LOC110512490 (LOC106592130)


Basic Information

Item Value
gene id LOC110512490
gene name LOC106592130
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 65878010 ~ 65892365 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036944971.1
GGTAGGCTGGTACCAGTGCGTTGTGCGAACATTGGCGGTGCTTGCAGGGCACTTTCCCCCACACAGTTCTGCGGATATCTCGCCGTAACAATATCAGAAGAAATGTCGCGCCACTGACGGATTTTACAAGTCGCCCTTGACTTAATCTATACGTTTAAAGACCCGGAGCCCAACACTGTCCCCCCAtggaggagagcggaggagaggtGCATGAGAACCAGGTgttgatggaggagaggggtgtcTCTCCTGGAGATTCCCCAGGGACGGAGGAGGGTTCCCCAGCCGTGGTCCGGCCCCGtgacccccccacctccaccctgCAGGACGCAGGGCCTCGGAAGAGCAGCTCCTCCCGCTCCTCCAGGAAGAGCTTCCGTCTGGACTAccggttggaggaggaggtgactGGGTCGAGCCGGGACAAACATGGCCGCTTCACAAACCCCTGGTCCACGTGGAAGTTCCCGTCCTGGTCCACCCTGCTGCGTTTCTTCCTGCTGGAGAAGGATCACAGTAATGTACCCAGCTCCAAAGAGGTCTTAGACAAAGAGCTCCCAGTAGTGGAGCCTTGGTTCCTCCGTGTCCCCGAGGCAGCCGACGGAGCCGTGGGGTCTGGTCTCAGGGTGACCTGGCTGGGCCACGCATCAGTCCTGGTAGAGATGGACGGCCTGGTCATCCTCACTGACCCCATCTTCAGCCAGAGGGCGTCTCCCTTCCAGTTCATGGGCCCCAAGAGGTACCGGGATCCCCCTTGTACGGTTGATCAACTCCCCCGGATCGACGCGGTTGTCATCAGCCACTCCCACTATGACCATCTGGACGCCGGCACCGTGACCCAGTTGAACGAGCGGTTCGGTGGGGATCTCCGATGGTTTGTGCCGTTGGGACTCATGGACTGGATGCAGAAGAGCGGGTGTGAGAAtgtgatagagttagactggtggGAGGAGAACTGTGTGCCAGGTCACGACGAGGTCACGTTTGTGTGTACACCGGCGCAGCACTGGTGCAAGCGCACCCCCACGGACGATAACCAGGTGCTGTGGGGGAGCTGGTCTGTCCTGGGGCCCTGCAACCGCTTCTTCTTTGCTGGAGACACCGGCTACTGCTCGTCCTTCCAGGAGATTGGGAGGCGCTTTGGTCCGTTCGACCTGGCGGCCATACCCATCGGCGCGtacctgcccagAGATGTAATGCGTGGACAGCATGTGGACCCGGAGGAGGCTGTGCAGATCCACAAAGACATCCAGGCCAGACACTCCCTGGCTATTCACTGGGGAACCTTCGCTTTAGCTTACGAGttttaCTTAGAGCCTCCAGTGAGACTCAGGGAGGCCATGGAGAAGAATGGGTTGAATGTGGAGCACTTCTTTGTCCTGAACCATGGAGAATCCAGAGTGCTGAACACAGACCAGGAAGTCTTTGAATGATTGGACCAAAATGGTGCCTAAGCCCCTCCCACAAGCTGTAGAAGACTAAAACAACACTGTGGCGTAAAGCATACAGCTGAATCAATGGTATAAGCTCTCATCGTCAACAGTCTAGTTGATGGCATACTAGAGAGCTGAATGATGGCGACTATGAAATGAACACCCTGTCCATTTATCCAATCGTTGTTTTTCTATGCCAAATGTCTGACGCCAGAACTGTCAAGAAGAAACCTTTCTGAAAATGTTTTGCAGATGATGTGTTGTCGTATAGCTGCAGTGTCACCAGTCGTGTCAACGTGATGAACGTGTGTATTTtacacactggacacaccacaCGTCATTCTGCTCCGACTCACACATTGTTTCTGTGCACAACTACAATGTGTATGGCTTCATCGTCTAGCACATTCACCAATCACATTTTGTAGCGTTATGTAACCAAATCTTCTGGAGTTATCGAATGCTGAACAGTTCatgtgtaatatactgtaagtACTTGGACGGTGCAATAATGTTTTAGTAGGTCTGGAAACACGCTGTTGTATGTGGGGGTTTTCACCCTCCTCCGTGTTACAGCTGTCATTAAAACTCTGCTCTCTGAAGGACA
