LOC110490380


Basic Information

Item Value
gene id LOC110490380
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 57066743 ~ 57068082 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036944737.1
GGGCACCACCATCACTTTGGTGATGAAGGAGGAGGCAACAGACTACTTGGAGCTGGAGACCATCAAGAACCTTGTGAGGAAATACTCCCAGTTCATCAACTTCCCCATCTACGTATGGAGTAGCAAGACTGAGACTGTAGAGGAGCCTATTGATGAGGATGAGACAGAAGCAGATAAGGATGAAGACCACGATGAGgttgaggtggaggaagaggacaaACTAAAGAAGACAGTGTGGGAGTGGGAGCTGATGAATGACATCAAGCCCATCTGGCAGAGGCCTGccaaggaggtggaggaggatgatgagTACAAGACCTTCTCCAGGGACACAGACAAGCCCATCTCCCACTTACAGCAGAGGGGGAGGTCACCTTCAAGTCCATCCTCTTTGTGCCTGCCGCAGCTCCCCGGGGACTCTTCGAGTACGGTTCTAAGAAGAACGACTTAATTAAGGTGCCACAGCAATGATTAGGTTAC

Function

NR:

description
endoplasmin-like isoform X1

GO:

id name namespace
GO:0006950 response to stress biological_process
GO:0006457 protein folding biological_process
GO:0035889 otolith tethering biological_process
GO:0005524 ATP binding molecular_function
GO:0051082 unfolded protein binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036944737.1 True 480 mRNA 0.51 4 57066743 57068082

Neighbor

gene id symbol gene type direction distance location
LOC110490379 ankrd16 coding downstream 7920 57052971 ~ 57058823 (-)
trnay-gua-7 NA coding downstream 8522 57058134 ~ 57058221 (-)
trnay-gua-6 NA coding downstream 9174 57057482 ~ 57057569 (-)
trnay-gua-5 NA coding downstream 9811 57056845 ~ 57056932 (-)
LOC110490378 gdib coding downstream 15972 57039788 ~ 57050771 (-)
LOC110490383 LOC106576231 coding upstream 28083 57096165 ~ 57101944 (-)
LOC110490385 LOC106576235 coding upstream 57701 57125783 ~ 57143499 (-)
LOC110490387 LOC106609365 coding upstream 163099 57231181 ~ 57247843 (-)
LOC118936373 LOC106576240 coding upstream 202220 57270302 ~ 57285431 (-)
slc26a4 LOC106576239 coding upstream 225059 57293141 ~ 57307151 (-)
G1310620 NA non-coding downstream 745 57063362 ~ 57065998 (-)
G1310306 NA non-coding downstream 50905 57015503 ~ 57015838 (-)
G1310289 NA non-coding downstream 68806 56996170 ~ 56997937 (-)
G1310246 NA non-coding downstream 125477 56940809 ~ 56941266 (-)
G1310245 NA non-coding downstream 125976 56940263 ~ 56940767 (-)
G1310630 NA non-coding upstream 10872 57078954 ~ 57079259 (-)
G1310631 NA non-coding upstream 11342 57079424 ~ 57079856 (-)
G1310632 NA non-coding upstream 12115 57080197 ~ 57080469 (-)
G1310634 NA non-coding upstream 14626 57082708 ~ 57083157 (-)
G1310644 NA non-coding upstream 42099 57110181 ~ 57110387 (-)
G1310261 LOC106609352 other downstream 93225 56971741 ~ 56973518 (-)
G1309187 NA other downstream 1011679 56054491 ~ 56055064 (-)
G1308906 NA other downstream 1318990 55746285 ~ 55747753 (-)
G1308831 NA other downstream 1510169 55556232 ~ 55556574 (-)
LOC110490757 LOC106576193 other downstream 1647498 55417169 ~ 55438953 (-)
G1310744 NA other upstream 310757 57295439 ~ 57441427 (-)
G1311818 NA other upstream 1080904 58148986 ~ 58149397 (-)
G1311869 tsn9 other upstream 1312942 58381024 ~ 58386002 (-)

Expression


Co-expression Network