Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110512490 |
| gene name | LOC106592130 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 65878010 ~ 65892365 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D isoform X1 |
| id | description |
|---|---|
| K13985 | NAPEPLD; N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036944971.1 | False | 2040 | mRNA | 0.54 | 6 | 65878010 | 65891457 |
| XM_036944970.1 | True | 2113 | mRNA | 0.53 | 6 | 65878010 | 65892365 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517393 | LOC106576623 | coding | downstream | 574876 | 65268990 ~ 65303134 (-) |
| LOC110513258 | cacna2d4 | coding | downstream | 646347 | 65153383 ~ 65231663 (-) |
| LOC118938827 | LOC106576471 | coding | downstream | 819367 | 65021405 ~ 65058643 (-) |
| LOC118938826 | NA | coding | downstream | 863599 | 64995972 ~ 65014411 (-) |
| LOC110510812 | NA | coding | downstream | 877031 | 64997957 ~ 65000979 (-) |
| LOC110511373 | LOC106592131 | coding | upstream | 83 | 65892448 ~ 65898819 (-) |
| LOC110511371 | LOC106597280 | coding | upstream | 9377 | 65901742 ~ 65979435 (-) |
| LOC110499707 | LOC106609801 | coding | upstream | 89276 | 65981641 ~ 65986435 (-) |
| LOC110500955 | cpsf6 | coding | upstream | 95567 | 65987246 ~ 66009466 (-) |
| LOC110499708 | LOC106576651 | coding | upstream | 140696 | 66033061 ~ 66047899 (-) |
| G1319094 | NA | non-coding | downstream | 10275 | 65866213 ~ 65867735 (-) |
| G1319095 | LOC106576667 | non-coding | downstream | 14129 | 65860095 ~ 65863881 (-) |
| G1319108 | NA | non-coding | downstream | 27818 | 65847523 ~ 65850192 (-) |
| G1319069 | NA | non-coding | downstream | 53366 | 65786250 ~ 65824644 (-) |
| G1319084 | NA | non-coding | downstream | 61209 | 65816275 ~ 65816801 (-) |
| G1319116 | NA | non-coding | upstream | 29827 | 65922192 ~ 65924248 (-) |
| G1319119 | NA | non-coding | upstream | 38314 | 65930679 ~ 65930929 (-) |
| G1319120 | NA | non-coding | upstream | 39723 | 65932088 ~ 65932300 (-) |
| G1319126 | NA | non-coding | upstream | 60566 | 65952931 ~ 65953255 (-) |
| G1319128 | NA | non-coding | upstream | 67286 | 65959651 ~ 65960031 (-) |
| G1318935 | NA | other | downstream | 404846 | 65469967 ~ 65473164 (-) |
| G1318477 | NA | other | downstream | 726610 | 65068277 ~ 65153287 (-) |
| LOC110499867 | LOC106576572 | other | downstream | 1392692 | 64481916 ~ 64636502 (-) |
| G1318164 | LOC106576481 | other | downstream | 1650335 | 64216504 ~ 64227675 (-) |
| G1318092 | NA | other | downstream | 1794122 | 64083037 ~ 64083888 (-) |
| G1319357 | LOC106593594 | other | upstream | 386680 | 66279045 ~ 66282108 (-) |
| LOC110490781 | LOC106576552 | other | upstream | 916082 | 66808409 ~ 66920061 (-) |
| G1319781 | LOC106576551 | other | upstream | 963814 | 66856179 ~ 66862281 (-) |
| G1319847 | NA | other | upstream | 1068586 | 66960951 ~ 66961304 (-) |
| LOC110511902 | LOC106609654 | other | upstream | 1188416 | 67079306 ~ 67084695 (-) |