>XM_036944970.1
CAACTTTCAAGAGTTCCTGTTGTAAACACAATACCGATACTAGTTTGATGTTTCTATAATTGTAATCTAAGCAATTATGGTTAGGCCAACTAGACCAAGTCAACTAAGCAACGCATTCCGACTATGGCTGCTTCCAAATGCATCTTCACTCCACGAGTTTGGAAAACGACACTTTCAAGGTGTATTCACCGAGCCGCAAGTGTTCTGAACACAGCGAAGGGAACTTTGTCAAGACCCGGAGCCCAACACTGTCCCCCCAtggaggagagcggaggagaggtGCATGAGAACCAGGTgttgatggaggagaggggtgtcTCTCCTGGAGATTCCCCAGGGACGGAGGAGGGTTCCCCAGCCGTGGTCCGGCCCCGtgacccccccacctccaccctgCAGGACGCAGGGCCTCGGAAGAGCAGCTCCTCCCGCTCCTCCAGGAAGAGCTTCCGTCTGGACTAccggttggaggaggaggtgactGGGTCGAGCCGGGACAAACATGGCCGCTTCACAAACCCCTGGTCCACGTGGAAGTTCCCGTCCTGGTCCACCCTGCTGCGTTTCTTCCTGCTGGAGAAGGATCACAGTAATGTACCCAGCTCCAAAGAGGTCTTAGACAAAGAGCTCCCAGTAGTGGAGCCTTGGTTCCTCCGTGTCCCCGAGGCAGCCGACGGAGCCGTGGGGTCTGGTCTCAGGGTGACCTGGCTGGGCCACGCATCAGTCCTGGTAGAGATGGACGGCCTGGTCATCCTCACTGACCCCATCTTCAGCCAGAGGGCGTCTCCCTTCCAGTTCATGGGCCCCAAGAGGTACCGGGATCCCCCTTGTACGGTTGATCAACTCCCCCGGATCGACGCGGTTGTCATCAGCCACTCCCACTATGACCATCTGGACGCCGGCACCGTGACCCAGTTGAACGAGCGGTTCGGTGGGGATCTCCGATGGTTTGTGCCGTTGGGACTCATGGACTGGATGCAGAAGAGCGGGTGTGAGAAtgtgatagagttagactggtggGAGGAGAACTGTGTGCCAGGTCACGACGAGGTCACGTTTGTGTGTACACCGGCGCAGCACTGGTGCAAGCGCACCCCCACGGACGATAACCAGGTGCTGTGGGGGAGCTGGTCTGTCCTGGGGCCCTGCAACCGCTTCTTCTTTGCTGGAGACACCGGCTACTGCTCGTCCTTCCAGGAGATTGGGAGGCGCTTTGGTCCGTTCGACCTGGCGGCCATACCCATCGGCGCGtacctgcccagAGATGTAATGCGTGGACAGCATGTGGACCCGGAGGAGGCTGTGCAGATCCACAAAGACATCCAGGCCAGACACTCCCTGGCTATTCACTGGGGAACCTTCGCTTTAGCTTACGAGttttaCTTAGAGCCTCCAGTGAGACTCAGGGAGGCCATGGAGAAGAATGGGTTGAATGTGGAGCACTTCTTTGTCCTGAACCATGGAGAATCCAGAGTGCTGAACACAGACCAGGAAGTCTTTGAATGATTGGACCAAAATGGTGCCTAAGCCCCTCCCACAAGCTGTAGAAGACTAAAACAACACTGTGGCGTAAAGCATACAGCTGAATCAATGGTATAAGCTCTCATCGTCAACAGTCTAGTTGATGGCATACTAGAGAGCTGAATGATGGCGACTATGAAATGAACACCCTGTCCATTTATCCAATCGTTGTTTTTCTATGCCAAATGTCTGACGCCAGAACTGTCAAGAAGAAACCTTTCTGAAAATGTTTTGCAGATGATGTGTTGTCGTATAGCTGCAGTGTCACCAGTCGTGTCAACGTGATGAACGTGTGTATTTtacacactggacacaccacaCGTCATTCTGCTCCGACTCACACATTGTTTCTGTGCACAACTACAATGTGTATGGCTTCATCGTCTAGCACATTCACCAATCACATTTTGTAGCGTTATGTAACCAAATCTTCTGGAGTTATCGAATGCTGAACAGTTCatgtgtaatatactgtaagtACTTGGACGGTGCAATAATGTTTTAGTAGGTCTGGAAACACGCTGTTGTATGTGGGGGTTTTCACCCTCCTCCGTGTTACAGCTGTCATTAAAACTCTGCTCTCTGAAGGACA

