XLOC_031631 (rsrc2)


Basic Information

Item Value
gene id XLOC_031631
gene name rsrc2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 67275888 ~ 67292690 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061261
GGCAGGAGAAGCACATCCGGGTATTTTTGTTCCACCGCTAAAGAAGCGAATGATTGAAGACGCTTTACGAGTGCGACCACTAACCACAAATTTACAGctgctgttatttatttgttgacaTGGCGGCGAATGACGCCGAGTTACACGACTCTTTCTCCGGAAAATCGCAGCCAGGTGAAAATCGTAAAGCCTCCAGGAGCTCGAAGCATTGTTCACGGTCCAGATCACGCTCAACCGAGCGAAAGCGCAAGTCAGGAGACAAGAGGCACAAACGAAGCCACAGCAGAAGCAAAGAGGCACGGAAGAAGGACTCTGAGAAAGCTCTGAAATGTCAGAGCGGATCAGAGGAGCGGCTGGAGTTTTCAGACAAAGGCCGAGACCGGTTGTCTGAAGACACGGAGGAGAGACACCGGCGAAAAGACAAGAAGACCTCCAGACCGAGGAGCCATTCGAGATCACGCTCAAAAGAAAAGCGACACCATAATAGAAACTGGGACAAAAGAAGATCTCGCTCGCGATCAAGAAGTCGTGACAAGAAGAGACGGGCCAGGTCCCGGTCAAACTCCAGAAGCAAACACAGACATCGCAGCAGGAGCCGTAGCAAGAGCAGGGAAAAGAAGAAGAGGATAGAAAAATCACGGAAGAAGAGCCGCAGTCCATCAATCAGCCCAGTGACCTTCAGGGGCAGAAACACGGCTATGGATGCTCAAGAAGCATTAGCCAGGAGGTTGGAAAGAGCAAAGAAGCTTCAGGAACAGAAAGAGAAGGATATGTTGGAAAAATGGCAGCATCAAGAGAAAGCAGCAGCATCAACACCGCAGTGTGATCCAGCCGCGGCAGCACCCAGTCCTGCCCTGAACGTGGCAGCGCTGCTGGCATCCGGCACACAGGTCACGCCGCAGATTGCCATGGCCGCTCAGATGGCGGCGCTTCAGGCCAAAACGCTGGCAGAGACTGGCATCGCTGTGCCAAGCTACTACAATCCCTCAGCAGTAAACCCAATGAAGTTTGCAGAGCAGGAAAAGAAGAGGAAGATGTTGTGGCAGGGGAAGAAAGAAGGGGACAACAAGTCACAGACCGCTGAACTTTGGGAAAAGCTGAATTTTGGGAATAAAGACCAAAATGTGAAGTTCCGGAAACTTATGGGCATCAAAGGTGAAGAAGAAGCTGCTTCCTCGGCAGCGGTGAACGAGGACGGTCTGAAAACCTTGCAGCAGCAGGAGGAGATGTTTCGTAATCTGGACGTCCAGTATGAGATGGCCCGctcacagacgcacacacagaggGGAATGGGCCTTGGCTTCTCCTCCTCGTTTTCTTCAAGGGGCATGGATGCCGTCTGAccggtgtgtgtttgtgcttctcGTTTCTGTAAAACTGGTGTGTTTACGTGCTTGTAGAGAATGCTGGTGCATTAGCTTGCATGTATAATTCATCAGTTCTGtcgttttattcatttttgaacaTTCACGTGTAAATACAGTTTATTGCTCAAACACGTTGTCGCTTGATCTCTGAATATATTGTGTTTAGTAATGTACAACGTTGGTTTAGGTGATTGGGGTGTGGAATTTGTATATAAACATGTCAATTCCTGATATTTCAACGAAAGCTTTTGGGTATTCTGAGAGATGCTATTTTGCTTTTAAGAAAATTGTTACTAAGTAAATATATTAAGGGCACAGATAACCATAAACGATATAATTTATCATACGAAATGCATACCATCATGTTTTATTACATGTTACTTtagttgtaaatatatttttgtatccATTCTGATGAAATGAGGAATGCAGTGTGTTTTTCAGCTCGTCAACTATGCAGAAAGTTGGATTGTTATACACTGGTAGAATTAAACACTCAAAGATTTAAAAAA
>TCONS_00061262
