Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110513021 |
| gene name | exoc4 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 67998532 ~ 68239937 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| exoc4 | Predicted to be involved in Golgi to plasma membrane transport; chemical synaptic transmission; and exocytosis. Predicted to act upstream of or within protein transport; vesicle docking involved in exocytosis; and vesicle tethering involved in exocytosis. Predicted to be part of exocyst. Predicted to be active in growth cone membrane and synapse. Orthologous to human EXOC4 (exocyst complex component 4). |
| description |
|---|
| exocyst complex component 4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036945079.1 | False | 4958 | mRNA | 0.51 | 18 | 67998532 | 68239937 |
| TU1508037 | False | 1697 | lncRNA | 0.43 | 1 | 67998539 | 68000235 |
| TU1508038 | True | 654 | TUCP | 0.55 | 5 | 68072401 | 68176382 |
67,920,000
67,960,000
68,000,000
68,040,000
68,080,000
68,120,000
68,160,000
68,200,000
68,240,000
68,280,000
68,320,000
68,360,000
68,400,000
NC_048579.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500996 | LOC106609604 | coding | downstream | 611 | 67966234 ~ 67997921 (-) |
| LOC110501000 | LOC106576558 | coding | downstream | 76481 | 67810583 ~ 67922051 (-) |
| LOC118938834 | LOC106593864 | coding | downstream | 195414 | 67801074 ~ 67803118 (-) |
| LOC118938833 | LOC106608919 | coding | downstream | 200669 | 67785217 ~ 67797863 (-) |
| LOC110499840 | LOC106609638 | coding | downstream | 619837 | 67371382 ~ 67378695 (-) |
| LOC110490613 | ube2h | coding | upstream | 844868 | 69084805 ~ 69114891 (-) |
| LOC110490606 | LOC106609763 | coding | upstream | 878840 | 69118777 ~ 69127452 (-) |
| LOC110490790 | LOC106609779 | coding | upstream | 909540 | 69149477 ~ 69163694 (-) |
| smo | LOC106609776 | coding | upstream | 924218 | 69164155 ~ 69184500 (-) |
| LOC110490615 | tspan33 | coding | upstream | 944718 | 69184655 ~ 69201940 (-) |
| G1321274 | NA | non-coding | downstream | 9617 | 67988553 ~ 67988915 (-) |
| G1321267 | NA | non-coding | downstream | 27499 | 67970319 ~ 67971033 (-) |
| G1321255 | NA | non-coding | downstream | 47194 | 67951111 ~ 67951338 (-) |
| G1321254 | NA | non-coding | downstream | 49297 | 67948654 ~ 67949235 (-) |
| G1321253 | NA | non-coding | downstream | 50545 | 67947691 ~ 67947987 (-) |
| G1321395 | NA | non-coding | upstream | 45870 | 68285807 ~ 68286919 (-) |
| G1321428 | NA | non-coding | upstream | 111924 | 68351861 ~ 68353463 (-) |
| G1321443 | NA | non-coding | upstream | 166268 | 68406205 ~ 68433144 (-) |
| G1321453 | NA | non-coding | upstream | 182367 | 68422304 ~ 68423465 (-) |
| G1321458 | NA | non-coding | upstream | 203778 | 68443715 ~ 68443971 (-) |
| G1320139 | NA | other | downstream | 805039 | 67193116 ~ 67193493 (-) |
| LOC110511902 | LOC106609654 | other | downstream | 913927 | 67079306 ~ 67084695 (-) |
| G1319847 | NA | other | downstream | 1037228 | 66960951 ~ 66961304 (-) |
| G1319781 | LOC106576551 | other | downstream | 1136251 | 66856179 ~ 66862281 (-) |
| G1321652 | nrf1 | other | upstream | 791089 | 69031026 ~ 69073276 (-) |
| G1321729 | NA | other | upstream | 980366 | 69220303 ~ 69223028 (-) |
| G1321997 | NA | other | upstream | 1322373 | 69562310 ~ 69563040 (-) |
| G1322348 | NA | other | upstream | 1658748 | 69897748 ~ 69899703 (-) |
| G1321277 | NA | non-coding | upstream | 1317 | 68001552 ~ 68001931 (-) |
| G1321278 | NA | non-coding | upstream | 2210 | 68002445 ~ 68002723 (-) |
| G1321279 | NA | non-coding | upstream | 5669 | 68005904 ~ 68006161 (-) |
| G1321284 | NA | non-coding | upstream | 17069 | 68017304 ~ 68017799 (-) |
| G1321293 | NA | non-coding | upstream | 43208 | 68043443 ~ 68043832 (-) |
| LOC110513021 | exoc4 | other | upstream | 72166 | 67998532 ~ 68239937 (-) |
| G1321298 | NA | non-coding | downstream | 7532 | 68050654 ~ 68064869 (-) |
| G1321352 | NA | non-coding | upstream | 4270 | 68180652 ~ 68180984 (-) |
| G1321353 | NA | non-coding | upstream | 4898 | 68181280 ~ 68181482 (-) |
| G1321359 | NA | non-coding | upstream | 13261 | 68189643 ~ 68190139 (-) |
| G1321363 | NA | non-coding | upstream | 15972 | 68192354 ~ 68192782 (-) |
| G1321365 | NA | non-coding | upstream | 20936 | 68197318 ~ 68197549 (-) |
| LOC110490781 | LOC106576552 | other | downstream | 1176709 | 66808409 ~ 66920061 (-) |