Function

NR:

description
N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D isoform X1

GO: NA

KEGG:

id description
K13985 NAPEPLD; N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036944971.1 False 2040 mRNA 0.54 6 65878010 65891457
XM_036944970.1 True 2113 mRNA 0.53 6 65878010 65892365

Neighbor

gene id symbol gene type direction distance location
LOC110517393 LOC106576623 coding downstream 574876 65268990 ~ 65303134 (-)
LOC110513258 cacna2d4 coding downstream 646347 65153383 ~ 65231663 (-)
LOC118938827 LOC106576471 coding downstream 819367 65021405 ~ 65058643 (-)
LOC118938826 NA coding downstream 863599 64995972 ~ 65014411 (-)
LOC110510812 NA coding downstream 877031 64997957 ~ 65000979 (-)
LOC110511373 LOC106592131 coding upstream 83 65892448 ~ 65898819 (-)
LOC110511371 LOC106597280 coding upstream 9377 65901742 ~ 65979435 (-)
LOC110499707 LOC106609801 coding upstream 89276 65981641 ~ 65986435 (-)
LOC110500955 cpsf6 coding upstream 95567 65987246 ~ 66009466 (-)
LOC110499708 LOC106576651 coding upstream 140696 66033061 ~ 66047899 (-)
G1319094 NA non-coding downstream 10275 65866213 ~ 65867735 (-)
G1319095 LOC106576667 non-coding downstream 14129 65860095 ~ 65863881 (-)
G1319108 NA non-coding downstream 27818 65847523 ~ 65850192 (-)
G1319069 NA non-coding downstream 53366 65786250 ~ 65824644 (-)
G1319084 NA non-coding downstream 61209 65816275 ~ 65816801 (-)
G1319116 NA non-coding upstream 29827 65922192 ~ 65924248 (-)
G1319119 NA non-coding upstream 38314 65930679 ~ 65930929 (-)
G1319120 NA non-coding upstream 39723 65932088 ~ 65932300 (-)
G1319126 NA non-coding upstream 60566 65952931 ~ 65953255 (-)
G1319128 NA non-coding upstream 67286 65959651 ~ 65960031 (-)
G1318935 NA other downstream 404846 65469967 ~ 65473164 (-)
G1318477 NA other downstream 726610 65068277 ~ 65153287 (-)
LOC110499867 LOC106576572 other downstream 1392692 64481916 ~ 64636502 (-)
G1318164 LOC106576481 other downstream 1650335 64216504 ~ 64227675 (-)
G1318092 NA other downstream 1794122 64083037 ~ 64083888 (-)
G1319357 LOC106593594 other upstream 386680 66279045 ~ 66282108 (-)
LOC110490781 LOC106576552 other upstream 916082 66808409 ~ 66920061 (-)
G1319781 LOC106576551 other upstream 963814 66856179 ~ 66862281 (-)
G1319847 NA other upstream 1068586 66960951 ~ 66961304 (-)
LOC110511902 LOC106609654 other upstream 1188416 67079306 ~ 67084695 (-)

Expression


Co-expression Network