LOC118938822


Basic Information

Item Value
gene id LOC118938822
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 62556129 ~ 62557834 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036168.1
tagagttgaggatgtaagcagtgtacagaggaagaggatagttgaggatgtaagcagtgtggaagaggatagagttgaggatgtaagcagtgtggaagaggatagagttgaggatgtaagcagtgtacgGAGTAAGAGGATAGTTGAGgatgtaagcagtgtggaagaggatagagttgaggatgtaagcagtgtggaagaggatagagttgaggatgGAAGCAGTGTACGGAGTAAGAggatagttgaggatgtaagcagtgtggaagaggatagagttgaggatgtaagcagtgtggaagaggatagagttgaggatgtaagcagtgtacagaggaagaggatagttgaggatgtaagcagtgtacagaggaagaggatagagttgaggatgtaagcagtgtacgGAGTAAGAGGATAGTTGAGGTTGTAAGCAGTGTACGGAGTAAGAGGATAGTTGAGGTTGTAAGCAGTGTACGGACTAAGAggatagttgaggatgtaagcagtgtacagaggaagaggatagagttgaggatgtaagcagtgtacggaggaagaggatagttgaggatgtaagcagtgaggaagaggatagagttgaggatgtaagcagtgaggaagaggatagagttgaggtTGTAAGCAGTGTACGGAGTAAGAGGATAGTTGAGGTTGTAAGCAGTGTGGAAGAGGATAGTTGAGGTTGTAAGCAGTGtggaagaggatagagttgaggatgtaagcagtgtacggagtaagaggatagttgaggatgtaagcagtgtacagagtaagaggatagttgaggatgtaagcagtgtacgGAGTAAGAGGATAGTTGAGgatgtaagcagtgaggaagaggatagagttgaggtTGTAAGCAGTGTACAGAGTAAGAggatagttgaggatgtaagcagtgaggaagaggatagagttgaggtTGTAAGCAGTGTACAGAGTAAGAggatagttgaggatgtaagcagtgaggaagaggatagagttgaggtTGTAAGCAGTGTACAGAGTAAGAggatagttgaggatgtaagcagtgaggaagaggatagagttgaggatgtaagcagtgaggaagaggatagagttgaggatgtaagcagtgtacggagtaagaggatagttgaggatgtaagcagtgaggaagaggatagagttgaggatgtaagcagtgtacagagtaagaggatagttgaggatgtaagcagtgaggaagaggatagagttgaggatgGAAGCAGTGTACGGAGTAAGAggata
>XR_005036169.1
tagagttgaggatgtaagcagtgtacagaggaagaggatagttgaggatgtaagcagtgtggaagaggatagagttgaggatgtaagcagtgtggaagaggatagagttgaggatgtaagcagtgtacgGAGTAAGAGGATAGTTGAGgatgtaagcagtgtggaagaggatagagttgaggatgtaagcagtgtggaagaggatagagttgaggatgGAAGCAGTGTACGGAGTAAGAggatagttgaggatgtaagcagtgtggaagaggatagagttgaggatgtaagcagtgtggaagaggatagagttgaggatgtaagcagtgtacagaggaagaggatagttgaggatgtaagcagtgtacagaggaagaggatagagttgaggatgtaagcagtgtacgGAGTAAGAGGATAGTTGAGGTTGTAAGCAGTGTACGGAGTAAGAGGATAGTTGAGgatgtaagcagtgaggaagaggatagagttgaggatgtaagcagtgaggaagaggatagagttgaggtTGTAAGCAGTGTACGGAGTAAGAGGATAGTTGAGGTTGTAAGCAGTGTGGAAGAGGATAGTTGAGGTTGTAAGCAGTGtggaagaggatagagttgaggatgtaagcagtgtacggagtaagaggatagttgaggatgtaagcagtgtacagagtaagaggatagttgaggatgtaagcagtgtacgGAGTAAGAGGATAGTTGAGgatgtaagcagtgaggaagaggatagagttgaggtTGTAAGCAGTGTACAGAGTAAGAggatagttgaggatgtaagcagtgaggaagaggatagagttgaggtTGTAAGCAGTGTACAGAGTAAGAggatagttgaggatgtaagcagtgaggaagaggatagagttgaggtTGTAAGCAGTGTACAGAGTAAGAggatagttgaggatgtaagcagtgaggaagaggatagagttgaggatgtaagcagtgaggaagaggatagagttgaggatgtaagcagtgtacggagtaagaggatagttgaggatgtaagcagtgaggaagaggatagagttgaggatgtaagcagtgtacagagtaagaggatagttgaggatgtaagcagtgaggaagaggatagagttgaggatgGAAGCAGTGTACGGAGTAAGAggata
>XR_005036170.1
tagagttgaggatgtaagcagtgtacagaggaagaggatagttgaggatgtaagcagtgtggaagaggatagagttgaggatgtaagcagtgtggaagaggatagagttgaggatgtaagcagtgtacgGAGTAAGAGGATAGTTGAGgatgtaagcagtgtggaagaggatagagttgaggatgtaagcagtgtggaagaggatagagttgaggatgGAAGCAGTGTACGGAGTAAGAggatagttgaggatgtaagcagtgtggaagaggatagagttgaggatgtaagcagtgtggaagaggatagagttgaggatgtaagcagtgtacagaggaagaggatagttgaggatgtaagcagtgtacagaggaagaggatagagttgaggatgtaagcagtgtacgGAGTAAGAGGATAGTTGAGgatgtaagcagtgaggaagaggatagagttgaggatgtaagcagtgaggaagaggatagagttgaggtTGTAAGCAGTGTACGGAGTAAGAGGATAGTTGAGGTTGTAAGCAGTGTGGAAGAGGATAGTTGAGGTTGTAAGCAGTGtggaagaggatagagttgaggatgtaagcagtgtacggagtaagaggatagttgaggatgtaagcagtgtacagagtaagaggatagttgaggatgtaagcagtgtacgGAGTAAGAGGATAGTTGAGgatgtaagcagtgaggaagaggatagagttgaggtTGTAAGCAGTGTACAGAGTAAGAggatagttgaggatgtaagcagtgaggaagaggatagagttgaggtTGTAAGCAGTGTACAGAGTAAGAggatagttgaggatgtaagcagtgaggaagaggatagagttgaggtTGTAAGCAGTGTACAGAGTAAGAggatagttgaggatgtaagcagtgaggaagaggatagagttgaggatgtaagcagtgaggaagaggatagagttgaggatgtaagcagtgtacggagtaagaggatagttgaggatgtaagcagtgaggaagaggatagagttgaggatgtaagcagtgtacagagtaagaggatagttgaggatgtaagcagtgaggaagaggatagagttgaggatgGAAGCAGTGTACGGAGTAAGAggata

