LOC110490500


Basic Information

Item Value
gene id LOC110490500
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 61124665 ~ 61132530 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036944887.1
AATTGAGGCTGTGTCTTACTAGCTACTACAAGAAAAAAAAGACATTTGTCATGGCTTCCTTTTTGGACGTTGCTTTGAAGGAGATGTGTGCATGGGTGTCCATTCTACTATGCCATATCAATGGGAGGTGGAGAATGGACTTGGTTGGTCATGTATCCCAGAGAATGAGGGCATTGAGAGAGACTACTGTGACCCAGCAAAGACCGAGAGCCATGGAATACCACCGGTGAATTTTATCCTCATGATCCGCGGTCACAGCAAAGTTCGGCGACTTGCTACGGTTTCCTCCCTGGACCAACCAGAAGCTGTCCTTGCTACCGAGTGGGCTTGGTACTGGGAAGAAGAGGATGAATGCTGGAACGCATTTTGGTCATCAaCTATGGAGGACCTAGAGAGGGTGTACAGTGATCCGTCTCTTGGCTCAGTGTTTGAGTTCACTACTGAACGACACACCTATGAAGTCAATTTGGAAGaCATGATCCAGAGTAACAAGAGCTCACACACCCAAAGACTGGTAAGAAGACGTCCGATCTTCAAATCTCACAGAGATGTTCAGAGAGCAATTTGCATATCTAATACCAACACGTCGATTGTGCCACCTTACTGGGACCAGTCTCGATTGCCTAGGAACGGCTTTGAGATGGTTTTGTTGCCAAGCTCAACAGCTGAACACAAAGACATTAAGGCCCATTTTGAGAAAACCGCTGTGGGGTTTCACATACTCACCATTGAGAGAGTACAAAACCTTTACCAATGGAACTTCTATGAGCTGCAAAGAGATCAGATGAAATCCTCAGGGACAAGCATCATGGAGAAACAGCTTTTCCATGGAACTGTCTCTGAACATGTTGACAGAATTTGCAAAGACAACTTAGACTGGAGAGTGTGCAGAAACAATGACATTCCCTATGGAAAAGGAAATTACTTTGCCAGGGATGCTAGTTACTATACCAGCCAGTCCGGAGTGAGGTCCATGTTTGTTTGTCGTGTGCTGGTTGGAGACTACACTGTGGGAAACTCCAGCTGTCTGACACCACCTCTTAAAGAAACAGGAGGATCCATCGCCTATGACAGCTGTGTGGACAACATCCAAGAGCCGCATGTGTTCGTAGTTTTTAAAAAGTCTCAGATTTACCCTGAATACCTTATAAAGTTTTAAAACCATGCTCCCAACCCAAATCCCTTGGTTTAACCAAACCCTACTGCCAAGCCAAATCCTGCTTAATTGCCAAAACTACAATGGCAGGGGGAGCACAGGCTTTATAAGGATGAGTCTTGTCCTTGAGGCAGAACCGAGCAATTtccactagatgggccagctgcaaagttaAAATTCTCTATATTataattcatgaaaacaaaaagtaGCTTTTTGGTCatattttaaggttagggttagg
>XM_036944886.1
TATGCTTTGGCTTATCATGGTCATTTACGGTAAACCCTTTGCTATTTCCTTGTACGATATAAACAACATATTCTAAGTGTCATAATCTTGGCGCACAATTGAGGCTGTGTCTTACTAGCTACTACAAGTATGGCTTTCCATATTCATATTCGTGAGGATGTGGACAAAAGAGAGATTGAGATCACTGGGAATACCAATGATGCCATGGGATATGCTGAGACTTTGCTACAGAACTACCCATTTCATAAAATCATGAAAGAAAAAAAAGACATTTGTCATGGCTTCCTTTTTGGACGTTGCTTTGAAGGAGATGTGTGCATGGGTGTCCATTCTACTATGCCATATCAATGGGAGGTGGAGAATGGACTTGGTTGGTCATGTATCCCAGAGAATGAGGGCATTGAGAGAGACTACTGTGACCCAGCAAAGACCGAGAGCCATGGAATACCACCGGTGAATTTTATCCTCATGATCCGCGGTCACAGCAAAGTTCGGCGACTTGCTACGGTTTCCTCCCTGGACCAACCAGAAGCTGTCCTTGCTACCGAGTGGGCTTGGTACTGGGAAGAAGAGGATGAATGCTGGAACGCATTTTGGTCATCAaCTATGGAGGACCTAGAGAGGGTGTACAGTGATCCGTCTCTTGGCTCAGTGTTTGAGTTCACTACTGAACGACACACCTATGAAGTCAATTTGGAAGaCATGATCCAGAGTAACAAGAGCTCACACACCCAAAGACTGGTAAGAAGACGTCCGATCTTCAAATCTCACAGAGATGTTCAGAGAGCAATTTGCATATCTAATACCAACACGTCGATTGTGCCACCTTACTGGGACCAGTCTCGATTGCCTAGGAACGGCTTTGAGATGGTTTTGTTGCCAAGCTCAACAGCTGAACACAAAGACATTAAGGCCCATTTTGAGAAAACCGCTGTGGGGTTTCACATACTCACCATTGAGAGAGTACAAAACCTTTACCAATGGAACTTCTATGAGCTGCAAAGAGATCAGATGAAATCCTCAGGGACAAGCATCATGGAGAAACAGCTTTTCCATGGAACTGTCTCTGAACATGTTGACAGAATTTGCAAAGACAACTTAGACTGGAGAGTGTGCAGAAACAATGACATTCCCTATGGAAAAGGAAATTACTTTGCCAGGGATGCTAGTTACTATACCAGCCAGTCCGGAGTGAGGTCCATGTTTGTTTGTCGTGTGCTGGTTGGAGACTACACTGTGGGAAACTCCAGCTGTCTGACACCACCTCTTAAAGAAACAGGAGGATCCATCGCCTATGACAGCTGTGTGGACAACATCCAAGAGCCGCATGTGTTCGTAGTTTTTAAAAAGTCTCAGATTTACCCTGAATACCTTATAAAGTTTTAAAACCATGCTCCCAACCCAAATCCCTTGGTTTAACCAAACCCTACTGCCAAGCCAAATCCTGCTTAATTGCCAAAACTACAATGGCAGGGGGAGCACAGGCTTTATAAGGATGAGTCTTGTCCTTGAGGCAGAACCGAGCAATTtccactagatgggccagctgcaaagttaAAATTCTCTATATTataattcatgaaaacaaaaagtaGCTTTTTGGTCatattttaaggttagggttagg

