LOC110490379 (ankrd16)


Basic Information

Item Value
gene id LOC110490379
gene name ankrd16
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 57052971 ~ 57058823 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021563741.2
ATGTGTAGGTTTTTGGTTGACCAACAACTTAACCTACTTTTCACCATTTAAGGTACTTGTCACCCAAGCTTCTGATCAGAAACAGCATCAAGCTAATTTAGCAGTTTAAACGGTGTCAAATAGTTAATTTTATTACATGTATATGTTCAATGGATGCTGAGAACGCATTGAAATATTTAATCAAGCTTACGCAGAATGGCGAATTGTGCACACTTAAAAAAGAACTTGGAGGCAATATTGTTGCACATTATGTACAAAAAACATTTCGGGAAATCGGGTGATACATTGTTGCATTATGCCGCCCGTCATGGCCACTTGGACATTGTGCAATTTTTAGTAAAAGAGATTGGGATGGACATAGAGCTTTACAATACCGACTACAAAAGAGCTCTGCATGAAGCTGCATCCATGGGACAGCGGGAGTGTTTGAGCTATCTGCTCACTGAAGGAGCCAAAGTAGACTGCTTAAAAAAGGCTGATTGGACCCCTCTGATGATGGCCTGCACCCGGAGGAACCTGGGTGTGATCCAGGAACTGCTGTCCCACAAGGCCGATCCCACGCTGAAGAACAAGGACGGCTGGAACTCCTTCCACATCGCCTGCAGGGAGGGAGACCCAGCAGTcatacagcacctcctactggccAACCCAGAAGTCTGGAGTACAGAGAGCAAGACGCTGAGGACTCCTCTGCACACTGCAGCAATGCACGGCTGTGAAGAAGTGGTCAGCATCTTGGTACAGAGTTGTGGTTATGTTCCGGATGGCAGGGACAGCTGTGGGGTCACTCCCTTTATGGACGCAGTGAGGAACGGACACATATCTGTGGCCAAGCTACTGCTGGAGAAGCACCAGGCCTCTCCGACTGCAGCAGACATCCTCGGGGCCCAGCCGGTGCACCAGGTTGCAGTCACAGCCCAGGAGGAGGCGCTAGAGTTCCTAGTGAGGGACCTCGGAGTGGACGTGAACCAGACAGCCACTGACATGCAGCTCACTTCCCTGCACTACGCTGCCAAGGAGGGCCACACAGGCACAATCAAAACACTCCTCACATTAGGAGCAGATCTTCACGTCAGGGACAAAAAGGGAAGAACAGCTCTTCATATGGCGTGTATAGGGCAGCATGCAGAAGCGGTCAGGACACTCCTACAGCAGGGGCTAGTAGACGTGGTGGATGCCTCGGGCTCCACTGCTCAACAGCTTGCCAAAAAAAACGATGTGCTCAGAGTGTTTGAATGTGATTTGACATAAACTTCTGTCTGAATGGAGAATcaataaattatggacattaatGGTATTCTGGATGGCAGAATAATAACTTCATATAATTTCTTTGTGTGGATTTTGTTGATGGGGATTAaacaatacagtgccttcagaaagtattcacactattttactttttccacattttgtcgtgTTAAAACGTGGgattaatacaaataaaaaactatGGATA

Function

symbol description
ankrd16 Orthologous to human ANKRD16 (ankyrin repeat domain 16).

NR:

description
ankyrin repeat domain-containing protein 16-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021563741.2 True 1459 mRNA 0.47 8 57052971 57058823

Neighbor

gene id symbol gene type direction distance location
LOC110490378 gdib coding downstream 2200 57039788 ~ 57050771 (-)
LOC110490760 NA coding downstream 12974 57037514 ~ 57039997 (-)
LOC110490376 LOC106576228 coding downstream 15916 57030144 ~ 57037055 (-)
LOC110490371 LOC106609349 coding downstream 177373 56832325 ~ 56875598 (-)
LOC110490365 LOC106576224 coding downstream 250194 56795350 ~ 56802777 (-)
LOC110490380 NA coding upstream 7920 57066743 ~ 57068082 (-)
LOC110490383 LOC106576231 coding upstream 37342 57096165 ~ 57101944 (-)
LOC110490385 LOC106576235 coding upstream 66960 57125783 ~ 57143499 (-)
LOC110490387 LOC106609365 coding upstream 172358 57231181 ~ 57247843 (-)
LOC118936373 LOC106576240 coding upstream 211479 57270302 ~ 57285431 (-)
G1310306 NA non-coding downstream 37133 57015503 ~ 57015838 (-)
G1310289 NA non-coding downstream 55034 56996170 ~ 56997937 (-)
G1310246 NA non-coding downstream 111705 56940809 ~ 56941266 (-)
G1310245 NA non-coding downstream 112204 56940263 ~ 56940767 (-)
G1310244 NA non-coding downstream 113588 56938991 ~ 56939383 (-)
G1310620 NA non-coding upstream 4539 57063362 ~ 57065998 (-)
G1310630 NA non-coding upstream 20131 57078954 ~ 57079259 (-)
G1310631 NA non-coding upstream 20601 57079424 ~ 57079856 (-)
G1310632 NA non-coding upstream 21374 57080197 ~ 57080469 (-)
G1310634 NA non-coding upstream 23885 57082708 ~ 57083157 (-)
G1310261 LOC106609352 other downstream 79453 56971741 ~ 56973518 (-)
G1309187 NA other downstream 997907 56054491 ~ 56055064 (-)
G1308906 NA other downstream 1305218 55746285 ~ 55747753 (-)
G1308831 NA other downstream 1496397 55556232 ~ 55556574 (-)
LOC110490757 LOC106576193 other downstream 1633726 55417169 ~ 55438953 (-)
G1310744 NA other upstream 320016 57295439 ~ 57441427 (-)
G1311818 NA other upstream 1090163 58148986 ~ 58149397 (-)
G1311869 tsn9 other upstream 1322201 58381024 ~ 58386002 (-)

Expression


Co-expression Network