XLOC_031632 (mlxip)


Basic Information

Item Value
gene id XLOC_031632
gene name mlxip
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 67315816 ~ 67349916 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061268
ACCTTTTATGCTTTTTTAAGctactttgaaacaataattattgtgaaaagtggtATACAATGAACTTGAATTTAACTGAATACATTTGAACCTGATAATTTGTCATGGGATATGAAAAATGTCGGGCTTGCTGCCTGAGTCTGTCACTGGAAGATGTAGTTTTGACTGACTGGCACAGTTGCAACCCAAATATATAGTGTGCTCTCCACAACAGTGGGCGTCTCCCTCGAGCCatccaatcagaatcgagtatgTCATCGCTACGCAACGCCCGTCTTGAGTTCACCAAATCCCTTGAAGTTACAAGTAGTAGTTAGCATGCAGGCTAACGTGATGGGCTTGCGGAcatttaaatagcttataaaacTAGACAAACTAACTTCGCAGGAATGGACGAAGGAATTGACGAAAAGTAAAGTAACACCCTCGGGTTTTAACTGCAATACTTATAGTAAAAGTCGAAGCGCGTATTTTTAACATGGCTACTCGACAATACCGGAGGGCCACAATGATGATCAAGCAGGAGCAGGACGACGATTCCGACGCGGAGGAGTCCACGCTTTCTTTCAAGAAACCAGACGGTCGGGAACCTCAAATCATCCACAGCGGTCATTTTATGGTGTCTTCCCCTCATACCGATCACCCCCCGAAAAAAGGTTACGACTTCGacactgtaaacaaacaaacctgCCAGACGTATCACTTCGGGAAGACTAGCACGTCGCATCTGTCTATTGATGCTTCTCTGACGAAACTCTTTGAATGTATGACGCTTGCATACAGTGGAAGGTTAGTGTCACCGAAATGGAAGAACTTCAAGGGCCTCAAGCTGCTGTGGAGAGACAAGATTCGCCTCAACAATGCCATTTGGAGAGCCTGGTATATGCAATATGTAGAAAAGAGACAGAACCCAGTTTGCCATTTTGTTACACCTTTGGATGGCAATATGGACTCAGGAGTGCATCGGCCAACAGAGGCAATAGCAACAGAAGGAAAGTACTGGAAAAGGAGAATTGAAATTGTTATCAGAGAATATCATAAATGGAGAACATATTTCAAGAAAAGATTACAGAAGCACAAGGATGAAGACCTGTCCAGCCTTCTCAAGGGTGCGGAGGAACAGTTTTCACTGTTTGGGGAAGTGTGTCCAGACACCTGCCGTGTCCTCTTCTACCAGGACGAGGACATCAGCGCTGGAGGGCGTCGCAGGTCCCGCAGGAGCCGGGATTCACCTGTCCCAATGGAGATGGACTCGCTCTTTGACATGGACGTGCTCATGTCTGAATTCTCAGACACGCTCTTCTCCACACTGGCCTCTCATCAGCCTGTAGCGTGGCCCAATCCCAGGGAGATCGCTCATGCAGGTAATGCGGATATGATCCAGCCAGGCCTCATTCCACTGCAGCCCAATCTGGACTTCATGGACACTTTTGAGCCTCTGCAAGATTTGTTTCACACCCTGCGTCCGCCAGTCTTTCCCTCCACTTCCCCCACTGCCCCATCAGTCACTCCCTTAACCAGCAGCAGCTCCCAAACACAGGCTTCCCTGCTTTCATCCCTGCCGCTCTCCACGGAGCTTCCTTCTCTGCCTCTGGACTACCGCCTCATGCCCTCTGCTCCTCTGCCTGGCCATCTCTCGGTGGCCAACCAGGACAATGGTAACTCCGTCGGTCCGTCCTACCAACAGCCCTACATGCCTCTTTTCACAGAGCAAGTGAGCTCCTCCGTCCCGTCTATCCTGCCTCCCCCAGCTCCACCTCTCCCCTCAGCCCCACAGCCTCTCAGCACAGTCACTACAGTCCCCCAGCCCAGCCAGAGCGTCCCGCCTTCATCAGTAATAACGCACACCGCCTCCTCCACAGTGACTCCCACTGACGCAGCCACTACCGTCAGCCACAGGTCCAGTTTTGAGCTGCCCCCTGCGCCATCTCCACAGCCTGTAGTCTCCAGCTCTGCCTCGCTCGGCTCACAGCCAGTCAACTTCGCCTTGCCCAAATCCATCCAGCCTCCCATCTCTAGCAAAAAGTCCAGACACTCACAGAGACCGATTGTCCCGGCGAATCCACTGCCGTCTCCTCAGCTCATACTGACAGGTCCCACCAGTGCTGTCATTGTCACTCCGTCTCCTCTCTCCACTGATGTTGTCTCCACCACCGGTATGGTCATTGCCTCCTCCGGTATTCCTTGTGGTTCTGCTGGATTTCATATTCTCCCTCAGACGCAGAAATCTCCTCAGCTCATCGTACCCAAAGAGGAAACTGCAACAACTGTGTCCAACAAGAAGACATCAGTGCAGTCAGCAAGTAAAACACGTGATGGCCGAATCTCAGGTCAAGGGTCACCACTGGGAGTAGAACAGGTGCCAAGCCCTCAGTCACCCCTCAGCACCAGTACAGGCATGAGCAAAAATGAAAACAGTCAGAGTCGCAGAGTGAACCACATATCTGCCGAGCAGAAGAGGCGATTCAACATCAACATCTGCTTCAAGACATTGTGCAGTCTTGTGCCGACTCTCAAGTCTCAATCAAATATCAGTAATGCTTCGACACTTCAGAAGACTGTTGATTACATTGGCAAACTGCAACTAGAGAGACAACAGATGCTGGAAGAGACCAAGAGACTGCGAGAGGAGATCGAGGAGCTCAACACGTCCATAAGCTTGTGTCAGGAGCAGCTTCCGGAAACAGGGGTTCCCATCACACGCCATCGCTTTGACCACATGAGGGAGAAGTTCGATGACTATGTGAAGAACCGAACTCTTCAGAACTGGAAATTCTGGATCTTTAGCGTCATCATTCAGCCTCTGTTTGAGTCCTTCAATGGGACAGTGTCTACAACCAACAACACAGAGCTGTGTGAAACCACCATGCAGTGGCTGGACCGTTACTGTTCCCTCCCAGCCCTCCGGCCCATGGTGCTCAGGACGTTACGGCAGCTCTGCACCAGCACCTCCATCCTGACCGACCCCTCACTTTTACCTGAGGAAGCCAAAAAGGCCGCTCTCAACCCCAAAAAACATTCCTCAGGGTCTTAGTTTTAACACAGTGACTTCTGAAATGTGCTTTTCAGGCATAACAGTCATGATCAGGAGCCTCCAAAACAACACCTTGCGCATGTGGATCTAAGGATCTGTGCTTTGCTGTTACTCACTGAACTCCTTCAGAGTGGTGAAAACTGCTCGATTGTGTACTTTACGCGTGTTTACAGAACAGTTTTGAGCTCtctgtgtgtgtacctgctcAAATCTCTTCTGTTTGCCTCACTTATGCACTAAGGACACTACCCACAAAGCAGTCACGTTGAATTTATCTAAATGGGCCAGTCTAGGAACAAAAGCCTTTTTTACTAGAGCTGTGTCGAGAATTTGTTTCAAGTAATTGATTCTGTATTGATTCTAAATGTATCGCTCTTCTCTCTTGAATAGATTCTGAGCATAGTTATTACAAGCTTGACTTCAATTCCCTACAAATACTAGTTTAACCTAAAATAAGTGTCATCTGCTGATTGAGACTGACCTAGAACGCAATCTGCTGATAAAAGCTAGTCCTAGAGCAacgtttgctgttaaaaactagcctaaaagcTAGCCAAGAGCATCATCTGTTGGGATGACGTTAAAAGCTAGCCTGGAGCATCAAAAGTAGTTAagagagccatctgctgttagagATATACCTAGAATGCCATTTGCTGATAAAAGCTAGTCCTAGAGCAACGtttgctgctaaaaactagcctaaaagctagcctagagcacctgttaaaaactagcctagagtgtcattGCTGGAATGACGTTAAAAGCTAGCCTGGAGCATCAAAGCTGGTTAcgagcgccatctgctgctagAGATTAACCTAGTACGCCATCTGCTGATAAAAGCTACCCCTAGAGCGACGTCTGCtcctaaaaactagcctagagtgtcatcaGCTGGAATGACGCTAAAAGCTAGCTTGGAGCATCAAAACTAGTTAAGAGCGTTAAACTAGTTAACTAGTTAAGAGTTAATCTGCTGTTATAGACTATCCTAGAATGCCATCTGCTGATGAAAGCTAGTCCTAGAGcaacgtctgctgttaaaaactagcccaaaagctagcctagagcgcctgttaaaaactagcctagcgctgtctgctgttaaaaccttGCCTAGAGCACCATATGCTGAtaagaactagcctagagtgtcctctgctgttaaaagccagcctagagcaccatatgCTGTTAAAAGCCAGCCTAGAGTGTCATATGCTGTTAATAGATAGCCTAGAGCATTGTCTGAtaattaaaaactagcttagactGCCATCTACTGTTAGGAGCCATCGTAGAGCTttgtctgctattaaaaactagcctagggcgtcatctgctattaaaatctagcctagagcatcgtctgaTGACTACAAACTAGCGTAgactgccatctgctgttagGTACTATCGTAGAGCGTTGTCTGCTATTAATATCTAGCatagagcagcatctgctgttaaaaatttgcctagagcgctgtctactttaaaaaaaaactggcctagagcatTGTCTGCTATTAGAATCTAGcgtagagcaccatctgctgttaaaaactagcccagaacATTCCCGTCTGCTTTTAAAAGCTAGctaagagcgccatctgctgtttaaaaactagcctagatcaccGCCTGctatttaaaaactagcctagaatgccatcatctgctgttaaaaactagtctagagtgtcACCTGCATTAAGAACTAGCTTAAAGAACAATGGGATGTTGAAAGCTAGCTTAAAGCGCCTTCTGCTGCTAAAAACGAAGCTGAGAATCTATTCAAGAAAGAATattgatgcattttgaaaacttCTGATTCGATGCTGAATTGAATTCTCAAACAATTTTACGCcagaactttatttattttttaaccattCAGACAtaattgatttcattttaaaatggcaaaCCAAAGGCTGCATCTCTTGTTTACGTTCATCCTCTTCTTTTGCGCTTCTTGGACTTTGTTACATTAGAGCTGTTACCTCTAGCCTTGTGGATTTTACCTCTCagggtgttttatttttcttatatttttagtGTCTTTCTTATTTCAATCTGGTTATTTAGAGCTCTTTTGGAATCTGATGCTCAGTTTATTAAAACCTGAAGCaccacttaaagggacagttcagccagaaatttatatattttttcaccatTTACTTCCTCAGTTGGTTCTAAATACTCTACAAATACCAGTTTAACCTAAAATAAAGGTTTATAGGGAGCTGCGTTTACAATAATCTTGGCATAAAAGCCAACTTGAATGACTCAGTCGAATGCACAATCGCATTGTATGGATAAATactagcctaaagtgccatctATTGTTAAAgattagcctagagcactgtctgtgttaaaaaccagcctagagcattGTATGCTGTTAAAACCTAGCCTAGAACGCCGTCTGCTGATAAAAGCTAGCCTAAAGCGCAGTTTGCTcctaaaagctagcctagagcgtcacatgctgttaaaaactagcctagagcaccgtcttcCGATTAAATCTACgccctagagtgccgtctgctgttaaaaactagcctagagcgccgtctgctgatTAAAGCTAGCCCTAGAGCACCAACTTCAgttaaaaactggcctagagcgtCGTCTGTTGATTAAAGCTAGCCCTAGAGCGCCATAttgttaaaaaaactagcctagagggtcACCTGCTGATAAAAGTTAGCCCTAGAGCGCCATCTTCAGTTAAAATCcagcctagagtgtcatctgctgaTAAAAGCTAGCCCGAAAGCGCCATTTTaagtaaaaaactagcctagagcgtcatctgctgatAAAAGCTAGCCCTAGAGCACCATtttcagttaaaaactagcctagagcgtcatctgctggtTAAAACTAGCCCTAGAGCGATgtcttctgtttaaaaaaaactagcctagagctttgTCTGCTGATAAAAGCTGGtcatagagcgccatctgatgttaaaaactaaccAAGAGCACCGTAGTTGGTTCTTGCATGGAAATCGACAGCTGTTTTTtcctccaacattcttcagaatatcttccatttgtgttcaacagatgaaagaaactcaaacaggtttggaacaactggaggatgagtaaatgatgactgaattaaagtttttgtgtgaactaaccctttaacaatTAGCTGGATCGATTGATCAAGACtgaattttgaagcatttaactGCATGAACAGAAGCTAGTTGTGTATAAAGTCTCATCTAAAATGACAAATagcataaatattaatattcatatgaGAGTGAGGTACATTTGATATGCCTTAAATTGAGTTGACATATAAAAGGGAGATCTAAGAGAATTAAACCCTGTTAAAAAAATCCAGTGGGATATCATTTTAGGGGTGGTATTTTcaactaaaattatattttaatagcaTTTGATAGCCCGATTAGTATGTATATGGGAGGACGTATTTTTGTCAGACCCTTATTTTTAGcatctacatttttttattactccTAAGTTCACCTATTCACCGTGTGCTCTGGATgctttttctttttgcagtttGTTTGTGGAAAAAAGCAGATGGATCTTTCCAACTTTTCCCCAATCCAAAAAAATAAGTGTTCAGTGTTCATTTATATGTACAAGGTGTCTGAATTGGTCATATTAGATTTGTTagtaaagtgtatgtgtgt

