Item | Value |
---|---|
gene id | LOC100136741 |
gene name | LOC100136741 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048579.1 |
NCBI id | CM023233.2 |
chromosome length | 81569517 |
location | 58102240 ~ 58136639 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
TC1-like transposase |
id | name | namespace |
---|---|---|
GO:0043066 | negative regulation of apoptotic process | biological_process |
GO:0090201 | negative regulation of release of cytochrome c from mitochondria | biological_process |
GO:0005615 | extracellular space | cellular_component |
GO:0005179 | hormone activity | molecular_function |
GO:0008083 | growth factor activity | molecular_function |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021562190.2 | False | 4211 | mRNA | 0.42 | 5 | 58114128 | 58136637 |
NM_001124696.1 | False | 855 | mRNA | 0.51 | 4 | 58114190 | 58133379 |
TU1495855 | False | 2234 | lncRNA | 0.39 | 2 | 58102240 | 58136639 |
TU1495856 | True | 8387 | TUCP | 0.43 | 4 | 58114150 | 58136639 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110490421 | LOC106576274 | coding | upstream | 11897 | 58096785 ~ 58102231 (+) |
LOC100135998 | LOC100135998 | coding | upstream | 47686 | 58063226 ~ 58066442 (+) |
LOC110490419 | LOC106576273 | coding | upstream | 78429 | 58017476 ~ 58035699 (+) |
LOC110490765 | mybpc1 | coding | upstream | 97104 | 57979914 ~ 58017024 (+) |
LOC110490417 | spic | coding | upstream | 142512 | 57969231 ~ 57971616 (+) |
pmch | LOC106576280 | coding | downstream | 15844 | 58152481 ~ 58154147 (+) |
LOC110490425 | nup37 | coding | downstream | 36319 | 58172956 ~ 58182616 (+) |
LOC110490429 | LOC106576282 | coding | downstream | 89244 | 58225881 ~ 58275221 (+) |
LOC110490431 | itfg2 | coding | downstream | 147550 | 58284187 ~ 58305657 (+) |
elapor2 | LOC106576290 | coding | downstream | 229315 | 58365952 ~ 58378947 (+) |
G1311156 | NA | non-coding | upstream | 157363 | 57955503 ~ 57956765 (+) |
G1311170 | NA | non-coding | upstream | 176800 | 57936903 ~ 57937328 (+) |
G1311158 | NA | non-coding | upstream | 194213 | 57914651 ~ 57919915 (+) |
G1311150 | NA | non-coding | upstream | 202614 | 57896052 ~ 57911514 (+) |
LOC110490411 | r51a1 | non-coding | upstream | 246402 | 57864481 ~ 57868699 (+) |
G1311279 | NA | non-coding | downstream | 52586 | 58189223 ~ 58192466 (+) |
G1311283 | LOC106609449 | non-coding | downstream | 67150 | 58203787 ~ 58244009 (+) |
G1311339 | NA | non-coding | downstream | 218845 | 58355482 ~ 58356090 (+) |
G1310321 | gdib | other | upstream | 1070866 | 57039799 ~ 57050944 (+) |
G1309787 | NA | other | upstream | 1199905 | 56912331 ~ 56914223 (+) |
G1309163 | LOC100136012 | other | upstream | 2076725 | 56036902 ~ 56037403 (+) |
G1309147 | NA | other | upstream | 2097180 | 56016448 ~ 56016948 (+) |
LOC110490357 | LOC106609270 | other | upstream | 2530273 | 55569924 ~ 55583925 (+) |
LOC110490438 | LOC106576294 | other | downstream | 299907 | 58435813 ~ 58455629 (+) |
LOC110490440 | LOC106576296 | other | downstream | 340600 | 58477237 ~ 58505176 (+) |
LOC110490442 | LOC106609443 | other | downstream | 392277 | 58514317 ~ 58550337 (+) |
LOC110490444 | LOC106576210 | other | downstream | 418116 | 58554753 ~ 58565413 (+) |
G1311413 | NA | other | downstream | 477325 | 58613962 ~ 58615903 (+) |