LOC110511902 (LOC106609654)


Basic Information

Item Value
gene id LOC110511902
gene name LOC106609654
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 67079306 ~ 67084695 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036945032.1
CATCATACCTCAGTGGGAGCGACTTGGAATTATGACGTGCTCTGTGACGTTTTTTTTTTGCTACCAGGAAACGAATGTAAACATAGCAATCGGAAGAGAAACGCGAATGCATTCGCATAATTCCACAAAAAAATCTATCGATGCTGGGTGCTAAATACGATTTTGCAGCACTGGGCGAAATGGGGTTAGCTGGAATATATGATTGCCAATTCTAGAAAAGGTTTAACGCAGTAGCTAGGACTGAGGCTGGCTAATCGCTCGATAAACCGACACACATCCACTTCGGGGTGCAGAGAATTTGCAACAAGCTGATGACATGTCGGCAGACTGTTCTTCTGCCAACCAGGAAGAACCTAATGCTGTTGTTGGAAACATATTGGTGCAGTTCATATAGGTCCAGGCATGTTTGCCATAAGGGCACCTGAGGAGGAGTCCTCAGAGATGGTGGAGGAGATGGACACGTCAGAGGCTGTCTGGTGCTGGTATTACCTAGCTGAATGTGGAGTGTGGCACATGTTTGAGATTGATCCAAGTGCTGCATGCTCTGTGACCAGTGAGCAGATAGAACAGAATTACAGCAGGAATCAACACGGTGTCATGGAGTTTTACACCGCCAAGTACACCTACAGACTGGACTTCTCAGTCATGAAGCAGATCAATGTCACAACCGGGAAACAACGGCCAATCAAACGGGCATTCCACTCTGCCACTGGCTTTAGGTTCATTTGTGATAATCTGGCCCTGCCGGTGCCCTGCCACTGGGAGAGAATAAATACAGACGAGCCTTATCAGCTCGTCTCATTGGCCAGAGATACTTATGAATTCAAGGAAGTGGTCAGACTCTATGAAAGGACCATGTGTCACCCTATCAAATCTATTCAGAGGATACAGAACCTGGATCTGTGGGAGTTCTTTTGcagGAAAAAACAACAATTGCGCAAGATAAAGCGAGTTGTGGACATTGAGGAGAAAATGTTATTTCATGGCACAGGCCACAGCAACGTGCAGGCTATATGCACATATAACTTTGACTGGCGTCTAACTGGGAGCCATGGGGACGTCTATGGCAGAGGGAGTTATTTCGCCCGAGACGCCAAGTATTCTAGCAAATTCTGCCTTACGACGGGGAAACACAACTTTGCCTTGCAGAAGCACGGACTAGCCCCGCCGATATTTTCAAGCGAGCCTCCATATAAGACCATGTTCCTGGCCAGAGTGCTGGTCGGCGAGTCCACGTTAGGCAATCCGCTGTTCTGCCGACCGCCATCCAAGGACATGAGCTACAGCAACTTCTTTGACAGCTGTGTGGATGACCTCGCCAACCCAAAGATCTACGTCATCTTCGATTGCAACCAGATTTACCCAGAGTATCTGATTGAGTTCTACTGACGCCTATGGGGTGATCAGGGACGTTATCACACAATGTACAGGGGGTGGATTGTTTTTTACCAGGACGGGATTGGGATTCAGAAACATCAGGGGAGAGGTCGAGAGAGGAGGGACTTAATGGACGGCCATGATGACTTCCCGCTGTTTGATTCCAGGCCCGACTGGGACTTGGATCATAAGATGTGCCTTAATGGATTACTATGGCAGAACAAGGAAGACCATACAAGAAGACTATGTTTCTATAAAAGCTGTAGAGTTCGTAAAGAGTGGTTTGTCTATTTACTGTGTTTAGAGACTTGTGGGTTGGAGAGGGCGAGAGGTGGCGTATTTGAAAAACAGAAAAGTAACTGCACACTGTTTGAGTGTTCCCGAAATGGATTAGCAATGTTTCAAGGCAGGATCACCTTGTGTTGTCGAAACGTTGCGAATACGTTTCGGGAGCGTTCTAACAGTGGGCaggtattatttttttattttcctttGACTGTTTGGGTCCAACATGACCATAGTCAAACAAAGCTAAAAAGTGCAACACACTTCTAATGAGGATGTAGACTGAATAACTACTTTGGTGACCAGGATGCAATAACTCACTATTACAAGTGAAGTCGCCAACATAAAGTAAACACATGTTTGACTTGCCCTACTCCTGTATACAAGGACCTGATTTCATAGATAGACATTGAATAAGTAGGTGTATCTAAATGTTTGTATAAGGGATATATTCATTGTAACTGTACAGTAATCTGCTCttgtaatattttctacattgtagaataatagtgaagacatcaaaactatgaaataacacatatggaatcacgtagtaaccaaata
>XM_036945033.1