Function

NR:

description
poly [ADP-ribose] polymerase 12-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036944887.1 False 1400 mRNA 0.45 10 61124665 61132434
XM_036944886.1 True 1627 mRNA 0.44 11 61124665 61132530

Neighbor

gene id symbol gene type direction distance location
LOC110490499 NA coding downstream 7561 61107113 ~ 61117104 (-)
LOC110490496 LOC106609505 coding downstream 44061 61075775 ~ 61080604 (-)
LOC110490497 NA coding downstream 53650 61068308 ~ 61071015 (-)
LOC110490493 LOC106576421 coding downstream 59654 61024646 ~ 61065011 (-)
LOC110490490 ptn coding downstream 151593 60926634 ~ 60973072 (-)
LOC110490501 LOC106609509 coding upstream 11257 61143787 ~ 61177047 (-)
LOC110490503 LOC106609511 coding upstream 46678 61179208 ~ 61187540 (-)
LOC110490506 med21 coding upstream 55840 61188370 ~ 61194701 (-)
LOC110490502 LOC106609510 coding upstream 66655 61199185 ~ 61209954 (-)
LOC110490507 LOC106576413 coding upstream 84628 61217158 ~ 61248945 (-)
G1314798 LOC106576442 non-coding downstream 30028 61005663 ~ 61094637 (-)
G1314799 NA non-coding downstream 34226 61087935 ~ 61090439 (-)
G1314792 NA non-coding downstream 130345 60989032 ~ 60994320 (-)
G1314773 NA non-coding downstream 178758 60944769 ~ 60945907 (-)
G1314727 NA non-coding downstream 284057 60840341 ~ 60840608 (-)
G1314876 NA non-coding upstream 94033 61226563 ~ 61290216 (-)
G1314961 NA non-coding upstream 274351 61406881 ~ 61407809 (-)
G1314967 NA non-coding upstream 289281 61421811 ~ 61422016 (-)
G1314969 NA non-coding upstream 292563 61425093 ~ 61426132 (-)
G1314304 NA other downstream 352177 60772145 ~ 60772488 (-)
G1312865 rps16 other downstream 1700358 59420247 ~ 59424344 (-)
G1312023 NA other downstream 2433283 58634282 ~ 58691382 (-)
LOC110490770 NA other downstream 2495835 58627298 ~ 58684968 (-)
G1311995 NA other downstream 2604086 58519957 ~ 58520579 (-)
G1315398 LOC106609523 other upstream 477890 61610420 ~ 61612116 (-)
G1315509 NA other upstream 702096 61834626 ~ 61836573 (-)
G1315519 NA other upstream 732500 61865030 ~ 61891421 (-)
G1315518 NA other upstream 760141 61874995 ~ 62006707 (-)
G1316051 LOC106609550 other upstream 910240 62042770 ~ 62056023 (-)

Expression


Co-expression Network