LOC110490376 (LOC106576228)


Basic Information

Item Value
gene id LOC110490376
gene name LOC106576228
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 57030144 ~ 57037055 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021563736.2
GTCAGTGCCGCAGCTCATGTGTTTGTTTACTTCTCGCGGGACGTAATTTACAGTTTTTCAACATAAAACGGGATTTGACCAAATGATGGAGGTTGAAACTGCCAGGCCATACTTCTTTGGAGACATAGGTGCGTATAAAAACATTTCGGCTCCTTGAAATTGTatgccagctagctagcattcaTTTGGTTACTGCATGTCATAGCTAGCAAGCATGTGTTCATGCTATAACAGCAACGTAAATCAGCTACATATGTGCCATGTTGTGTTTTAGTCCATATCGATTGTCAAGTAAAGGTTTACGATGGCAAAATGTGATGTCAACACCAGAGATGATCTAGCATGCACTCACCTAGCGCCGGCTGATTATGTAGCAATAGGTATTCTCTTGCTATTTGCTCTCTGGCTGGTGACTGTGTGGCTTGCCCCAGGCTGCTGGTCGGAGAGGACCGAGGTGCACAAAGCGGCCTCCGAGGGACATGCTGCCCAGCTGCAGCAACTCATCCAGAGCGGAGCCTCCGTCAACATAGTGGCTGTGGACTCTATCACCCCCCTCCATGAGGCATGTGAAAGGGGGCAGACCCAGTGTGTCAGGCTGCTACTGGATGCTGGAGCACAGGTGGATGCCCGTAACACGGACGGTAGCACCCCTCTGTGTGAGGCCTGCTCGGTCGGGAGCTTTGACTGTGTGCGGATGCTGCTAGAGCATGGGGCCAAGGTGAACCCCACCCTCTCTTCCCGGACCACCTCACCCCTACACGAAGCCTGCATGGGGGGTAATGCTGACGTTGTGAAGATCATGATCGCTAAAGGTGCCAGTCTGGAGGCATATGACTTGTACTATGGGACCCCACTGCATGTGGCGTGTGCCAACGACCACACGGACTGTGTCAAGGCACTACTCAACGCAGGTGCCAAAGTGAATTATGCTCGGCTGCACAAGACGGCCCTGCACCATGCTGCTAAAGTGAAGAGTGTAGACATGATCGACATGCTGGTGGAGTTTGGGGCGAACATCTACGCCAAAGACAAAAACGATAAGAAGCCCATTGACTACATCGATCCCGGTTCTCCCGCTGCACTCTGCTTAGAGTTTTATGAAAGTACTCCATTGAGTCTGCAGCAGCTGAGCAGAGTGACCCTAAGGACGATGCTGGGTATCAGAGCTCTGGAGGTCGTAGTTCAACTGGACATACCAAAGCAAATCATTAGCTTCCTCTGTTACCACTGACACCATTATCTTACTAAGGAGAAGGAAGGAAGCTCAGACATTGAAACCTTTCTATAAAACATCACAATTATCAAAATGCTACAGTCTGTACCTTAGATACCACTAGATTAGATGCATAAACATAATATGCATACAGCAAAGCACAGGTTTCCAAACAGTATTTTTAAGCAGAGCACTTTTTTCTTTGTCTTCAGAATGTGTGCCATATTAACACATTAGATACATATTTAAAGAACAGAAGCATAGGAGGTTTTAATGGGGACTTTTTGCATACAGTTTATTCTTAGAACTCCCATATCTTGTAAACCTACATGAAAGACAAATGGAGGCCCTCAGGGAaaatgagggggagaggagaaaagaaatggaggagaggaagtgatTTTGGCAGCTGATCCTGTCCACTCTGCAATACCGTCTGTGGACACTACACCAGCATTTTAGTCGCCATGACAACGCGGCAGCAACACATCCCAGATCTCCGGTACATCCTCAGGAAGGAGAAACGGTGTTGCAGCAGGAGGATGAGCGGCGTTCCCGTTGACACGCTCCAGATGTCACTGTGTATCCCAGATTCCTCCCTGACATCGGAACAGAAACCACACCTGACAACTGGATGTGTTTGAGGCGGACGTGGAATCCAGGCAACAGAGAAACACCATGGAAAACAATCCTGCTTTTACTGTTAGCTTCTCTGATCTGTTGCGTCCGCTATAGCTGAGACGGCCCAGGCCTGAATACGGTGTCTGTTTGATGAGGGTGTATGGATTCCTCGGAGTTGTCTCTCTGGTCACTGTATTGGTACTGTTATTTGACATAACCCATCTTAATAATGAGAACAGAGGAATATGTCTATTATCAACATGTCTATGTAAGGCAATGTGCATTAATCAAAAAATGTGTTTCTAAAAGATTATGACCTATTTAATCTCTCCCCACTGGCCACACTACCTCATTTCAGtgtggataattgggtaatattttgTTGAGACGTtaatgagattacaacctatattaACCCACTCAAATTAAATTCCAATAGAAAACAATgttgatttttggtttagttgtcacccaAAATGTTTATCACTGCACTTTCAACCATTTTAAAGCACAGCTAAGCTCAagtgggaatacaatgtcagttATTGATAAATCCCTGTGCTTAATCTAATAGCAGAaacaaatgacctggattgcagttgagattacattaaaagtacatgggTGCAAGGAATCAATGCCGTTTTGAGATTCTGTGCAGATTATTACAGCAGTTGTGgtgatctccacagacctgtggTCTATGCACGCTATCTTGCACATGCACCCTTTATATgattacagtaacctcaaaatgtggtcATGAATGTGTTACTCTTTTTAAGTTTGAATGTTACTTTAGTTTTTTAAGATAGTCTAAAGTtaaggctatttactgtattgcaaAGTAATATTGTGTTTTGTtgacaacacaaccaaatatcaacattttaaggagatttatcttctgcttggataggtccatctgtgccactggctcagtctggctttaattccaatatcgtctacaaattaataattgctATGTTGGATTCACGACTCCATCTAACCGAAAACAAATGTATTTTCCATatagattccacgtcacaatatgtTGACAAATTGTTGAAACAACGTTTATAGTACCAAGTACAGCGCAAGTGACAATCCTCTCAGATAATCCATCTGTTTAACCCGTTTTGGGAACGGTCAAGTTTTTGAATGCACTCGAAAAGCAAAATATGCCCTCAAAAAGCAATTTAAGTCTGTATCATCAATAAGCTCAAGCAGCTTTCTCCCCCCTCATTTAGCCTCTTCCAAATCTGTGCTGAGACGGCATGTCTGCTGGACTATTGAGTAAATGACATGTCTGTGTCAAGTGTGAAGGTTGTTAGATCATCGCTTGCGGCATTCAATTGCTTTTTACCAGGACAGGAACCTATTTGGAACTGTTTTCTGTGGATACAACGCGGCCTCGTCCATTACCGTCTTAACCGTTCAGAACACATCCAGAAATAAGCTCAGGAGCAGAAATAGCTGGAGCCCTCCCTGTTCACATGAGGGAACAAGGATAAATGCCCTCTTTAAAATAGCTTGTTAAAATAACTGACCCCGGTTCAGAAGGGATCTGCTACTGCTCAGTCTTAAAATAGGCTGACCATGTAGATGATGGTTTAAATAGCATTTTTCTCAGTCTTAACATTCAGATTGAGGAGACGAGAACAGGCATGAGAAGAATGTCCAGTTATAAAACATATTTGAACAACAAAAAAAGGTGCAATTTGGGGATTTTGGATCAGCCTTTATTAAAAGGAATGATACACCTGTTTCAAAGGCACTTTCTCTGGCTGTTCAGATAAGGCAATACCAGTCAAAGGTATCTGCACAGGGATTTCAAACATCAGGTATTTGGTGCTGTGCAGCTAACAGAAGTTATTTGATCAATCAAGCAATATAACATCAAAGTAGACTGATCTAGCATGCTGCTTGCACACTTGATACAGTATATTCATGAATCAGTATCGGGTACTAAGAATGCTACAAATACCTATTTATTATGATacatgtttgtgtaactgtttaaATCTGTCAGTCAAATACTATTGTAAATAATATGTCCTCCACAGAAATGTATGTTGCTCTGTATACTGTAAGACTGGCATTGTGTGTTAATGAACGGCATTGTTGACATGC
>XM_021563739.2
TGATGTGTCAGTGCCGCAGCTCATGTGTTTGTTTACTTCTCGCGGGACGTAATTTACAGTTTTTCAACATAAAACGGGATTTGACCAAATGATGGAGGTTGAAACTGCCAGGCCATACTTCTTTGGAGACATAGGCTGCTGGTCGGAGAGGACCGAGGTGCACAAAGCGGCCTCCGAGGGACATGCTGCCCAGCTGCAGCAACTCATCCAGAGCGGAGCCTCCGTCAACATAGTGGCTGTGGACTCTATCACCCCCCTCCATGAGGCATGTGAAAGGGGGCAGACCCAGTGTGTCAGGCTGCTACTGGATGCTGGAGCACAGGTGGATGCCCGTAACACGGACGGTAGCACCCCTCTGTGTGAGGCCTGCTCGGTCGGGAGCTTTGACTGTGTGCGGATGCTGCTAGAGCATGGGGCCAAGGTGAACCCCACCCTCTCTTCCCGGACCACCTCACCCCTACACGAAGCCTGCATGGGGGGTAATGCTGACGTTGTGAAGATCATGATCGCTAAAGGTGCCAGTCTGGAGGCATATGACTTGTACTATGGGACCCCACTGCATGTGGCGTGTGCCAACGACCACACGGACTGTGTCAAGGCACTACTCAACGCAGGTGCCAAAGTGAATTATGCTCGGCTGCACAAGACGGCCCTGCACCATGCTGCTAAAGTGAAGAGTGTAGACATGATCGACATGCTGGTGGAGTTTGGGGCGAACATCTACGCCAAAGACAAAAACGATAAGAAGCCCATTGACTACATCGATCCCGGTTCTCCCGCTGCACTCTGCTTAGAGTTTTATGAAAGTACTCCATTGAGTCTGCAGCAGCTGAGCAGAGTGACCCTAAGGACGATGCTGGGTATCAGAGCTCTGGAGGTCGTAGTTCAACTGGACATACCAAAGCAAATCATTAGCTTCCTCTGTTACCACTGACACCATTATCTTACTAAGGAGAAGGAAGGAAGCTCAGACATTGAAACCTTTCTATAAAACATCACAATTATCAAAATGCTACAGTCTGTACCTTAGATACCACTAGATTAGATGCATAAACATAATATGCATACAGCAAAGCACAGGTTTCCAAACAGTATTTTTAAGCAGAGCACTTTTTTCTTTGTCTTCAGAATGTGTGCCATATTAACACATTAGATACATATTTAAAGAACAGAAGCATAGGAGGTTTTAATGGGGACTTTTTGCATACAGTTTATTCTTAGAACTCCCATATCTTGTAAACCTACATGAAAGACAAATGGAGGCCCTCAGGGAaaatgagggggagaggagaaaagaaatggaggagaggaagtgatTTTGGCAGCTGATCCTGTCCACTCTGCAATACCGTCTGTGGACACTACACCAGCATTTTAGTCGCCATGACAACGCGGCAGCAACACATCCCAGATCTCCGGTACATCCTCAGGAAGGAGAAACGGTGTTGCAGCAGGAGGATGAGCGGCGTTCCCGTTGACACGCTCCAGATGTCACTGTGTATCCCAGATTCCTCCCTGACATCGGAACAGAAACCACACCTGACAACTGGATGTGTTTGAGGCGGACGTGGAATCCAGGCAACAGAGAAACACCATGGAAAACAATCCTGCTTTTACTGTTAGCTTCTCTGATCTGTTGCGTCCGCTATAGCTGAGACGGCCCAGGCCTGAATACGGTGTCTGTTTGATGAGGGTGTATGGATTCCTCGGAGTTGTCTCTCTGGTCACTGTATTGGTACTGTTATTTGACATAACCCATCTTAATAATGAGAACAGAGGAATATGTCTATTATCAACATGTCTATGTAAGGCAATGTGCATTAATCAAAAAATGTGTTTCTAAAAGATTATGACCTATTTAATCTCTCCCCACTGGCCACACTACCTCATTTCAGtgtggataattgggtaatattttgTTGAGACGTtaatgagattacaacctatattaACCCACTCAAATTAAATTCCAATAGAAAACAATgttgatttttggtttagttgtcacccaAAATGTTTATCACTGCACTTTCAACCATTTTAAAGCACAGCTAAGCTCAagtgggaatacaatgtcagttATTGATAAATCCCTGTGCTTAATCTAATAGCAGAaacaaatgacctggattgcagttgagattacattaaaagtacatgggTGCAAGGAATCAATGCCGTTTTGAGATTCTGTGCAGATTATTACAGCAGTTGTGgtgatctccacagacctgtggTCTATGCACGCTATCTTGCACATGCACCCTTTATATgattacagtaacctcaaaatgtggtcATGAATGTGTTACTCTTTTTAAGTTTGAATGTTACTTTAGTTTTTTAAGATAGTCTAAAGTtaaggctatttactgtattgcaaAGTAATATTGTGTTTTGTtgacaacacaaccaaatatcaacattttaaggagatttatcttctgcttggataggtccatctgtgccactggctcagtctggctttaattccaatatcgtctacaaattaataattgctATGTTGGATTCACGACTCCATCTAACCGAAAACAAATGTATTTTCCATatagattccacgtcacaatatgtTGACAAATTGTTGAAACAACGTTTATAGTACCAAGTACAGCGCAAGTGACAATCCTCTCAGATAATCCATCTGTTTAACCCGTTTTGGGAACGGTCAAGTTTTTGAATGCACTCGAAAAGCAAAATATGCCCTCAAAAAGCAATTTAAGTCTGTATCATCAATAAGCTCAAGCAGCTTTCTCCCCCCTCATTTAGCCTCTTCCAAATCTGTGCTGAGACGGCATGTCTGCTGGACTATTGAGTAAATGACATGTCTGTGTCAAGTGTGAAGGTTGTTAGATCATCGCTTGCGGCATTCAATTGCTTTTTACCAGGACAGGAACCTATTTGGAACTGTTTTCTGTGGATACAACGCGGCCTCGTCCATTACCGTCTTAACCGTTCAGAACACATCCAGAAATAAGCTCAGGAGCAGAAATAGCTGGAGCCCTCCCTGTTCACATGAGGGAACAAGGATAAATGCCCTCTTTAAAATAGCTTGTTAAAATAACTGACCCCGGTTCAGAAGGGATCTGCTACTGCTCAGTCTTAAAATAGGCTGACCATGTAGATGATGGTTTAAATAGCATTTTTCTCAGTCTTAACATTCAGATTGAGGAGACGAGAACAGGCATGAGAAGAATGTCCAGTTATAAAACATATTTGAACAACAAAAAAAGGTGCAATTTGGGGATTTTGGATCAGCCTTTATTAAAAGGAATGATACACCTGTTTCAAAGGCACTTTCTCTGGCTGTTCAGATAAGGCAATACCAGTCAAAGGTATCTGCACAGGGATTTCAAACATCAGGTATTTGGTGCTGTGCAGCTAACAGAAGTTATTTGATCAATCAAGCAATATAACATCAAAGTAGACTGATCTAGCATGCTGCTTGCACACTTGATACAGTATATTCATGAATCAGTATCGGGTACTAAGAATGCTACAAATACCTATTTATTATGATacatgtttgtgtaactgtttaaATCTGTCAGTCAAATACTATTGTAAATAATATGTCCTCCACAGAAATGTATGTTGCTCTGTATACTGTAAGACTGGCATTGTGTGTTAATGAACGGCATTGTTGACATGC

