XLOC_031640 (eif4e1b)


Basic Information

Item Value
gene id XLOC_031640
gene name eif4e1b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 67785991 ~ 67799821 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061281
CCTGGTGTTTGGTCTATCCAAGCACAATAATTGAAACTATTATCAATTAAGATATATTATGTAGACTAAACCAAGGTGTTGCTAATACGTTTCATGTTATTTTGAAAGATTAGTAACTAAGTTTGCAATAATTTCaaagtataattaaataatttcaaaacgCCGTTATGAAGTAATAAATGAGCGCGGCCACGAGCCTCAATCACTCTCGCGCGCAACAGGATTAACTTAACATGGCGTCGTGTGCTGTACAACTGATTGATAAAGTACCGAAGAAGAAGGTTGAGAAAAAGAAATTCGAACCAAACATCTTGAAGGAGCCTTGTATGAAGCACCCTTTACAAAACAGATGGGGACTTTGGTTCTACAAGAATGATAAGAGCAAAATGTGGCAGGACAATCTAAGGCTCATCACCAAATTCGACACGGTCGAGGACTTCTGGGGATTGTATAACAACATACAGCTACCAAGCAAACTGTCCTCTGGCTGTGACTACTCCATGTTCAAGGATGGCATAGAGCCCATGTGGGAAGACCGGAGTAATAAATGTGGCGGCCGCTGGTTAATTACTTTAGCCAAGCAACATAGGCACACTGAACTTGACCATTTCTGGCTGGAAACGTTGCTGTGTCTTATTGGTGAGGGCTTCAGCTCCTTTAGTCGGGATATCTGTGGAAGTGTAATCAACATCCGTGCCAAAGGGGACAAAATTGCTCTCTGGACATCCAATGCTGAGAACTGTGAGACGGTCACATATATAGGTCGAAAGTATAAGGAAAGTCTGGGACTCCCGCAGAAACTTGTGATTGGATATCAAGCCCATGCAGACACCGCAACTAAGAGCAACTCCATAACCAAAAACAAGTTTGTTGTTTAAAAGTGGGCTTTAGTTGGATTGATGGAGAAGCGTCGATTGTTGTATTGGTCAAAGAGTCATCAtcttgtattgatttttttttgttgttgcattcACCTCTGGCTGTAACTTAATTCAACTTGAAAATATGCAAGACTTTGTGAACGTCGGACCTCTTTGAGTTGTGAATTTTGTGGTATTTGTGTCAAAGATGCCAAGACCTTTTTTCTTCAAATTAAAACATGATCTACTTTAGCACGTGCTTCTATGGCTGCATGCGATTGTGGAGAGAAAATATTTCAGTTTCTAGAAAATGTAGCTGTAATGTACATTAGTGGCTAAATGAATGTTCAGCGCAGCCTAGGAAAATGTATACCCTTGCTATTTATTCAGACAACCGTTGTTATATTGACATGGGTTTTCAAAGCATACTAGGGTTGTCgcaatactggaattcgataccaactgttacagaaattttaaaaacgtccaacAAACTAACATTTGatcactgatttgccattgtgttcctGTACTCAACAAAAAtcactgtgattggccgtgaaggtcatcagttcaccgaaatgaccgctgtttactgagtgtaaacacagatacagggacattgAAACCTTTTAAAGTCATGAAGATGAgttgattcatcagcggatcactcTTATGTCAGCTTTTAGACAAACCAGATGATCAACgtgactttgaaatgctccagtgtccctgtatcggTGTTCACACcataaacagcggtgagttcggtgaattGATGACCTTCACCGCCAAcctcagtcatttctgttgagcatgtgaacacaatagcaaatcaAGCGGTGTTTGAGCGAgttcaacagcgctcaaatgttagcaggaaatggatgtcttttaaaatttcagtattaattggtaccgaattccagtatcaagACATATTGCATGCTTTATTATAATATAGGAAGCGTGCTTATTTAGGCATGCACAAAAGAATGGCTGGTAATCATATATAAGGGAGAAACAGTGAaatgataattattatattaaccaCTTGTATTTAGGTCCCTGTGCACTTTATTTTTGTgaatatattctttttttgtgCGTTTCTTTGCATAGCACAattaaaaaaagctgtttttttggCACAAAGAACCAATGGGCTTAATATGGAGGTAATTCAAGCAAATATGCTAATAGGCCCACTGAGCATCACTTTTGAGCACATGTAAAAGTCagttagtttattatttaaagcacaattggtgaagtttgccTATCAGTAACAATCTAGGCTAATTGGCATGTTTATGGTATTCATTTTTCCACATAATATAAAGcgggggtcaccaaccctgttcctggcgagctaccttcctgcagatttcagttgcaaccctgaccaaacacgcCTGCTTGTAATTATTAAGTGCtactttaggtactattaattggttcaggtgtgtttgatcagggttgggactgtattctgcaggaaggtagctctccaggaacagggatggtgacccctgatataaagTATATGCAGGATCTGGTTTAGTATTGCACACGACATTATAGGTCATTCTGCCAGAAGTCCTGCCTGAAATACGGCTAGGCAACTAATAAAATGGTATTGaccatgatagatagatagatagatagatagatagatagatagagggatagatagatagatagacagacagacagacagacacacagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagacagacggacggacggacggacggacggacggacggacagacagatagatagatagaaagatagtgACTTGGAAGTTGTGGAGATTTACATGCTCATTGTCATTTATCTAATTGTATTTAAAACAGGACTTCAGGTAAAATGACCAGTTGTCAGACAATGACTCTTGTCTCGTGTATTAATTTTATATTCTGCGTCTCCATCATATTTACAAAAGTGAATACTATAAACATGTCAATTAGCCTAGATTTGTACAGACAGACATAATTCACCAATTAAGCTCATTCATCCCATTAGTGAAAAGATGCATTTCAGTTCTTATCAACTCatgttttagattatttttgAATGCAAGCGAATTGTAATAACTCTTGAAAGTCAAGTTGAAATGTTTATGAATGCAGAAAACTTAAAAGAAAATCAGCTATTTTTGTTTAAAA
>TCONS_00061282
ACTCTCGCGCGCAACAGGATTAACTTAACATGGCGTCGTGTGCTGTACAACTGGTGAGCAATAGTGTCCAAAACGTTACAAAGCTCTCATTTAACCACATACACACGTCAGTCTTTTAATATATGCGCTGTTTTACCTGAGATTGATAAAGTACCGAAGAAGAAGGTTGAGAAAAAGAAATTCGAACCAAACATCTTGAAGGAGCCTTGTATGAAGCACCCTTTACAAAACAGATGGGGACTTTGGTTCTACAAGAATGATAAGAGCAAAATGTGGCAGGACAATCTAAGGCTCATCACCAAATTCGACACGGTCGAGGACTTCTGGGGATTGTATAACAACATACAGCTACCAAGCAAACTGTCCTCTGGCTGTGACTACTCCATGTTCAAGGATGGCATAGAGCCCATGTGGGAAGACCGGAGTAATAAATGTGGCGGCCGCTGGTTAATTACTTTAGCCAAGCAACATAGGCACACTGAACTTGACCATTTCTGGCTGGAAACGTTGCTGTGTCTTATTGGTGAGGGCTTCAGCTCCTTTAGTCGGGATATCTGTGGAAGTGTAATCAACATCCGTGCCAAAGGGGACAAAATTGCTCTCTGGACATCCAATGCTGAGAACTGTGAGACGGTCACATATATAGGTCGAAAGTATAAGGAAAGTCTGGGACTCCCGCAGAAACTTGTGATTGGATATCAAGCCCATGCAGACACCGCAACTAAGAGCAACTCCATAACCAAAAACAAGTTTGTTGTTTAAAAGTGGGCTTTAGTTGGATTGATGGAGAAGCGTCGATTGTTGTATTGGTCAAAGAGTCATCAtcttgtattgatttttttttgttgttgcattcACCTCTGGCTGTAACTTAATTCAACTTGAAAATATGCAAGACTTTGTGAACGTCGGACCTCTTTGAGTTGTGAATTTTGTGGTATTTGTGTC

