XLOC_031644


Basic Information

Item Value
gene id XLOC_031644
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 67964507 ~ 67972342 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062149
agATCaagtctttatttctgagaacaTTGATCATAATTTTGCTGGTTTATGAttgaaaaaagaacaaatatcTGTCAGTTGgctcaaaaaaaaacaattaaatgctattttgttttgtttttttaaagcattaactCAAAAACATTCGTTCATTTTGTACATCACAGCAATGTATTGTTTAACGTTAGATAAACCTATATCAAGCTTATATTAAGTTAGACACGcttatgtttttgtgtgtattaatGTTACGGTTGTCATCTGAATACTTTAAGCTCTGATTTGACTCGTTGGGAATCGTGGAACAGTTAAACCGAAGAAGCTCCGACATGGTCAGAATATAAACCACTAACTACGTGACAAAAATTTGAGATGAATAACTTCGGTATTGTGGGCAACGCCTCTCTGaatctcaagtctgctgacgtacgTGGCGAGCTACTGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062149 True 445 lncRNA 0.34 2 67964507 67972342

Neighbor

gene id symbol gene type direction distance location
XLOC_031643 gsx1 coding downstream 53396 67909644 ~ 67911111 (-)
XLOC_031642 abhd10a coding downstream 68652 67884087 ~ 67895855 (-)
XLOC_031641 tagln3a coding downstream 86443 67869785 ~ 67878064 (-)
XLOC_031640 eif4e1b coding downstream 164686 67785991 ~ 67799821 (-)
XLOC_031639 casr coding downstream 180914 67768162 ~ 67783593 (-)
XLOC_031645 gtf3aa coding upstream 7845 67980187 ~ 67993086 (-)
XLOC_031646 wasf3a coding upstream 34830 68007172 ~ 68022631 (-)
XLOC_031647 rnf167 coding upstream 65287 68037629 ~ 68058168 (-)
XLOC_031648 spag7 coding upstream 87582 68059924 ~ 68074592 (-)
XLOC_031649 slc25a11 coding upstream 104571 68076913 ~ 68093169 (-)
XLOC_031627 BX897741.1 non-coding downstream 800088 67161442 ~ 67164419 (-)
XLOC_031620 CU929288.1 non-coding downstream 1427173 66537217 ~ 66537334 (-)
XLOC_031616 NA non-coding downstream 1720375 66239915 ~ 66244132 (-)
XLOC_031612 NA non-coding downstream 1939563 66022664 ~ 66024944 (-)
XLOC_031608 NA non-coding downstream 2289872 65670605 ~ 65674635 (-)
XLOC_031650 CABZ01083943.1 non-coding upstream 233610 68205952 ~ 68214334 (-)
XLOC_031655 LO017735.1 non-coding upstream 645616 68617958 ~ 68618089 (-)
XLOC_031656 NA non-coding upstream 649756 68622098 ~ 68668542 (-)
XLOC_031659 NA non-coding upstream 841581 68813923 ~ 68816110 (-)
XLOC_031662 NA non-coding upstream 918135 68890477 ~ 68893011 (-)

Expression


Co-expression Network