LOC110490497


Basic Information

Item Value
gene id LOC110490497
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 61068308 ~ 61071015 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110490497
GGTTCATTTAGCTGGAAAGGAAGCTTCCTCCTCCTAAGGATCAGGGGCCTTCTTGGGCTCTGTTTCATTTTGCTCAGATTACAGAGGCTGGCCCTTTGACTTCACTTGATGTCTGAAGAGATAACAGCTCCTCAGCCATGATCTCTGATGCCCCGTAAAACAAGAAAGACATCTTTGCCAAACTCACAGAAGCCGTCGCTGTTGTTTTTTGATCCACCACTTGATGACGCCAGATACCTCAACGTGCCTCAAGTGAGAGGCGTACTCAATCCCAAGTCATTTCTGGTTGAGGAGAAGCGACAGAACAGCTGCACAACCTGTAGTTCTTGGGTGAGTCCACAGTTTGATCAACTACCGCCCCCTGCACCCAGAGGAAGGCGAGGGAGGAAGAAGTGCCTCTCTGCAACAATAATTCTTGACAGGAGTTCTCAGTTATCCAGAAAAAAAGTTGTATTTGCAAGTTCCAAGCCTTATATTTTCAGAGAAGGTCAACAGTCCAATCTCTCCTTGCAAGCACATAAGGTCAGTTCTCTAAGTACAGAGTACCTAAGTAATCAAGATGAAACGTAGACACCAACACCGATAACTTCTCTCAGGAAAGGGACAGCTGAGAGGAGACGGTTGTCAGAGGTAACACTGGAAGATGCAGCATCAACCTCTAGCAGAGGTTGGGTTCTTAGAACGTCAGCTGCCAATGTTGCCAGACATTGCAAGAGCCCAGCGTCATGCTCTGCTCGGACTCCTGCCTCAGCAACACACCACACCCCTGGCACGGACAATGTCTTGCCCACCTGATGTAGAGACTCCAGAATTACACCATGATGGTAGTTCTTTCTTCGCCTCCTGTTGCCTGCGTCACAGCCGATGACCCCGCCACACACCGTGACTTCAGAGATTTTAGCAACAGACACCCCAGAGAGGGACTATGGAGTTAAGGttacatggaggaggaggaaagggctGATGAGGTTGCTGAGGGACCGAGGTTATCTTTCAAGTGCATAGGCACCGATTAGCATCTAATCAATATAACTGTAAATATTGACATTTTATCATCATGTTCTGCAATTAACACTGAATCGTAGTTAACACCACATGAATACATTAGTCCACTGATTGAAAGTGATATGTTGCAATGACTATAATATTATCGAGTCCACTCAATTGTTTTGCTGCTTGAGATAACTTGGCATGTTGTCCATGTGCAGTTGGTAGTTCAGTCCATTATGGATGCGGCTCTGTCTAGGTTCTTGTTTTCTTTGTACCCTGGGTCcacattaaatattttttttttaaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC106576420

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110490497 True 1297 mRNA 0.46 3 61068308 61071015

Neighbor

gene id symbol gene type direction distance location
LOC110490493 LOC106576421 coding downstream 3297 61024646 ~ 61065011 (-)
LOC110490490 ptn coding downstream 95236 60926634 ~ 60973072 (-)
LOC110490487 LOC106576424 coding downstream 371721 60676532 ~ 60696587 (-)
LOC110490486 LOC106576425 coding downstream 464990 60594114 ~ 60603318 (-)
LOC110490773 LOC106576426 coding downstream 501706 60521273 ~ 60566602 (-)
LOC110490496 LOC106609505 coding upstream 4760 61075775 ~ 61080604 (-)
LOC110490499 NA coding upstream 36098 61107113 ~ 61117104 (-)
LOC110490500 NA coding upstream 53650 61124665 ~ 61132530 (-)
LOC110490501 LOC106609509 coding upstream 72772 61143787 ~ 61177047 (-)
LOC110490503 LOC106609511 coding upstream 108193 61179208 ~ 61187540 (-)
G1314792 NA non-coding downstream 73988 60989032 ~ 60994320 (-)
G1314773 NA non-coding downstream 122401 60944769 ~ 60945907 (-)
G1314727 NA non-coding downstream 227700 60840341 ~ 60840608 (-)
G1314723 NA non-coding downstream 231643 60836430 ~ 60836665 (-)
G1314720 NA non-coding downstream 236426 60831666 ~ 60831882 (-)
G1314799 NA non-coding upstream 16920 61087935 ~ 61090439 (-)
LOC110490506 med21 non-coding upstream 117793 61188370 ~ 61194701 (-)
G1314876 NA non-coding upstream 155548 61226563 ~ 61290216 (-)
G1314961 NA non-coding upstream 335866 61406881 ~ 61407809 (-)
G1314967 NA non-coding upstream 350796 61421811 ~ 61422016 (-)
G1314304 NA other downstream 295820 60772145 ~ 60772488 (-)
G1312865 rps16 other downstream 1644001 59420247 ~ 59424344 (-)
G1312023 NA other downstream 2376926 58634282 ~ 58691382 (-)
LOC110490770 NA other downstream 2439478 58627298 ~ 58684968 (-)
G1311995 NA other downstream 2547729 58519957 ~ 58520579 (-)
G1315398 LOC106609523 other upstream 539405 61610420 ~ 61612116 (-)
G1315509 NA other upstream 763611 61834626 ~ 61836573 (-)
G1315519 NA other upstream 794015 61865030 ~ 61891421 (-)
G1315518 NA other upstream 821656 61874995 ~ 62006707 (-)
G1316051 LOC106609550 other upstream 971755 62042770 ~ 62056023 (-)

Expression


Co-expression Network