LOC110490518



Basic Information


Item Value
gene id LOC110490518
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 61539393 ~ 61557927 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XR_005036156.1
gggagggaagagaggaaacaGCCCCTCTCCCGTTAAAGGATGCCAAGTCTTCAGCTGAGAGCTGTTGAGGAGCACTGATCCATCCATCCGTCCTGCTCGTCCAGATGAATCTCACCACTGCGACTCCACAGCCTCGGCACAGACTTATAGGTGGAGGAGACGAGGAGCTACTCTGTACCATGAAGACGAAGGTGAAAGTGTTCTCCTGCCCCAGGCTGAGTGGAGTGCACTGCATACAAAGAGGCTTCTGGAAACCAAACGACAGCGAAACAGTCAGATAGCATCCCACTAGTTGTGATGCTAATATTTGCTGTGACTCAAACACCAACTGTACGTGTTCAAAATGAAGGTAGACTGATGTTCATATTCTACTATGGACGGTGTGTGGTACACACTTACATCGACTGGAGCAGAACAGGCACCGAGGACCATTCAGCTCCTTGTGTGGTGTGTCAGGTGTGtcatcatgtgtgtgtgtctgtgtgcatcaaTACTGAAAGCATTAGTCTGTATTTATCCACCTACTGCATCATCTTAACTCATTTCAACTGTGAAGAaggttttttaaaaatatattttttaactaggcaagtcagttaagaacaaattaatatttttaatgaatattaggaacagtgggttaactgcctgttcaggggcagaatgacaggttTGTC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005036156.1 True 677 mRNA 0.45 4 61539393 61557927

Neighbor


gene id symbol gene type direction distance location
LOC110490517 NA coding downstream 15311 61521752 ~ 61524082 (-)
LOC110490515 LOC106576438 coding downstream 53631 61483101 ~ 61485762 (-)
LOC110490514 LOC106576438 coding downstream 61447 61475576 ~ 61477946 (-)
LOC100653449 LOC106576405 coding downstream 73406 61426711 ~ 61465987 (-)
LOC110490513 LOC106576407 coding downstream 124303 61409908 ~ 61415090 (-)
LOC110490529 LOC106576403 coding upstream 56010 61613937 ~ 61646356 (-)
LOC110490528 LOC106576401 coding upstream 113716 61671643 ~ 61676140 (-)
LOC110490526 pkp2 coding upstream 119624 61677551 ~ 61685779 (-)
LOC110490535 LOC106609526 coding upstream 134734 61692661 ~ 61704751 (-)
LOC110490533 LOC106609528 coding upstream 157615 61715542 ~ 61719175 (-)
G1315049 NA non-coding downstream 2432 61536725 ~ 61536961 (-)
G1315048 NA non-coding downstream 2890 61536294 ~ 61536503 (-)
G1315045 NA non-coding downstream 3573 61535556 ~ 61535820 (-)
G1315043 NA non-coding downstream 3876 61535236 ~ 61535517 (-)
G1315036 NA non-coding downstream 8921 61529634 ~ 61530472 (-)
G1315099 NA non-coding upstream 9949 61567876 ~ 61568245 (-)
G1315122 NA non-coding upstream 25459 61583386 ~ 61583657 (-)
G1315379 NA non-coding upstream 26425 61584352 ~ 61584581 (-)
G1315380 NA non-coding upstream 26735 61584662 ~ 61600389 (-)
G1315391 NA non-coding upstream 43126 61601053 ~ 61601277 (-)
G1314304 NA other downstream 766905 60772145 ~ 60772488 (-)
G1312865 rps16 other downstream 2115086 59420247 ~ 59424344 (-)
G1312023 NA other downstream 2848011 58634282 ~ 58691382 (-)
LOC110490770 NA other downstream 2910563 58627298 ~ 58684968 (-)
G1311995 NA other downstream 3018814 58519957 ~ 58520579 (-)
G1315398 LOC106609523 other upstream 52493 61610420 ~ 61612116 (-)
G1315509 NA other upstream 276699 61834626 ~ 61836573 (-)
G1315519 NA other upstream 307103 61865030 ~ 61891421 (-)
G1315518 NA other upstream 334744 61874995 ~ 62006707 (-)
G1316051 LOC106609550 other upstream 484843 62042770 ~ 62056023 (-)

Expression



Co-expression Network