LOC118938817


Basic Information

Item Value
gene id LOC118938817
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 56779656 ~ 56782516 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036133.1
tgcaaatcaatcccagaacaacagcaaaggaccttgtgaagatgctggaggaaacagGAGCGTGTGGTAGGTCTCCATTTGATGGGGCCCAGTGCAGGGGAGGTGATCCAGGGCTTTGCTGTGGCTCTGAGGTGTGGTCTGATCAAACAGCAGCTGGACACCACTGTAGGACACCACTGTGGGACTCCACTCTGTTTGTGCCCAGGTGTTGACCAAACTGACAGTAACTCAGTGTGCCACTGACACCATGATGGTCAGAGGGAACTGCTGAGGTTAGCCCCCTTCTGTCAATCACTGTTGTCCAAGGCAACGGTACAGATAGCAGGGAGAAGCCAGTCAGAACATCCTCATTGTTGTGTGACGGGCAGCTATCAGCCGTCTAATGACCTCTGAGTCCGGAGCCTGATTGACAGGTGGGCGGGGACTGACACTGTTGCTGCTGGCCCTAGACACTGGGGTCACTTCCTGTTTccatgtttttttcttctcttttaaACTCTTTCTTTTGCCATATTAATGAACCAAACTTTGATATTAACCTGTGAGGGCACCTCTGACACTTTTCAACTGTGAACTCTGCAGTCCTTATGAATACTCATTAGTCTGTGACTGTACTGACAGTTTAATGGCTGCTGAGTAGCGATAAAGCCCTGATTGAGCATTTAAATACTGTAGAAACACAGTTCATGCTTTTATGCAGGGTTCTGTAGCTACGGGCTGAAGGGATTTAAGTgccataatgtaatgtaatgaacagATCGAGATTAAACTATTATCAGAATGAAGAAATATTCATTAATAAAATGCTCTTACTTTTAATTAAAGGAAGTGGTTCATATGGGATACATTAACCTAAGACTAcaatctctctgtctttttctctctctctctcactatctccatttgtcattctctctgtctcagttCTGCAGGACATAGTGACTGACTTAAACACTGTGATGAATATTCACAGGGATCATTACTAAGGTCTCTCATACTaatgggaggagagacaggggcaAAAGGCTACAACACCTAGAAAGAtatagaaccccccccctaatAAGGCTATTATCATCCATCACTTCAGACACAAATGTTACCTACAATTCAGAGT

Function

NR:

description
PREDICTED: thioredoxin reductase 1, cytoplasmic

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036133.1 True 1117 mRNA 0.44 3 56779656 56782516

Neighbor

gene id symbol gene type direction distance location
LOC110490368 LOC106576221 coding downstream 3121 56711067 ~ 56776535 (-)
LOC110490367 LOC106609343 coding downstream 44945 56732306 ~ 56734711 (-)
LOC110490364 LOC106576219 coding downstream 49062 56726311 ~ 56730594 (-)
LOC110490369 LOC106576218 coding downstream 121607 56654750 ~ 56658049 (-)
LOC110490355 LOC106576199 coding downstream 1156007 55617681 ~ 55623649 (-)
LOC110490365 LOC106576224 coding upstream 12834 56795350 ~ 56802777 (-)
LOC110490371 LOC106609349 coding upstream 49809 56832325 ~ 56875598 (-)
LOC110490376 LOC106576228 coding upstream 247628 57030144 ~ 57037055 (-)
LOC110490760 NA coding upstream 254998 57037514 ~ 57039997 (-)
LOC110490378 gdib coding upstream 257272 57039788 ~ 57050771 (-)
G1310108 NA non-coding downstream 71579 56706784 ~ 56708077 (-)
G1310105 NA non-coding downstream 74745 56704698 ~ 56704911 (-)
G1310054 NA non-coding downstream 150721 56620934 ~ 56628935 (-)
G1310046 NA non-coding downstream 180205 56597418 ~ 56599451 (-)
G1310024 NA non-coding downstream 214274 56565100 ~ 56565382 (-)
G1310167 NA non-coding upstream 23503 56806019 ~ 56806694 (-)
G1310169 NA non-coding upstream 43957 56826473 ~ 56832210 (-)
G1310239 NA non-coding upstream 149680 56932196 ~ 56932643 (-)
G1310241 NA non-coding upstream 152024 56934540 ~ 56934747 (-)
G1310242 NA non-coding upstream 154693 56937209 ~ 56937443 (-)
G1309187 NA other downstream 724592 56054491 ~ 56055064 (-)
G1308906 NA other downstream 1031903 55746285 ~ 55747753 (-)
G1308831 NA other downstream 1223082 55556232 ~ 55556574 (-)
LOC110490757 LOC106576193 other downstream 1360411 55417169 ~ 55438953 (-)
LOC110490337 LOC106609287 other downstream 1627545 55148760 ~ 55155353 (-)
G1310261 LOC106609352 other upstream 189225 56971741 ~ 56973518 (-)
LOC110490385 LOC106576235 other upstream 343298 57125783 ~ 57143499 (-)
LOC110490387 LOC106609365 other upstream 460164 57231181 ~ 57247843 (-)
G1310744 NA other upstream 596323 57295439 ~ 57441427 (-)
G1311818 NA other upstream 1366470 58148986 ~ 58149397 (-)

Expression


Co-expression Network