Function

NR:

description
ankyrin repeat and SOCS box protein 13-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021563736.2 False 3967 mRNA 0.43 5 57030144 57037049
XM_021563739.2 True 3670 mRNA 0.43 6 57030144 57037055

Neighbor

gene id symbol gene type direction distance location
LOC110490371 LOC106609349 coding downstream 154546 56832325 ~ 56875598 (-)
LOC110490365 LOC106576224 coding downstream 227367 56795350 ~ 56802777 (-)
LOC118938817 NA coding downstream 247628 56779656 ~ 56782516 (-)
LOC110490368 LOC106576221 coding downstream 253609 56711067 ~ 56776535 (-)
LOC110490760 NA coding upstream 459 57037514 ~ 57039997 (-)
LOC110490378 gdib coding upstream 2733 57039788 ~ 57050771 (-)
LOC110490379 ankrd16 coding upstream 15916 57052971 ~ 57058823 (-)
trnay-gua-5 NA coding upstream 19790 57056845 ~ 57056932 (-)
trnay-gua-6 NA coding upstream 20427 57057482 ~ 57057569 (-)
G1310306 NA non-coding downstream 14306 57015503 ~ 57015838 (-)
G1310289 NA non-coding downstream 32207 56996170 ~ 56997937 (-)
G1310246 NA non-coding downstream 88878 56940809 ~ 56941266 (-)
G1310245 NA non-coding downstream 89377 56940263 ~ 56940767 (-)
G1310244 NA non-coding downstream 90761 56938991 ~ 56939383 (-)
G1310620 NA non-coding upstream 26307 57063362 ~ 57065998 (-)
G1310630 NA non-coding upstream 41899 57078954 ~ 57079259 (-)
G1310631 NA non-coding upstream 42369 57079424 ~ 57079856 (-)
G1310632 NA non-coding upstream 43142 57080197 ~ 57080469 (-)
G1310634 NA non-coding upstream 45653 57082708 ~ 57083157 (-)
G1310261 LOC106609352 other downstream 56626 56971741 ~ 56973518 (-)
G1309187 NA other downstream 975080 56054491 ~ 56055064 (-)
G1308906 NA other downstream 1282391 55746285 ~ 55747753 (-)
G1308831 NA other downstream 1473570 55556232 ~ 55556574 (-)
LOC110490757 LOC106576193 other downstream 1610899 55417169 ~ 55438953 (-)
LOC110490385 LOC106576235 other upstream 88759 57125783 ~ 57143499 (-)
LOC110490387 LOC106609365 other upstream 205625 57231181 ~ 57247843 (-)
G1310744 NA other upstream 341784 57295439 ~ 57441427 (-)
G1311818 NA other upstream 1111931 58148986 ~ 58149397 (-)
G1311869 tsn9 other upstream 1343969 58381024 ~ 58386002 (-)

Expression


Co-expression Network