LOC110490760


Basic Information

Item Value
gene id LOC110490760
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 57037514 ~ 57039997 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110490760
ATGAACAGACccaagcagactgaagcagGGTTTTGGGCAGACCGAACTGCTTTTCATGAGGCAGGGCCCTTCAGGTGAAACAGCTGATTGAAGGTGGAGCATCTGTAAACATGGTGACAGTAGACAACATCACTCCTCTCCATGACGCATGCATCCAGGGACATCCAAACTTTGCCCGACTGCTACTCGATGCATGGGCTCAGGTGGACGTGAGGACCATCCATGGTAGCGCTCCTCTCTGTAACGCCTGTGCTGCGGGAAGCCTGGAGTGTGCAAAGATGCTGCTGGAACATGGAACCAAAGTCAACCCCTCCCTCACAGCACTCACTGCCTCCCCTGCTCGAGGCCTGCATAAAGGgtaatgCAGATATAGTGAGGCTAATGATAGCGCATGGAGTCTTGCTAGAGGCCTTTGACCTCCAGTTCGGTACCCCTCTACATGCTGCCTGTGCCAGGAGCATGTGGACTGTGCCAGGGTGCTGCTCAAAGCAGATGCCAAGGTGAATGCAGATAAGTTCCATGAGACGGCTCTCCACAATTCTGCCAGAGTAGAGATGGTGGACATGATTGAGTTACTGGTGGACTTTGGCGGCAACGTGTATGTCACAGACAACGACAACAAAAAGCCCATAGACTACACCAAGCCTGGCTCCCACTGAACAATGCTTACAGTATTATAAACAACTTAGCAGAGTGGCTCTGAGGACATTGCTGGGTGCCAGAGCTCTGGAGGTTGTTGCTGGGTACTAG

Function

NR:

description
ankyrin repeat and SOCS box protein 13-like

GO:

id name namespace
GO:0009987 cellular process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110490760 True 750 mRNA 0.52 6 57037514 57039997

Neighbor

gene id symbol gene type direction distance location
LOC110490376 LOC106576228 coding downstream 459 57030144 ~ 57037055 (-)
LOC110490371 LOC106609349 coding downstream 161916 56832325 ~ 56875598 (-)
LOC110490365 LOC106576224 coding downstream 234737 56795350 ~ 56802777 (-)
LOC118938817 NA coding downstream 254998 56779656 ~ 56782516 (-)
LOC110490367 LOC106609343 coding downstream 302803 56732306 ~ 56734711 (-)
LOC110490379 ankrd16 coding upstream 12974 57052971 ~ 57058823 (-)
trnay-gua-5 NA coding upstream 16848 57056845 ~ 57056932 (-)
trnay-gua-6 NA coding upstream 17485 57057482 ~ 57057569 (-)
trnay-gua-7 NA coding upstream 18137 57058134 ~ 57058221 (-)
LOC110490380 NA coding upstream 26746 57066743 ~ 57068082 (-)
G1310306 NA non-coding downstream 21676 57015503 ~ 57015838 (-)
G1310289 NA non-coding downstream 39577 56996170 ~ 56997937 (-)
G1310246 NA non-coding downstream 96248 56940809 ~ 56941266 (-)
G1310245 NA non-coding downstream 96747 56940263 ~ 56940767 (-)
G1310244 NA non-coding downstream 98131 56938991 ~ 56939383 (-)
G1310620 NA non-coding upstream 23365 57063362 ~ 57065998 (-)
G1310630 NA non-coding upstream 38957 57078954 ~ 57079259 (-)
G1310631 NA non-coding upstream 39427 57079424 ~ 57079856 (-)
G1310632 NA non-coding upstream 40200 57080197 ~ 57080469 (-)
G1310634 NA non-coding upstream 42711 57082708 ~ 57083157 (-)
G1310261 LOC106609352 other downstream 63996 56971741 ~ 56973518 (-)
G1309187 NA other downstream 982450 56054491 ~ 56055064 (-)
G1308906 NA other downstream 1289761 55746285 ~ 55747753 (-)
G1308831 NA other downstream 1480940 55556232 ~ 55556574 (-)
LOC110490757 LOC106576193 other downstream 1618269 55417169 ~ 55438953 (-)
LOC110490385 LOC106576235 other upstream 85817 57125783 ~ 57143499 (-)
LOC110490387 LOC106609365 other upstream 202683 57231181 ~ 57247843 (-)
G1310744 NA other upstream 338842 57295439 ~ 57441427 (-)
G1311818 NA other upstream 1108989 58148986 ~ 58149397 (-)
G1311869 tsn9 other upstream 1341027 58381024 ~ 58386002 (-)

Expression


Co-expression Network