Function

NR:

description
Protein FAM186A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036168.1 False 1287 mRNA 0.45 3 62556129 62557834
XR_005036169.1 False 1177 mRNA 0.45 4 62556129 62557834
XR_005036170.1 True 1141 mRNA 0.45 4 62556129 62557834

Neighbor

gene id symbol gene type direction distance location
LOC110490566 LOC106609564 coding upstream 333163 62171687 ~ 62224624 (+)
LOC110490565 LOC106576370 coding upstream 391642 62158298 ~ 62164487 (+)
LOC110490562 LOC106576371 coding upstream 400704 62139914 ~ 62155425 (+)
pacsin2 LOC106576372 coding upstream 416363 62094087 ~ 62139766 (+)
ttll1 LOC106576374 coding upstream 462303 62083863 ~ 62093826 (+)
depdc4 LOC106609043 coding downstream 228793 62786627 ~ 62792739 (+)
scyl2 scyl2 coding downstream 235080 62792914 ~ 62816834 (+)
LOC110490575 LOC106609039 coding downstream 286302 62844136 ~ 62850292 (+)
impdh1b LOC106576497 coding downstream 740514 63298348 ~ 63327816 (+)
LOC110490585 LOC106609575 coding downstream 825381 63383215 ~ 63407684 (+)
G1315846 NA non-coding upstream 2418 62553376 ~ 62553711 (+)
G1315842 NA non-coding upstream 18380 62534681 ~ 62537749 (+)
G1315834 NA non-coding upstream 33197 62521961 ~ 62522932 (+)
G1315801 NA non-coding upstream 82085 62473439 ~ 62474044 (+)
G1315787 NA non-coding upstream 106224 62449438 ~ 62449905 (+)
G1315852 NA non-coding downstream 33919 62591753 ~ 62595148 (+)
G1315859 NA non-coding downstream 51305 62609139 ~ 62610152 (+)
G1315862 NA non-coding downstream 59176 62617010 ~ 62631422 (+)
G1315866 NA non-coding downstream 75677 62633511 ~ 62636972 (+)
G1315956 NA non-coding downstream 183783 62741617 ~ 62741950 (+)
LOC110490567 anks1b other upstream 80615 62231272 ~ 62589732 (+)
G1315679 NA other upstream 292113 62257134 ~ 62264016 (+)
G1315616 NA other upstream 408969 62100972 ~ 62147160 (+)
LOC110490560 LOC106609558 other upstream 475469 62077976 ~ 62080953 (+)
LOC110490554 LOC106576378 other upstream 500813 62053220 ~ 62055992 (+)
G1315860 NA other downstream 56961 62614795 ~ 62615187 (+)
G1316007 LOC100301653 other downstream 363870 62921704 ~ 62932522 (+)
LOC110490586 LOC106609575 other downstream 826574 63383366 ~ 63385748 (+)
G1317320 NA other downstream 1256006 63813840 ~ 63814369 (+)
G1317674 LOC106613263 other downstream 1831772 64389606 ~ 64390097 (+)

Expression

LOC118938822 Expression in all Baseline Samples

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LOC118938822 Expression in each Bioproject

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LOC118938822 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
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Co-expression Network