Function

symbol description
mlxip Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human MLXIP (MLX interacting protein).

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0005634 nucleus cellular_component
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific molecular_function
GO:0046983 protein dimerization activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060526-8 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human MLXIP (MLX interacting protein).

Ensembl:

ensembl_id ENSDARG00000059474

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061268 True 6755 mRNA 0.44 17 67315816 67349916

Neighbor

gene id symbol gene type direction distance location
XLOC_031631 rsrc2 coding downstream 23126 67275888 ~ 67292690 (-)
XLOC_031630 zcchc8 coding downstream 48109 67250959 ~ 67267707 (-)
XLOC_031629 clip1a coding downstream 74183 67188245 ~ 67241633 (-)
XLOC_031628 cdca5 coding downstream 135016 67175283 ~ 67180800 (-)
XLOC_031627 BX897741.1 coding downstream 151397 67161442 ~ 67164419 (-)
XLOC_031633 unga coding upstream 1303 67351219 ~ 67365750 (-)
XLOC_031634 si:dkey-251i10.2 coding upstream 113111 67463027 ~ 67471375 (-)
XLOC_031635 UTP14C coding upstream 124203 67474119 ~ 67499279 (-)
XLOC_031636 zbtb20 coding upstream 183264 67533180 ~ 67661102 (-)
XLOC_031637 arhgap31 coding upstream 321291 67671207 ~ 67721368 (-)
XLOC_031620 CU929288.1 non-coding downstream 778482 66537217 ~ 66537334 (-)
XLOC_031616 NA non-coding downstream 1071684 66239915 ~ 66244132 (-)
XLOC_031612 NA non-coding downstream 1290872 66022664 ~ 66024944 (-)
XLOC_031608 NA non-coding downstream 1641181 65670605 ~ 65674635 (-)
XLOC_031644 NA non-coding upstream 614591 67964507 ~ 67972342 (-)
XLOC_031650 CABZ01083943.1 non-coding upstream 856036 68205952 ~ 68214334 (-)
XLOC_031655 LO017735.1 non-coding upstream 1268042 68617958 ~ 68618089 (-)
XLOC_031656 NA non-coding upstream 1272182 68622098 ~ 68668542 (-)
XLOC_031659 NA non-coding upstream 1464007 68813923 ~ 68816110 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000059_06136533_06161227 MLXIP coding CI01000059 null 6136224 ~ 6161227 (-)