AAAGAAGCGAATGATTGAAGACGCTTTACGAGTGCGACCACTAACCACAAATTTACAGctgctgttatttatttgttgacaTGGCGGCGAATGACGCCGAGTTACACGACTCTTTCTCCGGAAAATCGCAGCCAGGTGAAAATCGTAAAGCCTCCAGGAGCTCGAAGCATTGTTCACGGTCCAGATCACGCTCAACCGAGCGAAAGCGCAAGTCAGGAGACAAGAGGCACAAACGAAGCCACAGCAGAAGCAAAGAGAGACCAATTCTTCTTAAAACAGGCACGGAAGAAGGACTCTGAGAAAGCTCTGAAATGTCAGAGCGGATCAGAGGAGCGGCTGGAGTTTTCAGACAAAGGCCGAGACCGGTTGTCTGAAGACACGGAGGAGAGACACCGGCGAAAAGACAAGAAGACCTCCAGACCGAGGAGCCATTCGAGATCACGCTCAAAAGAAAAGCGACACCATAATAGAAACTGGGACAAAAGAAGATCTCGCTCGCGATCAAGAAGTCGTGACAAGAAGAGACGGGCCAGGTCCCGGTCAAACTCCAGAAGCAAACACAGACATCGCAGCAGGAGCCGTAGCAAGAGCAGGGAAAAGAAGAAGAGGATAGAAAAATCACGGAAGAAGAGCCGCAGTCCATCAATCAGCCCAGTGACCTTCAGGGGCAGAAACACGGCTATGGATGCTCAAGAAGCATTAGCCAGGAGGTTGGAAAGAGCAAAGAAGCTTCAGGAACAGAAAGAGAAGGATATGTTGGAAAAATGGCAGCATCAAGAGAAAGCAGCAGCATCAACACCGCAGTGTGATCCAGCCGCGGCAGCACCCAGTCCTGCCCTGAACGTGGCAGCGCTGCTGGCATCCGGCACACAGGTCACGCCGCAGATTGCCATGGCCGCTCAGATGGCGGCGCTTCAGGCCAAAACGCTG
>TCONS_00061263
AGCGAATGATTGAAGACGCTTTACGAGTGCGACCACTAACCACAAATTTACAGctgctgttatttatttgttgacaTGGCGGCGAATGACGCCGAGTTACACGACTCTTTCTCCGGAAAATCGCAGCCAGGTGAAAATCGTAAAGCCTCCAGGAGCTCGAAGCATTGTTCACGGTCCAGATCACGCTCAACCGAGCGAAAGCGCAAGTCAGGAGACAAGAGGCACAAACGAAGCCACAGCAGAAGCAAAGAGCGTGCTAATGCACGAAGAGACACTCTGAACAGAAGACGCTGCTGACAGATAGCAAAATTATATGCCTACTACCTGGACAGGCACGGAAGAAGGACTCTGAGAAAGCTCTGAAATGTCAGAGCGGATCAGAGGAGCGGCTGGAGTTTTCAGACAAAGGCCGAGACCGGTTGTCTGAAGACACGGAGGAGAGACACCGGCGAAAAGACAAGAAGACCTCCAGACCGAGGAGCCATTCGAGATCACGCTCAAAAGAAAAGCGACACCATAATAGAAACTGGGACAAAAGAAGATCTCGCTCGCGATCAAGAAGTCGTGACAAGAAGAGACGGGCCAGGTCCCGGTCAAACTCCAGAAGCAAACACAGACATCGCAGCAGGAGCCGTAGCAAGAGCAGGGAAAAGAAGAAGAGGATAGAAAAATCACGGAAGAAGAGCCGCAGTCCATCAATCAGCCCAGTGACCTTCAGGGGCAGAAACACGGCTATGGATGCTCAAGAAGCATTAGCCAGGAGGT
>TCONS_00061264
ACGCTTTACGAGTGCGACCACTAACCACAAATTTACAGctgctgttatttatttgttgacaTGGCGGCGAATGACGCCGAGTTACACGACTCTTTCTCCGGAAAATCGCAGCCAGGTGAAAATCGTAAAGCCTCCAGGAGCTCGAAGCATTGTTCACGGTCCAGATCACGCTCAACCGAGCGAAAGCGCAAGTCAGGAGACAAGAGGCACAAACGAAGCCACAGCAGAAGCAAAGAGCGTGCTAATGCACGAAGAGACACTCTGAACAGAAGACGCTGCTGACAGATAGCAAAATTATATGCCTACTACCTGGACAGAGACCAATTCTTCTTAAAACAGGCACGGAAGAAGGACTCTGAGAAAGCTCTGAAATGTCAGAGCGGATCAGAGGAGCGGCTGGAGTTTTCAGACAAAGGCCGAGACCGGTTGTCTGAAGACACGGAGGAGAGACACCGGCGAAAAGACAAGAAGACCTCCAGACCGAGGAGCCATTCGAGATCACGCTCAAAAGAAAAGCGACACCATAATAGAAACTGGGACAAAAGAAGATCTCGCTCGCGATCAAGAAGTCGTGACAAGAAGAGACGGGCCAGGTCCCGGTCAAACTCCAGAAGCAAACACAGACATCGCAGCAGGAGCCGTAGCAAGAGCAGGGAAAAGAAGAAGAGGATAGAAAAATCACGGAAGAAGAGCCGCAGTCCATCAATCAGCCCAGTGACCTTCAGGGGCAGAAACACGGCTATGGATGCTCAAGAAGCAT
>TCONS_00061265