GCATCATACCTCAGTGGGAGCGACTTGGAATTATGACGTGCTCTGTGACGTTTTTTTTTTGCTACCAGGAAACGAATGTAAACATAGCAATCGGAAGAGAAACGCGAATGCATTCGCATAATTCCACAAAAAAATCTATCGATGCTGGGTGCTAAATACGATTTTGCAGCACTGGGCGAAATGGGGTTAGCTGGAATATATGATTGCCAATTCTAGAAAAGGTTTAACGCAGTAGCTAGGACTGAGGCTGGCTAATCGCTCGATAAACCGGTCCAGGCATGTTTGCCATAAGGGCACCTGAGGAGGAGTCCTCAGAGATGGTGGAGGAGATGGACACGTCAGAGGCTGTCTGGTGCTGGTATTACCTAGCTGAATGTGGAGTGTGGCACATGTTTGAGATTGATCCAAGTGCTGCATGCTCTGTGACCAGTGAGCAGATAGAACAGAATTACAGCAGGAATCAACACGGTGTCATGGAGTTTTACACCGCCAAGTACACCTACAGACTGGACTTCTCAGTCATGAAGCAGATCAATGTCACAACCGGGAAACAACGGCCAATCAAACGGGCATTCCACTCTGCCACTGGCTTTAGGTTCATTTGTGATAATCTGGCCCTGCCGGTGCCCTGCCACTGGGAGAGAATAAATACAGACGAGCCTTATCAGCTCGTCTCATTGGCCAGAGATACTTATGAATTCAAGGAAGTGGTCAGACTCTATGAAAGGACCATGTGTCACCCTATCAAATCTATTCAGAGGATACAGAACCTGGATCTGTGGGAGTTCTTTTGcagGAAAAAACAACAATTGCGCAAGATAAAGCGAGTTGTGGACATTGAGGAGAAAATGTTATTTCATGGCACAGGCCACAGCAACGTGCAGGCTATATGCACATATAACTTTGACTGGCGTCTAACTGGGAGCCATGGGGACGTCTATGGCAGAGGGAGTTATTTCGCCCGAGACGCCAAGTATTCTAGCAAATTCTGCCTTACGACGGGGAAACACAACTTTGCCTTGCAGAAGCACGGACTAGCCCCGCCGATATTTTCAAGCGAGCCTCCATATAAGACCATGTTCCTGGCCAGAGTGCTGGTCGGCGAGTCCACGTTAGGCAATCCGCTGTTCTGCCGACCGCCATCCAAGGACATGAGCTACAGCAACTTCTTTGACAGCTGTGTGGATGACCTCGCCAACCCAAAGATCTACGTCATCTTCGATTGCAACCAGATTTACCCAGAGTATCTGATTGAGTTCTACTGACGCCTATGGGGTGATCAGGGACGTTATCACACAATGTACAGGGGGTGGATTGTTTTTTACCAGGACGGGATTGGGATTCAGAAACATCAGGGGAGAGGTCGAGAGAGGAGGGACTTAATGGACGGCCATGATGACTTCCCGCTGTTTGATTCCAGGCCCGACTGGGACTTGGATCATAAGATGTGCCTTAATGGATTACTATGGCAGAACAAGGAAGACCATACAAGAAGACTATGTTTCTATAAAAGCTGTAGAGTTCGTAAAGAGTGGTTTGTCTATTTACTGTGTTTAGAGACTTGTGGGTTGGAGAGGGCGAGAGGTGGCGTATTTGAAAAACAGAAAAGTAACTGCACACTGTTTGAGTGTTCCCGAAATGGATTAGCAATGTTTCAAGGCAGGATCACCTTGTGTTGTCGAAACGTTGCGAATACGTTTCGGGAGCGTTCTAACAGTGGGCaggtattatttttttattttcctttGACTGTTTGGGTCCAACATGACCATAGTCAAACAAAGCTAAAAAGTGCAACACACTTCTAATGAGGATGTAGACTGAATAACTACTTTGGTGACCAGGATGCAATAACTCACTATTACAAGTGAAGTCGCCAACATAAAGTAAACACATGTTTGACTTGCCCTACTCCTGTATACAAGGACCTGATTTCATAGATAGACATTGAATAAGTAGGTGTATCTAAATGTTTGTATAAGGGATATATTCATTGTAACTGTACAGTAATCTGCTCttgtaatattttctacattgtagaataatagtgaagacatcaaaactatgaaataacacatatggaatcacgtagtaaccaaata
>TU1506555
TCGGAAGAGAAACGCGAATGCATTCGCATAATTCCACAAAAAAATCTATCGATGCTGGGTGCTAAATACGATTTTGCAGCACTGGGCGAAATGGGGTTAGCTGGAATATATGATTGCCAATTCTAGAAAAGGTTTAACGCAGTAGCTAGGACTGAGGCTGGCTAATCGCTCGATAAACCGACACACATCCACTTCGGGGTGCAGAGAATTTGCAACAAGCTGATGACATGTCGGCAGACTGTTCTTCTGCCAACCAGGAAGAACCTAATGCTGTTGTTGGAAACATATTGGTGCAGTTCATATAGGTCCAGGCATGTTTGCCATAAGGGCACCTGAGGAGGAGTCCTCAGAGATGGTGGAGGAGATGGACACGTCAGAGGCTGTCTGGTGCTGGTATTACCTAGCTGAATGTGGAGTGTGGCACATGTTTGAGATTGATCCAAGTGCTGCATGCTCTGTGACCAGTGAGCAGATAGAACAGAATTACAGCAGGAATCAACACGGTGTCATGGAGTTTTACACCGCCAAGTACACCTACAGACTGGACTTCTCAGTCATGAAGCAGATCAATGTCACAACCGGGAAACAACGGCCAATCAAACGGGCATTCCACTCTGCCACTGGCTTTAGGTTCATTTGTGATAATCTGGCCCTGCCGGTGCCCTGCCACTGGGAGAGAATAAATACAGACGAGCCTTATCAGCTCGTCTCATTGGCCAGAGATACTTATGAATTCAAGGAAGTGGTCAGACTCTATGAAAGGACCATGTGTCACCCTATCAAATCTATTCAGAGGATACAGAACCTGGATCTGTGGGAGTTCTTTTGcagGAAAAAACAACAATTGCGCAAGATAAAGCGAGTTGTGGACATTGAGGAGAAAATGTTATTTCATGGCACAGGCCACAGC

