LOC110490513 (LOC106576407)


Basic Information

Item Value
gene id LOC110490513
gene name LOC106576407
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 61409908 ~ 61415090 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021563936.2
GAAACAAGTCGACTAATTGGTTTAATAGCCTTAGCCTACTATCGATGTGCCATATTTATTTCGTGAGCAACCGCAAGCCCTGCTTTCATTTTGACGCTTTTGGAGTCTGTTTGGAGATGACAATACACTAGAAAGTGTATTTTATTGTATGAAGTATtggttccattttttttttataacggAATATAGCCTAGGCATCTTGTATGAGATGAAAACAGTTCCAGAGAGCGAAATACGTTCATTGGTTTTGGTCACAATACGAAGAAACGATGTCGCATTATTGTGAGGATCTTCATCGTTTGGAAATAGTGGCTCATAAGATGTTTGCAACTTCTTCACCAACAAGCTGAGACTCAGCCATCAAACAGTAGAATGTGTCCCGTTGTGCCACAACCGCTGGGTGTGTCCATTGACGGGCATTTACATGGCTTTAGGGTTACCTTGGCATTCCTCCTGTCCATGTGTCTGTCCCGTATGACGTTCACGGCCGCCTGCCCACCACCCTGCCTGTGTGCCAGCGACATCGTCTCCTGCAGTGGTCTCAATCTGTCAACCGTTCCCCCTGACCTCCCTGGCTATGTCACCCGATTGGACCTCAGTCACAATGTCCTCACTGCTCTGCTCTTGGATTGGCCAGACCGGTGTCTGGACAGGCTGACCACGCTGGTCCTCAGTCAAAACGCCATTACCCATCTGGCACCGGACACCTTCGCCCCCACCCCTCACCTTCGCCACCTGGACCTCTCGTCCAATGGGCTGTCTCGGCTCAACGCATCTGCCTTCCATGGGCTCGGGGAACTGGAAGTGCTGCTTCTGTTTGGAAACCACATCAGTCAGACCATGGCGGGTGCCTTCCAGGGTCTGAGCAGCCTGGAAAGGCTGTATCTGGGCGGGAACAGACTGACTGCCTTCCCCCTGGAGCTCTACCAGCGAGATGGGGATCTGCCATGTCTGCGTTTCCTGGATTTGTCGATGAACATGGTGAGGCAGGTGCCCGTGCAGAGCCTACTCTCTCTGGCCACCTGGCAGCAGAGTGGCATCTATTTGCAGGGGAACCCGTTGGTGTGCGACTGTGCCCTGCGAGCCATGCTGGAGTACTGGGAGAGGAGGCAGTACCGTCCCCTACTAGACTTCAGGGAGGAGTATCCATGCAGCCTGGGTCAGGAGGAGTGGCTGAATTGTTCTGCTAGCCCTCAGGGTGGGTTCCATGGAACTGTAGAAGTGTCTTACCAGGCAGAGCCTGGTGATTGGCTCATGGTGCCGTGCCCTGGCGTTTCGCTCCCCCTCCGGGAAGGGTTGATGGTGTTCTGGGTGACCCCGGGCGATGGATCCCCGGCACTGGGCGTAACAGACGGTCAGAGCAGCCGCCTCACGGTCCTCACCAACGGTACCCTGGAGATCCGAGGGGCTCTCCGTGAGGATTCAGGGACTTACTCATGCGTGGCAGTCCGCGGTCGACACCGGAGCTCCAACGAGACTTTGGAGGTCACCGTCTCCGTAGGTAACCCCAGCGGACTGGGCAAGAGCGGGGAGGAACGTAGCAGTGGCGGGGAGCATTTTAACACGGCATTTACCACGCTGGCGTCCTGTGTGGTCAGCATCGTCCTGGTGCTCCTCTACCTGTACCTCACTCCCTGCCGTTGCCATGGTGGAAAGGCCGGGGGCGTTGGTGGGTGCGGCGGGCGAGCCATGCTCCTCTGTGCAGACCCCAGAGAGGCGGAGCTCGCAGACAGAAGGGTCACCGGTGGAAAGAGGGTGGCCTTCCTCGAAACGGGGGGCGAGCACCCCCACAAATGCAGGGCCAAGCACCCAGTAATGGACGCTGCAGCCATAGAGGGCATTTTGAAGAATGGAAGCAGGGCCTTGGAGCAGGTCCTCGAAGAACACGTTGCGTAGCATTCAGGGTGTGTCCTTCAAGCCCCACCAGGCTTTCACTGGACTAGACTACACCATGCAAAATGGACTGTTTGTAACATGGTTCTCAAAATGCCAAATATTGAAACCTCGCATTGAGAATCCATACATGAAAGTAGTTTTAACACCTGTTATTTCACAACAGTGATCAGACTGCTTTTTAATGTTATACCTACTGTGTGGATAGATATGGAAACAGTAGTTGGTGTCTTTATGTCAAAGTTTTATACATATGAACTTGCAGATAAAGAAATAGTTCCAAACAAAATACATTCTGTGGAACACCTGTGTGAAATGCTTTATGTAGGCATTCATGGGTCTATAATGTtattacaggatacacatggtatacactgtccatccaaatgcttacttgcaggctcCTAGTCTGTCATAAGGTGCCATGCGCTATTATGAATGATCATAACAGGGTGAACACTGACTGTACGTGTATTCTTAATGTATTATATGCAGGTTGAATGGATGCATTCAGACAAAGATGCCAAAGTCGACCCTGATCAGTGTCTGGGGACTAGCCAGCTCTAGCCCCAAGCCTCCCATGACCTATATACTATTGTTGTTCTCGGTTATTTTTGCAGGTGTGACTGTGAATAGAGTTTTTCAAGGTAAGGAAGGGACTGATATGTTACTGCTGGTATTAATATATTGAAATAACTTGGATATTGACATTCATTTAGAAGACCTACATTTCATTGTCTTGATGTTGTATGTTAATTTAAGTATATATGCATTTCAGATGAGTAGGCTTTTTTATCCATCAATGATCTCGAAACAGTGCAAGAGACCTGCTATATCTTGCAGACACCATTTTTAGAAAGAAAACACTTAATTTTATCTTAGCGTTAGGCTGTAATGGAATAAAGCTTTAAAAAGCGTGTTCACGTCCTTTGAGGTGATGGAGTGGACAGGAATTGATTGCCGAGATCCCCCCCTCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACCCTCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCATCCTCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCTCTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACCCTCACTGACAGTTCTCTAGGGGACATATATAACTACAGTAGGTTCCCACTCCCACCCTCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACCCTCACTGACAGTTCTCTAGGGGACATATATAACTACAGTAGGTTCCCACTCCCACCCTCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACCCTCACTGACAGTTCTCTAGGGGACATATATAACTACAGTAGGTTCCCACTCCCACCCTCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACCCTCACTGACAGTTCTCTAGGGGACATATATAACTACAGTAGGTTCCCACTCCCACCCTCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCaatgacagttct
>XM_036944899.1
GAAACAAGTCGACTAATTGGTTTAATAGCCTTAGCCTACTATCGATGTGCCATATTTATTTCGTGAGCAACCGCAAGCCCTGCTTTCATTTTGACGCTTTTGGAGTCTGTTTGGAGATGACAATACACTAGAAAGTGTATTTTATTGTATGAAGTATtggttccattttttttttataacggAATATAGCCTAGGCATCTTGTATGAGATGAAAACAGTTCCAGAGAGCGAAATACGTTCATTGGTTTTGGTCACAATACGAAGAAACGATGTCGCATTATTGTGAGGATCTTCATCGTTTGGAAAtctctttttgaATGGGACGCTTAAGAGTGGCTCATAAGATGTTTGCAACTTCTTCACCAACAAGCTGAGACTCAGCCATCAAACAGTAGAATGTGTCCCGTTGTGCCACAACCGCTGGGTGTGTCCATTGACGGGCATTTACATGGCTTTAGGGTTACCTTGGCATTCCTCCTGTCCATGTGTCTGTCCCGTATGACGTTCACGGCCGCCTGCCCACCACCCTGCCTGTGTGCCAGCGACATCGTCTCCTGCAGTGGTCTCAATCTGTCAACCGTTCCCCCTGACCTCCCTGGCTATGTCACCCGATTGGACCTCAGTCACAATGTCCTCACTGCTCTGCTCTTGGATTGGCCAGACCGGTGTCTGGACAGGCTGACCACGCTGGTCCTCAGTCAAAACGCCATTACCCATCTGGCACCGGACACCTTCGCCCCCACCCCTCACCTTCGCCACCTGGACCTCTCGTCCAATGGGCTGTCTCGGCTCAACGCATCTGCCTTCCATGGGCTCGGGGAACTGGAAGTGCTGCTTCTGTTTGGAAACCACATCAGTCAGACCATGGCGGGTGCCTTCCAGGGTCTGAGCAGCCTGGAAAGGCTGTATCTGGGCGGGAACAGACTGACTGCCTTCCCCCTGGAGCTCTACCAGCGAGATGGGGATCTGCCATGTCTGCGTTTCCTGGATTTGTCGATGAACATGGTGAGGCAGGTGCCCGTGCAGAGCCTACTCTCTCTGGCCACCTGGCAGCAGAGTGGCATCTATTTGCAGGGGAACCCGTTGGTGTGCGACTGTGCCCTGCGAGCCATGCTGGAGTACTGGGAGAGGAGGCAGTACCGTCCCCTACTAGACTTCAGGGAGGAGTATCCATGCAGCCTGGGTCAGGAGGAGTGGCTGAATTGTTCTGCTAGCCCTCAGGGTGGGTTCCATGGAACTGTAGAAGTGTCTTACCAGGCAGAGCCTGGTGATTGGCTCATGGTGCCGTGCCCTGGCGTTTCGCTCCCCCTCCGGGAAGGGTTGATGGTGTTCTGGGTGACCCCGGGCGATGGATCCCCGGCACTGGGCGTAACAGACGGTCAGAGCAGCCGCCTCACGGTCCTCACCAACGGTACCCTGGAGATCCGAGGGGCTCTCCGTGAGGATTCAGGGACTTACTCATGCGTGGCAGTCCGCGGTCGACACCGGAGCTCCAACGAGACTTTGGAGGTCACCGTCTCCGTAGGTAACCCCAGCGGACTGGGCAAGAGCGGGGAGGAACGTAGCAGTGGCGGGGAGCATTTTAACACGGCATTTACCACGCTGGCGTCCTGTGTGGTCAGCATCGTCCTGGTGCTCCTCTACCTGTACCTCACTCCCTGCCGTTGCCATGGTGGAAAGGCCGGGGGCGTTGGTGGGTGCGGCGGGCGAGCCATGCTCCTCTGTGCAGACCCCAGAGAGGCGGAGCTCGCAGACAGAAGGGTCACCGGTGGAAAGAGGGTGGCCTTCCTCGAAACGGGGGGCGAGCACCCCCACAAATGCAGGGCCAAGCACCCAGTAATGGACGCTGCAGCCATAGAGGGCATTTTGAAGAATGGAAGCAGGGCCTTGGAGCAGGTCCTCGAAGAACACGTTGCGTAGCATTCAGGGTGTGTCCTTCAAGCCCCACCAGGCTTTCACTGGACTAGACTACACCATGCAAAATGGACTGTTTGTAACATGGTTCTCAAAATGCCAAATATTGAAACCTCGCATTGAGAATCCATACATGAAAGTAGTTTTAACACCTGTTATTTCACAACAGTGATCAGACTGCTTTTTAATGTTATACCTACTGTGTGGATAGATATGGAAACAGTAGTTGGTGTCTTTATGTCAAAGTTTTATACATATGAACTTGCAGATAAAGAAATAGTTCCAAACAAAATACATTCTGTGGAACACCTGTGTGAAATGCTTTATGTAGGCATTCATGGGTCTATAATGTtattacaggatacacatggtatacactgtccatccaaatgcttacttgcaggctcCTAGTCTGTCATAAGGTGCCATGCGCTATTATGAATGATCATAACAGGGTGAACACTGACTGTACGTGTATTCTTAATGTATTATATGCAGGTTGAATGGATGCATTCAGACAAAGATGCCAAAGTCGACCCTGATCAGTGTCTGGGGACTAGCCAGCTCTAGCCCCAAGCCTCCCATGACCTATATACTATTGTTGTTCTCGGTTATTTTTGCAGGTGTGACTGTGAATAGAGTTTTTCAAGGTAAGGAAGGGACTGATATGTTACTGCTGGTATTAATATATTGAAATAACTTGGATATTGACATTCATTTAGAAGACCTACATTTCATTGTCTTGATGTTGTATGTTAATTTAAGTATATATGCATTTCAGATGAGTAGGCTTTTTTATCCATCAATGATCTCGAAACAGTGCAAGAGACCTGCTATATCTTGCAGACACCATTTTTAGAAAGAAAACACTTAATTTTATCTTAGCGTTAGGCTGTAATGGAATAAAGCTTTAAAAAGCGTGTTCACGTCCTTTGAGGTGATGGAGTGGACAGGAATTGATTGCCGAGATCCCCCCCTCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACCCTCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCATCCTCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCTCTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACCCTCACTGACAGTTCTCTAGGGGACATATATAACTACAGTAGGTTCCCACTCCCACCCTCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACCCTCACTGACAGTTCTCTAGGGGACATATATAACTACAGTAGGTTCCCACTCCCACCCTCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACCCTCACTGACAGTTCTCTAGGGGACATATATAACTACAGTAGGTTCCCACTCCCACCCTCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACCCTCACTGACAGTTCTCTAGGGGACATATATAACTACAGTAGGTTCCCACTCCCACCCTCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCACCCCCACTGACAGTTCTCTAGGGGACATATTTAACTACAGTAGGTTCCCACTCCCaatgacagttct

