LOC110490778 (fut9)


Basic Information

Item Value
gene id LOC110490778
gene name fut9
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 62774696 ~ 62776771 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110490778
atgtCCTTCGTCAAACCCACTcactccaggtcatctGGTCAAGATATGCCCACTCCGGCTTCCTAGGGTGTTCTACGGCCTGTTCTGATGATGACATTCTTACTGCGCTTATCCTTCATGTACTACAAACGCCAGATCAAGTTCCTCTCATGCCCTATCGACCAGGCATCCCACTTGGGAAAGGCTTGTTGTCCTCCTTGCCCTCAAGTACGTAGGGCAAGGAACCAGATGGTGAACCAAACACACCATGCCCAGACAACCATTCAGGATGACTATCATTTTGATCTGGCCAATTGATCACACCTTTGACATAGACTCTTGTGCCTACTTTAACATCAAAGGCTGTCACCTAACAGTGGATAAAAACCTTTACAGCAAGGCGCACAGTGTCATATTCCACCATAGAGACATCCATGGAGACCTGAAGAACATGCCCCAAGAGCAATGTCCATGGTTCCAGAAATGGGTGTGGTGGAATGCAGAATCACCGGCTAACACAAACAGTATCCCTGGTGTTGACCGCTTGTTCAATTTGACTGCCAGTTATCGACTGGATTCTGATATCAAGGTTCCTTATGGGTCGCTTGTTGAGGTAACCAGTGAGGATAAAATCTTTGAGCTGCCCAAGAAGGACAAATTAGTCTGCTGGGTAGTGAGCAACTGGAACCCAAACTACAAGAGGGTACAGGTGTTCAACGAGCTCAGTAGGCATGTCAAAGTAGAGGCCTATGGGAGACATTTTAGTAGATACCTAGAAAAAAAAGACTACCGAAAGACACTGTCCAGCTGTATTAAAACCAACAATAGTTAA

Function

symbol description
fut9 Enables 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity. Involved in several processes, including fucosylation; positive regulation of neuron projection development; and regulation of leukocyte tethering or rolling. Located in trans-Golgi network membrane.

NR:

description
fucosyltransferase 9

GO:

id name namespace
GO:0036065 fucosylation biological_process
GO:0006486 protein glycosylation biological_process
GO:0032580 Golgi cisterna membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008417 fucosyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110490778 True 811 mRNA 0.46 2 62774696 62776771

Neighbor

gene id symbol gene type direction distance location
LOC110490571 LOC106596632 coding downstream 7896 62754956 ~ 62767499 (-)
LOC110490570 LOC106609586 coding downstream 34561 62729224 ~ 62740135 (-)
LOC110490568 LOC106609566 coding downstream 62329 62633205 ~ 62712367 (-)
LOC110490564 LOC106609562 coding downstream 605361 62165720 ~ 62169335 (-)
LOC118938820 NA coding downstream 644231 62126538 ~ 62130465 (-)
LOC118938823 NA coding upstream 43315 62820086 ~ 62821153 (-)
si:ch211-244b2.4 LOC106576452 coding upstream 44484 62821255 ~ 62841674 (-)
LOC110490574 LOC106609040 coding upstream 73369 62850140 ~ 62872750 (-)
LOC110490576 LOC106576462 coding upstream 98319 62875090 ~ 62882603 (-)
LOC110490577 lum coding upstream 109957 62886728 ~ 62890920 (-)
G1316414 NA non-coding downstream 22672 62751689 ~ 62752024 (-)
G1316409 NA non-coding downstream 28189 62745602 ~ 62746507 (-)
G1316310 NA non-coding downstream 169588 62587042 ~ 62605108 (-)
G1316332 NA non-coding downstream 211907 62557286 ~ 62562789 (-)
G1316431 NA non-coding upstream 1378 62778149 ~ 62778350 (-)
G1316434 NA non-coding upstream 4373 62781144 ~ 62781591 (-)
G1316435 NA non-coding upstream 4956 62781727 ~ 62782221 (-)
G1316436 NA non-coding upstream 5980 62782751 ~ 62783033 (-)
G1316442 NA non-coding upstream 14835 62791606 ~ 62791723 (-)
G1316323 NA other downstream 237226 62534288 ~ 62537470 (-)
G1316178 NA other downstream 510666 62257098 ~ 62264093 (-)
G1316051 LOC106609550 other downstream 718673 62042770 ~ 62056023 (-)
G1315518 NA other downstream 801001 61874995 ~ 62006707 (-)
G1316451 NA other upstream 126088 62902859 ~ 62904682 (-)
G1316904 LOC106609576 other upstream 509736 63256527 ~ 63287904 (-)
G1318092 NA other upstream 1306266 64083037 ~ 64083888 (-)
G1318164 LOC106576481 other upstream 1439733 64216504 ~ 64227675 (-)
LOC110499867 LOC106576572 other upstream 1706056 64481916 ~ 64636502 (-)

Expression


Co-expression Network