LOC118936535 (LOC106597692)


Basic Information

Item Value
gene id LOC118936535
gene name LOC106597692
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 69611623 ~ 69614219 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036945124.1
AAACTGTGCGTATCAGTCACACCAGCGACCGCTGCCGACGGACTAGTATCAAATACCCTGCACACACATCCACGAGTTCCACAGCACATAGTAACCCACTCACTGCAGTGACCATTTCAGCATCCGATGCCTTTACCTCTACGGGCAAGGAGAAGAAGAAGTGTTTGCATTTGCTGAGAAAATTGGGGCGTTTTCTCAAGATGCTGGAGAACGGCGGCAAGGTGCTGAAAGAGGGGCTTCTGGAGAAGCGAAGCGACGGTTTGCTGCAGCTGTGGAAGAAGAAGCACTGCGTCCTCACGGAGGACGGGGTTCTGCTTCACCCGCCGAAGCAGCACGACCACCCGCACCATTACAACCACCACGGCGGCGGAGACACTGGCAAAGTCAAGGAGCTGCACTTCTCCAACATGAAAACTGTGGACTGCGTCGAGAGGAAAGGGAAATACATCTACTTCACCGTGGTCATGTCGGAGGGCAAGGAGATCGATTTCAGGTGTCCACAGGACGAGGGCTGGAACGCCGAGATAACTTTGCAGATGGTGCAATACAAAAACAGGCAGGCCATCCTGGCGGTGAAGTCTACCAGACAGAAACAGCAGCTCCTCGTTGTTCAGCTCCCAGGACAGAAAATTATTCGGAGCTCTCCAAACGTTGCGTGACCTGCGCCTCGGACATTCGACGTGCGGTTAATTGGACATTCAGAGGAGGGATCGATGGACTCCTGCTGCATCTGCCCGGCCTCACAAAAGGAGCGTCACACCCCGCAGAAAACATCTCATAATTTAACTGTTGTTTGGTCCCGACAACAGCAGCAGTCTTTTCTCAGTCCTATTTTTCATTAGAGACTCTTTATTTGAGACAGATGGACACTGATGGACAAAGCTTAGGCCTCTGCTACAGCACGAGTGAAAACAGCTGTATTCTAACGGGCGATTCTCTGCCACCCCCTTCTTATTTATTAGATtgtgtatatatgtttttatCTTAACAGTGTCATTGCCTAATGTACAGTGTGGTTGTTGCTGGAGTTGAAACTGAAAGCTGTGCTTGGAGATTCCGTAGGACAGTGTAATGTTTTGTCATGATTGGACATAAGCCTCAGTATCGTTGTGATCCTGGTGGGATGGTTGATTGTGTTACACCTTTAAGGATGTACCAGAgtcccttcctttcccttctaCTATTTCTAGAGGTGTGAGTAGCACATCCTATTGTAAATCTGTGGCCATGATACACATCCTCATTCTTTTATTGAACCAAAGACTTATACGGTATAGTTGCATTTTCCTCCCAAGTGTAGTTGACTGTAAAAATGGCAGGATGCTTCAATGATGAAGGAGATGTTGACAAATCTTTTATTTGTTTGATTTCTCCATAAATCTCACGTTTTGTGATTATCATCGTGCCAGATATTGGCACCCTTTTGCATTACAACTATGGAATATGGTTTGACTTTAGGAAGCAACGTGTGTCAACGCTGCATATTCTTTTGGGAGTCTTAAATCTGTACGGATCAGAAACTGCAGTCCTTTTCAGTGGGAACTGATAGAAAGGTATCCTAGTGAGCAAAACTGGTTGAACATTTCCTTTCAATGGCAAAAGTGTCCAAAAGGACTTATTTTCAACCAGTTTTGCCAAGAGCAAGTCATTAGGCAAATAATTCATCACCATCTTTCCTGAGGAAGCTATGCTGAGACTGACTGTTGAGTTGCCCCCTCACACCACCCCTGGTGTGTCAGGGTTGTCCTCACGTTAACACATGGGTcctttttttaaaaaaaagttactgTTATTCAGTTGGGGTTTTATTTTGATGTGAGAGCTATTTTCATACTTCTGAAATATACATTCCATTTCAAATGAACAGCA

Function

NR:

description
PREDICTED: pleckstrin homology-like domain family A member 1

GO: NA

KEGG:

id description
K23793 PHLDA; pleckstrin homology-like domain family A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036945124.1 True 1869 mRNA 0.46 2 69611623 69614219

Neighbor

gene id symbol gene type direction distance location
LOC110499763 NA coding downstream 1278 69609745 ~ 69610345 (-)
LOC110511775 LOC106609789 coding downstream 85495 69513903 ~ 69526128 (-)
LOC110500968 LOC106609767 coding downstream 98220 69502537 ~ 69513403 (-)
LOC110499783 LOC106609772 coding downstream 180815 69424840 ~ 69430808 (-)
LOC110490621 kcnc2 coding downstream 194558 69333220 ~ 69417065 (-)
LOC110499760 LOC106609764 coding upstream 4749 69618968 ~ 69640830 (-)
LOC118938967 NA coding upstream 10781 69625000 ~ 69625129 (-)
LOC118938965 NA coding upstream 15439 69629658 ~ 69629794 (-)
LOC110500965 osbpl8 coding upstream 63959 69678178 ~ 69829767 (-)
LOC110499751 csrp2 coding upstream 267005 69881224 ~ 69891087 (-)
G1322213 NA non-coding downstream 3525 69607345 ~ 69608098 (-)
G1322212 NA non-coding downstream 6867 69604452 ~ 69604756 (-)
G1322211 NA non-coding downstream 8399 69602957 ~ 69603224 (-)
G1322206 NA non-coding downstream 38367 69572489 ~ 69573256 (-)
G1322201 NA non-coding downstream 46917 69564357 ~ 69564706 (-)
G1322237 NA non-coding upstream 30996 69645215 ~ 69645423 (-)
G1322252 NA non-coding upstream 47080 69661299 ~ 69661523 (-)
G1322267 NA non-coding upstream 94495 69708714 ~ 69710973 (-)
G1322286 NA non-coding upstream 175437 69789656 ~ 69790298 (-)
G1322290 NA non-coding upstream 184070 69798289 ~ 69799504 (-)
G1321997 NA other downstream 48583 69562310 ~ 69563040 (-)
G1321729 NA other downstream 388595 69220303 ~ 69223028 (-)
LOC110490790 LOC106609779 other downstream 454624 69149477 ~ 69163694 (-)
G1321652 nrf1 other downstream 538347 69031026 ~ 69073276 (-)
LOC110513021 exoc4 other downstream 1435241 67998532 ~ 68239937 (-)
G1322348 NA other upstream 284466 69897748 ~ 69899703 (-)
G1323036 NA other upstream 922233 70536452 ~ 70537139 (-)
LOC110490645 LOC106576589 other upstream 929137 70543356 ~ 70547418 (-)
G1323207 NA other upstream 1411032 71025251 ~ 71039522 (-)
G1323296 LOC106609674 other upstream 1588281 71202500 ~ 71237846 (-)

Expression


Co-expression Network