Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110490585 |
| gene name | LOC106609575 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 63383215 ~ 63407684 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110490585 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021564026.2 | False | 1385 | mRNA | 0.56 | 3 | 63383215 | 63407684 |
| XM_021564025.2 | False | 1173 | mRNA | 0.57 | 3 | 63404730 | 63407684 |
| XM_036944949.1 | True | 1508 | mRNA | 0.54 | 3 | 63404902 | 63407684 |
63,368,000
63,372,000
63,376,000
63,380,000
63,384,000
63,388,000
63,392,000
63,396,000
63,400,000
63,404,000
63,408,000
63,412,000
63,416,000
63,420,000
NC_048579.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| impdh1b | LOC106576497 | coding | upstream | 55399 | 63298348 ~ 63327816 (+) |
| LOC110490575 | LOC106609039 | coding | upstream | 532923 | 62844136 ~ 62850292 (+) |
| scyl2 | scyl2 | coding | upstream | 566381 | 62792914 ~ 62816834 (+) |
| depdc4 | LOC106609043 | coding | upstream | 590476 | 62786627 ~ 62792739 (+) |
| LOC110490567 | anks1b | coding | upstream | 793483 | 62231272 ~ 62589732 (+) |
| LOC110490817 | LOC106576481 | coding | downstream | 814400 | 64222084 ~ 64227831 (+) |
| pax4 | LOC106576509 | coding | downstream | 998382 | 64406007 ~ 64408064 (+) |
| LOC118938929 | LOC106576509 | coding | downstream | 1001229 | 64408913 ~ 64410363 (+) |
| LOC110499870 | NA | coding | downstream | 1136451 | 64544135 ~ 64552715 (+) |
| LOC110510792 | wnt5b | coding | downstream | 1295097 | 64702781 ~ 64824029 (+) |
| G1316717 | NA | non-coding | upstream | 6644 | 63376361 ~ 63376571 (+) |
| G1316709 | NA | non-coding | upstream | 18692 | 63364240 ~ 63364523 (+) |
| G1316676 | NA | non-coding | upstream | 93707 | 63289209 ~ 63289508 (+) |
| G1316667 | LOC106609576 | non-coding | upstream | 101355 | 63280874 ~ 63281860 (+) |
| G1317006 | NA | non-coding | downstream | 55976 | 63463660 ~ 63463903 (+) |
| G1317014 | NA | non-coding | downstream | 64083 | 63471767 ~ 63472105 (+) |
| G1317024 | NA | non-coding | downstream | 74104 | 63481788 ~ 63482023 (+) |
| G1317027 | NA | non-coding | downstream | 75389 | 63483073 ~ 63483354 (+) |
| G1317046 | NA | non-coding | downstream | 90477 | 63498161 ~ 63498537 (+) |
| G1316007 | LOC100301653 | other | upstream | 450693 | 62921704 ~ 62932522 (+) |
| G1315860 | NA | other | upstream | 768028 | 62614795 ~ 62615187 (+) |
| G1315679 | NA | other | upstream | 1119199 | 62257134 ~ 62264016 (+) |
| G1315616 | NA | other | upstream | 1236055 | 62100972 ~ 62147160 (+) |
| G1317320 | NA | other | downstream | 406156 | 63813840 ~ 63814369 (+) |
| G1317674 | LOC106613263 | other | downstream | 981922 | 64389606 ~ 64390097 (+) |
| G1317686 | LOC106576509 | other | downstream | 999325 | 64407009 ~ 64410034 (+) |
| G1317968 | NA | other | downstream | 1752292 | 65159976 ~ 65179127 (+) |
| LOC110518394 | LOC107732972 | other | downstream | 1884118 | 65291802 ~ 65866042 (+) |
