTAGGTTTACACTTCTAGCTGGGTCAAGGTTACTTTGCACGCAAACTCAAGCAGAGCCACCGACTGTCAGACAGCAAAACAATGGAATAAGGAGAATAATCCTGAACAACCCCAAGAAGAGGAATGCCCTGTCTCTGTCCATGCTGGAATCACTGAGAAGCAACATCCTGGCTGACATCGACAGCGACAACCTCAGAGTCATCGTCATATCAGCTAAGGGACCAGTGTTCTCCTCTGGGCATGACCTGAAGGAGCTGACGTCAGCACAGGGCAGAGATTACCACACCAAGGTGTTTCAGGCCTGCTCAGAGGTTATGACCCTGATACAAGACATTCCCGTGCCTGTGATTGCCATGGTGAATGGGGTTGCCACAGCAGCAGGATGCCAGCTTGTTGCCAGTTGTGACATTGCCGTGGTGACGGAGAAGTCCACCTTCGCCACGCCAGGGGTCAACGTGGGTCTGTTCTGCTCAACACCAGCCGTGGCAATAGGAAGAGCTGTCCCCAAGAAgGTCGCCATGGAGATGCTGTTCACAGGAAGCCCGATCTCGGCACAGGATGCTTTGAGGCACGGGCTGGTCAGTAAGGTGGTTCCTGAGGAGCGTCTAGAGGAGGAGACGTTAGCCATCGCACGGCGGGTCTGTCAGGCCAGCCGGCCCGTTGTAGCCCTTGGCAAGGCCACCTtccacagATGGCCCAGGGGCGGGATGCGGCCTATGCTACAGCCTCTCGTGTCATGGTGGATAACCTGGCTCTCAGAGACGGACAGGAGGGGATACGGGCCTTCATAGAGAAACGGAAGCCTGTGTGGACAAACAAAGCAGAGAAGGCCAATGACGAGTAATGTCTGCTGGGCTGGCCTACCATGGCCTGTGAGGGGTGCACGGGCTGGTGAGGGATGCTCGGCctgctcgaaccagggaccctctgcacacatcaacaactgacaccctcaaagcatcgttacctatcgctccacaaaagccacaactacttcaaggtctcagagcgagtgacgtcatcGATttaaacactattagcgcgcaccccactaacatgctagccatttcacaccagttACATCAGCAGCCTCTGGAATGGAGAGGGAGCCTGTGGATGGTTGAGGTGTTAAACTCAACCTGAACCCATCACAGAACACATGCTCGAGGAGGACATTTAGATATGAAATCCCTGTTGATTATTGTAGTGATCATCTGATGAAGGGATACTGCAGGGCTGTCTTCATATATCCCCTTTGGAGGGGATGAGGTGAAGGGTCTTGGAAAGTTAGATACTTGAGATACACCCATGGTCAAGGGACTTACACAGTACATAGATTGGGCACTTCTTGTGAGACAGAATGTAAATGTTTAAAGCAGCCATCTGCAGTTGAGACCATTAAAAAGCGGTCACTccgccactgttttggtaaaaagctgatggATGgaactggagaaatgtaaccactctaaaattcatagacagagctatggatgcaaggactgaccgtcCATGAGATACAAAtgtgttttgaggctatacattgCTTACGAAGGTGTAAAACAGGCTTATATTTGTGTTTCTGATAGGATACGACAAtaaaactaagctcatgaggaatGGAGTAGGTTTTATTCTTCAGTTCTGTATCCAATTTTCAAAGAAAATAGATTAAAAGGGAAACGAGTAGCTCTCGTCGTTGATAAACTATATATTGATAAccagttgttcagagacacaaagactACTCCATGGCTATTTTAAAAATGACAAAGTTCTCATCGATGAGGAAAATAATGAAACATAATTCTAGCCCGGTTATGGGTTGTAACaacacaataaataaaataaagcttTTGTATATATCTTCACATATAACTAATTGGAACACACAAGCACTAATTCAACATGGTGAAGATAAAAACTATGTAAACAGAAGGCCcagtatgtgtggatggtgtggtgtgtgtttattttttattttatttgttatgcTTGGGAAAGTTGAGTGAtgaaatggttgcatatcccagaACCAATGTATTGCTGTGAGCCGGGGTATGAGAGGGCTTTTAATGTTGTTCAGATGATGGATATACTTTTAGAATGAATTATACGTCttgtttatttattgtcctatcatggtggaacagttttaaaataaattatacacttgatttatttattgtcctatcatggggaactacatttttaaaataaatgatatctaattatt

Function

NR:

description
enoyl-CoA hydratase domain-containing protein 3, mitochondrial-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021563719.2 False 2354 mRNA 0.45 6 56654750 56658042
XM_021563721.2 True 2357 mRNA 0.45 6 56654750 56658049

Neighbor

gene id symbol gene type direction distance location
LOC110490355 LOC106576199 coding downstream 1031101 55617681 ~ 55623649 (-)
LOC110490354 LOC106576197 coding downstream 1050281 55584646 ~ 55604469 (-)
LOC110490351 LOC106576194 coding downstream 1088640 55460350 ~ 55566110 (-)
LOC110490757 LOC106576193 coding downstream 1215797 55417169 ~ 55438953 (-)
LOC110490348 LOC100136332 coding downstream 1280646 55355672 ~ 55374104 (-)
LOC110490368 LOC106576221 coding upstream 53018 56711067 ~ 56776535 (-)
LOC110490364 LOC106576219 coding upstream 68262 56726311 ~ 56730594 (-)
LOC110490367 LOC106609343 coding upstream 74257 56732306 ~ 56734711 (-)
LOC118938817 NA coding upstream 121607 56779656 ~ 56782516 (-)
LOC110490365 LOC106576224 coding upstream 137301 56795350 ~ 56802777 (-)
G1310054 NA non-coding downstream 25815 56620934 ~ 56628935 (-)
G1310046 NA non-coding downstream 55299 56597418 ~ 56599451 (-)
G1310024 NA non-coding downstream 89368 56565100 ~ 56565382 (-)
G1310020 NA non-coding downstream 94843 56559693 ~ 56559907 (-)
G1310012 NA non-coding downstream 106267 56548275 ~ 56548483 (-)
G1310105 NA non-coding upstream 46649 56704698 ~ 56704911 (-)
G1310108 NA non-coding upstream 48735 56706784 ~ 56708077 (-)
G1310167 NA non-coding upstream 147970 56806019 ~ 56806694 (-)
G1310169 NA non-coding upstream 168424 56826473 ~ 56832210 (-)
G1310239 NA non-coding upstream 274147 56932196 ~ 56932643 (-)
G1309187 NA other downstream 599686 56054491 ~ 56055064 (-)
G1308906 NA other downstream 906997 55746285 ~ 55747753 (-)
G1308831 NA other downstream 1098176 55556232 ~ 55556574 (-)
LOC110490337 LOC106609287 other downstream 1502639 55148760 ~ 55155353 (-)
G1310261 LOC106609352 other upstream 313692 56971741 ~ 56973518 (-)
LOC110490385 LOC106576235 other upstream 467765 57125783 ~ 57143499 (-)
LOC110490387 LOC106609365 other upstream 584631 57231181 ~ 57247843 (-)
G1310744 NA other upstream 720790 57295439 ~ 57441427 (-)
G1311818 NA other upstream 1490937 58148986 ~ 58149397 (-)

Expression


Co-expression Network