Function

NR:

description
poly [ADP-ribose] polymerase 11-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036945032.1 False 2226 mRNA 0.45 9 67079306 67084694
XM_036945033.1 False 2102 mRNA 0.45 8 67079306 67084695
TU1506555 True 910 TUCP 0.47 8 67080781 67084605

Neighbor

gene id symbol gene type direction distance location
LOC118938832 LOC106609653 coding downstream 3672 67071314 ~ 67075634 (-)
LOC110490598 LOC106576550 coding downstream 136556 66940740 ~ 66942750 (-)
LOC110490597 LOC106609625 coding downstream 138638 66924042 ~ 66940668 (-)
LOC110490781 LOC106576552 coding downstream 159245 66808409 ~ 66920061 (-)
LOC110501008 LOC105020375 coding downstream 366274 66655198 ~ 66713032 (-)
LOC110501001 LOC106609634 coding upstream 70729 67155424 ~ 67350716 (-)
LOC110499840 LOC106609638 coding upstream 286687 67371382 ~ 67378695 (-)
LOC118938833 LOC106608919 coding upstream 700522 67785217 ~ 67797863 (-)
LOC118938834 LOC106593864 coding upstream 716379 67801074 ~ 67803118 (-)
LOC110501000 LOC106576558 coding upstream 725888 67810583 ~ 67922051 (-)
G1320090 NA non-coding downstream 9335 67069232 ~ 67069971 (-)
G1320057 NA non-coding downstream 49620 67026419 ~ 67029686 (-)
G1320031 NA non-coding downstream 81926 66996615 ~ 66997380 (-)
G1319849 NA non-coding downstream 116251 66962738 ~ 66963055 (-)
G1319846 NA non-coding downstream 119146 66959930 ~ 66960160 (-)
G1320095 NA non-coding upstream 8400 67093095 ~ 67094267 (-)
G1320096 NA non-coding upstream 9718 67094413 ~ 67095337 (-)
G1320098 NA non-coding upstream 12252 67096947 ~ 67097393 (-)
G1320102 NA non-coding upstream 20116 67104811 ~ 67105652 (-)
G1320083 NA non-coding upstream 27656 67112351 ~ 67155292 (-)
G1319847 NA other downstream 118002 66960951 ~ 66961304 (-)
G1319781 LOC106576551 other downstream 217025 66856179 ~ 66862281 (-)
G1319357 LOC106593594 other downstream 797198 66279045 ~ 66282108 (-)
G1318935 NA other downstream 1606142 65469967 ~ 65473164 (-)
G1320139 NA other upstream 108421 67193116 ~ 67193493 (-)
LOC110513021 exoc4 other upstream 987706 67998532 ~ 68239937 (-)
G1321652 nrf1 other upstream 1946331 69031026 ~ 69073276 (-)
LOC110490790 LOC106609779 other upstream 2070831 69149477 ~ 69163694 (-)

Expression


Co-expression Network