aaaaaaaaaaaaagtgtatttcttGTCAGATTTATTTTGGCAAGTTTGTTCTTAGACCATTTTACTAACTCTCTTTGTTGCACTATTTTCCTGAAAGAGACCAATTCTTCTTAAAACAGGCACGGAAGAAGGACTCTGAGAAAGCTCTGAAATGTCAGAGCGGATCAGAGGAGCGGCTGGAGTTTTCAGACAAAGGCCGAGACCGGTTGTCTGAAGACACGGAGGAGAGACACCGGCGAAAAGACAAGAAGACCTCCAGACCGAGGAGCCATTCGAGATCACGCTCAAAAGAAAAGCGACACCATAATAGAAACTGGGACAAAAGAAGATCTCGCTCGCGATCAAGAAGTCGTGACAAGAAGAGACGGGCCAGGTCCCGGTCAAACTCCAGAAGCAAACACAGACATCGCAGCAGGAGCCGTAGCAAGAGCAGGGAAAAGAAGAAGAGGATAGAAAAATCACGGAAGAAGAGCCGCAGTCCATCAATCAGCCCAGTGACCTTCAGGGGCAGAAACACGGCTATGGATGCTCAA
>TCONS_00061267
TTTTGTTCCACCGCTAAAGAAGCGAATGATTGAAGACGCTTTACGAGTGCGACCACTAACCACAAATTTACAGctgctgttatttatttgttgacaTGGCGGCGAATGACGCCGAGTTACACGACTCTTTCTCCGGAAAATCGCAGCCAGGTGAAAATCGTAAAGCCTCCAGGAGCTCGAAGCATTGTTCACGGTCCAGATCACGCTCAACCGAGCGAAAGCGCAAGTCAGGAGACAAGAGGCACAAACGAAGCCACAGCAGAAGCAAAGAGGTAACTAATTTTAGCCCATTGATGTCATGTAGACCTAAATTAAACTGGTCACATCATCAGTAGTTTTACAGCTGGCATTTCTAGCTTTAGGCCAGGGTAAGTATGAAGTTTAGACAAAAGAACGAAATGCCAGACTGAGAAAAAGAGCACTGAGATAATCACAAGTGCATGTAATCTTacattcttttgtaaatattaattacaGATGAAGAGAAATGTCTGTTTGGGAGATTTTTGAACGTCCTGTATTTTAGATCATATGATAACATTTCTATAATAAATTATACTCAGCGTGCTAATGCACGAAGAGACACTCTGAACAGAAGACGCTGCTGACAGATAGCAAAATTATATGCCTACTACCTGGACAGGTAACTATCTgccatttaaactttttttttgcctaTAAAAGATCTCTTTTTGTCTCACAACCCCAGTTACTGCCTTTTTTTGTAGTCACAAGCTCAGAATTGCTAATGAAAAGTTGAGTGGATATTCCCCATGTGAATGCATGCAGATGTGTACGTTATTGAAATCCTTTTTAAAGCCATTAAGctgaattttatttgtttaaattggcTTAAAAGTCTTAAGGGCATTTTATGATGTACATAGCCGTGAGTTAAATTCAGATGGGAGAACAGGAGAGTAAGCAGAAGGGGATCATTCTTATGAATCATGCCACTTTATTGTGTATGAACGCAGCTGCTGTGTGTTATTGATCAATCGGAGAtttgtcattattatattattaaatatttggttGAACTTTTTGTCTTACTAAGCTTAAACATAGTAATAACGCATTTAAATATGGTGACTA
>TCONS_00061266
CGGGTATTTTTGTTCCACCGCTAAAGAAGCGAATGATTGAAGACGCTTTACGAGTGCGACCACTAACCACAAATTTACAGctgctgttatttatttgttgacaTGGCGGCGAATGACGCCGAGTTACACGACTCTTTCTCCGGAAAATCGCAGCCAGGTGAAAATCGTAAAGCCTCCAGGAGCTCGAAGCATTGTTCACGGTCCAGATCACGCTCAACCGAGCGAAAGCGCAAGTCAGGAGACAAGAGGCACAAACGAAGCCACAGCAGAAGCAAAGAGCGTGCTAATGCACGAAGAGACACTCTGAACAGAAGACGCTGCTGACAGATAGCAAAATTATATGCCTACTACCTGGACAGGTAACTATCTgccatttaaactttttttttgcctaTAAAAGATCTCTTTTTGTCTCACAACCCCAGTTACTGCCTTTTTTTGTAGTCACAAGCTCAGAATTGCTAATGAAAAGTTGAGTGGATATTCCCCATGTGAATGCATGCAGATGTGTACGTTATTGAAATCCTTTTTAAAGCCATTAAGctgaattttatttgtttaaattggcTTAAAAGTCTTAAGGGCATTTTATGATGTACATAGCCGTGAGTTAAATTCAGATGGGAGAACAGGAGAGTAAGCAGAAGGGGATCATTCTTATGAATCATGCCACTTTATTGTGTATGAACGCAGCTGCTGTGTGTTATTGATCAATCGGAGAtttgtcattattatattattaaatatttggttGAACTTTTTGTCTTACTAAGCTTAAACATAGTAATAACGCATTTAAATATGGTGACTA