Function

NR:

description
amphoterin-induced protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021563936.2 False 4557 mRNA 0.49 2 61409908 61415090
XM_036944899.1 True 4581 mRNA 0.49 2 61409908 61415090

Neighbor

gene id symbol gene type direction distance location
LOC110490512 LOC106609518 coding downstream 20861 61358996 ~ 61389047 (-)
LOC110490511 s38a2 coding downstream 83404 61314934 ~ 61326504 (-)
LOC110490507 LOC106576413 coding downstream 160963 61217158 ~ 61248945 (-)
LOC110490502 LOC106609510 coding downstream 199954 61199185 ~ 61209954 (-)
LOC110490506 med21 coding downstream 215492 61188370 ~ 61194701 (-)
LOC100653449 LOC106576405 coding upstream 11621 61426711 ~ 61465987 (-)
LOC110490514 LOC106576438 coding upstream 60486 61475576 ~ 61477946 (-)
LOC110490515 LOC106576438 coding upstream 68011 61483101 ~ 61485762 (-)
LOC110490517 NA coding upstream 106662 61521752 ~ 61524082 (-)
LOC110490518 NA coding upstream 124303 61539393 ~ 61557927 (-)
G1314961 NA non-coding downstream 2099 61406881 ~ 61407809 (-)
G1314876 NA non-coding downstream 119692 61226563 ~ 61290216 (-)
G1314798 LOC106576442 non-coding downstream 315271 61005663 ~ 61094637 (-)
G1314799 NA non-coding downstream 319469 61087935 ~ 61090439 (-)
G1314967 NA non-coding upstream 6721 61421811 ~ 61422016 (-)
G1314969 NA non-coding upstream 10003 61425093 ~ 61426132 (-)
G1314982 NA non-coding upstream 41815 61456905 ~ 61457119 (-)
G1314987 NA non-coding upstream 53428 61468518 ~ 61468718 (-)
G1314304 NA other downstream 637420 60772145 ~ 60772488 (-)
G1312865 rps16 other downstream 1985601 59420247 ~ 59424344 (-)
G1312023 NA other downstream 2718526 58634282 ~ 58691382 (-)
LOC110490770 NA other downstream 2781078 58627298 ~ 58684968 (-)
G1311995 NA other downstream 2889329 58519957 ~ 58520579 (-)
G1315398 LOC106609523 other upstream 195330 61610420 ~ 61612116 (-)
G1315509 NA other upstream 419536 61834626 ~ 61836573 (-)
G1315519 NA other upstream 449940 61865030 ~ 61891421 (-)
G1315518 NA other upstream 477581 61874995 ~ 62006707 (-)
G1316051 LOC106609550 other upstream 627680 62042770 ~ 62056023 (-)

Expression


Co-expression Network