Function

symbol description
eif4e1b Predicted to enable translation initiation factor activity. Predicted to be involved in regulation of translation. Predicted to act upstream of or within translational initiation. Predicted to be located in cytoplasm and nucleus. Predicted to be part of eukaryotic translation initiation factor 4F complex and mRNA cap binding activity complex. Is expressed in several structures, including blastomere; hematopoietic cell; oocyte; optic vesicle; and segmental plate. Orthologous to human EIF4E1B (eukaryotic translation initiation factor 4E family member 1B).

GO:

id name namespace
GO:0006412 translation biological_process
GO:0006413 translational initiation biological_process
GO:0005845 mRNA cap binding complex cellular_component
GO:0005634 nucleus cellular_component
GO:0016281 eukaryotic translation initiation factor 4F complex cellular_component
GO:0005737 cytoplasm cellular_component
GO:0003723 RNA binding molecular_function
GO:0003743 translation initiation factor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-980526-127 Predicted to enable translation initiation factor activity. Predicted to be involved in regulation of translation. Predicted to act upstream of or within translational initiation. Predicted to be located in cytoplasm and nucleus. Predicted to be part of eukaryotic translation initiation factor 4F complex and mRNA cap binding activity complex. Is expressed in several structures, including blastomere; hematopoietic cell; oocyte; optic vesicle; and segmental plate. Orthologous to human EIF4E1B (eukaryotic translation initiation factor 4E family member 1B).

Ensembl:

ensembl_id ENSDARG00000014565

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061281 False 3086 mRNA 0.38 7 67785991 67799821
TCONS_00061282 True 948 mRNA 0.43 7 67788013 67799617

Neighbor

gene id symbol gene type direction distance location
XLOC_031639 casr coding downstream 2398 67768162 ~ 67783593 (-)
XLOC_031638 b4galt4 coding downstream 23557 67736822 ~ 67762434 (-)
XLOC_031637 arhgap31 coding downstream 64623 67671207 ~ 67721368 (-)
XLOC_031636 zbtb20 coding downstream 124889 67533180 ~ 67661102 (-)
XLOC_031635 UTP14C coding downstream 286712 67474119 ~ 67499279 (-)
XLOC_031641 tagln3a coding upstream 69964 67869785 ~ 67878064 (-)
XLOC_031642 abhd10a coding upstream 84266 67884087 ~ 67895855 (-)
XLOC_031643 gsx1 coding upstream 109823 67909644 ~ 67911111 (-)
XLOC_031644 NA coding upstream 164686 67964507 ~ 67972342 (-)
XLOC_031645 gtf3aa coding upstream 180366 67980187 ~ 67993086 (-)
XLOC_031627 BX897741.1 non-coding downstream 621572 67161442 ~ 67164419 (-)
XLOC_031620 CU929288.1 non-coding downstream 1248657 66537217 ~ 66537334 (-)
XLOC_031616 NA non-coding downstream 1541859 66239915 ~ 66244132 (-)
XLOC_031612 NA non-coding downstream 1761047 66022664 ~ 66024944 (-)
XLOC_031608 NA non-coding downstream 2111356 65670605 ~ 65674635 (-)
XLOC_031650 CABZ01083943.1 non-coding upstream 406131 68205952 ~ 68214334 (-)
XLOC_031655 LO017735.1 non-coding upstream 818137 68617958 ~ 68618089 (-)
XLOC_031656 NA non-coding upstream 822277 68622098 ~ 68668542 (-)
XLOC_031659 NA non-coding upstream 1014102 68813923 ~ 68816110 (-)

Expression


Co-expression Network