Function

symbol description
rsrc2 Orthologous to human RSRC2 (arginine and serine rich coiled-coil 2).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-2457 Orthologous to human RSRC2 (arginine and serine rich coiled-coil 2).

Ensembl:

ensembl_id ENSDARG00000042534

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061261 False 1879 mRNA 0.46 10 67275888 67292690
TCONS_00061262 False 930 nonsense_mediated_decay 0.52 8 67280218 67292651
TCONS_00061263 False 765 nonsense_mediated_decay 0.51 7 67282347 67292646
TCONS_00061264 False 760 nonsense_mediated_decay 0.50 7 67282359 67292631
TCONS_00061265 False 533 lncRNA 0.47 3 67282366 67283489
TCONS_00061267 False 1095 lncRNA 0.38 3 67288411 67292666
TCONS_00061266 True 811 lncRNA 0.40 4 67288411 67292673

Neighbor

gene id symbol gene type direction distance location
XLOC_031630 zcchc8 coding downstream 8181 67250959 ~ 67267707 (-)
XLOC_031629 clip1a coding downstream 34255 67188245 ~ 67241633 (-)
XLOC_031628 cdca5 coding downstream 95088 67175283 ~ 67180800 (-)
XLOC_031627 BX897741.1 coding downstream 111469 67161442 ~ 67164419 (-)
XLOC_031626 rom1a coding downstream 130383 67126774 ~ 67145505 (-)
XLOC_031632 mlxip coding upstream 23126 67315816 ~ 67349916 (-)
XLOC_031633 unga coding upstream 58529 67351219 ~ 67365750 (-)
XLOC_031634 si:dkey-251i10.2 coding upstream 170337 67463027 ~ 67471375 (-)
XLOC_031635 UTP14C coding upstream 181429 67474119 ~ 67499279 (-)
XLOC_031636 zbtb20 coding upstream 240490 67533180 ~ 67661102 (-)
XLOC_031620 CU929288.1 non-coding downstream 738554 66537217 ~ 66537334 (-)
XLOC_031616 NA non-coding downstream 1031756 66239915 ~ 66244132 (-)
XLOC_031612 NA non-coding downstream 1250944 66022664 ~ 66024944 (-)
XLOC_031608 NA non-coding downstream 1601253 65670605 ~ 65674635 (-)
XLOC_031644 NA non-coding upstream 671817 67964507 ~ 67972342 (-)
XLOC_031650 CABZ01083943.1 non-coding upstream 913262 68205952 ~ 68214334 (-)
XLOC_031655 LO017735.1 non-coding upstream 1325268 68617958 ~ 68618089 (-)
XLOC_031656 NA non-coding upstream 1329408 68622098 ~ 68668542 (-)
XLOC_031659 NA non-coding upstream 1521233 68813923 ~ 68816110 (-)

Expression


Co-expression Network