LOC110499754 (LOC106609744)


Basic Information

Item Value
gene id LOC110499754
gene name LOC106609744
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 69905421 ~ 69927631 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036945146.1
ATTGGGCTCCTCACGTTACAACTTTTCGCGCGGTGTCACAGGTAGAATGAGCGCCACCCACTCCTGTCCCATCTGTTTCCCTGAGCCACGCAAGTTAATTAGATGGAACCGCAGTGGGTCCGTAGTCGATACATGCAACAACAACGCCTCTGTCATTAAGGTTATTAATAGGGTTTCTAAGTGCGCGGCTATGCCACTCAAACACCATGAACAGCAGCAGTCAAACTGAACAGCACGAATCTCAGTCAAGACCGCGCGGACTGCCCCGCCAAGAATCTTTAGAGGCGTGGCTGTTGCCCCTTGCCTATTGGATAAATCAATTGTACGCGTCACAACATCTAGATGCTGATTGGCTCGACTGAGTGAAACGCATGAGAGCGCCAGAAAAAAAAGCTTTAGCGGGTGTTTTTGGTTGTAGCTATTCCTGTTCAGTAATGCAATTCCAACACAAGTAACTTCAGCGGAACAGGAGAAGTTTTACAGCTGGATATTAGAAGAAAGCCCGCTTATTTAAGAAATTAAAGTTATGTTGATTTGAGTTAAACAACGTACCACCAGTAAGTCTGTGCAATTGGAGATACTGTACGTTGGTATTGACAACTTTATCTTCTTACGTTACGTAGGAAACGCTGAAGAAGATGGAAGTTGAATGTCTAGCTTTGAGAGATCTCATAAGTCCAAAGAAGAGCAAAGCAGACATGGAGGAAGTTGGAAGCAGAAATGATCAGAAGGAAAACAGATGTGTCGAGCGAAGAAGAACCACCCCTCACAAGATGGACACCACGGCCACCATGCTGCTGTATGGCAGTAAGCCTCCCACCCCGGAACACCTCCAGAGCACCCCTGTTAAGCCTTCTGAGCGGGGGGCCCCTCCCCACGCGGACCCCTGGACCCCCACGGCCAACCTCAGGATGCTCATCAGTGCTGCCAGCCCTGACATCCGCGACAGAGAGATGAAGAAGGTGCTGTTTAGGCCCATTGAGAATGAGAGAGCAGTGGAGGATGTCGAGGTGGATGGCCCGTGCCAGTTTGATGTGgtggacgaggaggaggaagagggggaaaggAAGCCCAGCAGGAAGCAGAAGAGCCTGGGCCTGCTGTGCCAGAAGTTCCTGGCCCTGTATCCGGACTATCCAACCTCTGACACCATCAGTATCTCATTGGATGAGGTGTCTACCAGCCTGGggGTGGAGCGGCGGCGGATCTATGACATCGTAAACGTCCTGGAGTCTCTGATGATCGTGGGGCGCGTGGCTAAGAACCAGTACGTGTGGTACGGGCGGCGGCGCCTGGGGTCCACCCTGGCCGAGCTGCAGAGGATGGGCAGGCGGCAGCGCTACCACCTGCACATGGAGCAGGCCGGGGAGGGTGGTCACAGAGAGGGAGCCACCACACACACCCCAGAGGAGGGAGGTGAAGGAGATTCCAGCTGTGCGGCCGCCAGCACGAGGAAAGACAAGTCCCTACGCATCATGAGTCAGAAGTTTGTCATGCTCTTCCTGGTGTCCAGGACCCAGACGGTCACTCTGGACGTGGCCGCCAAAATCCTCATTGAGGAAAGCCAGGACCCCGCCAGCCACAGCAAGTACAAAACTAAGGTGCGGCGGCTGTATGACATCGCCAACGTCCTGACGAGTCTGGGATTGATCAAGAAGGTCCACGTccgggaggagagggggaggaagccTGCGTTCAAGTGGATCGGCCCGGCAGACTTCCACAGCAGACATGAGGACTCAGAGGCTGTGGCGGCCATCGCTCTTCCGGAGGCCATCGCTCTTCCGGAGGCCATCGCTCTTCCGGAGGCCATCGCTCTTCCGGAGGCCATCGCTCTTCCGGAGGCCATCGCTCTTCCGGGCGGCAGGAAACAGAAGCTGGCACGCCATGCCTCCTTCAATGTGGTGCCCACCTCCGTGGCCAGCCAACGCCGTGTCAACTCGGCGCCCAGCAGCCCACGCAGAGAGGTCACGGGTCTGCTTCCCCAGTCAGTGGACTATTCCAGAAGTTGTGTGAGCAACAGCGCTGTGTGCCGGCTGCAGTTTGGAACCTCTGTTACAGGTGTCTCCCACCCCAGCGGCGGACTTCAGAGCCCCGCCCACAGTGACGGCAACTCCCTGCTCTGCTCCCCGGGCCTAGCCCCCCTGGCCGTGCCCGTCCACCCAGAGGGTTCATACGTGGGACCCCTGTCCCCCCATCCCCACCACATGGCCTATCTACCCAGCCTGTCCCAGGCCTCGGTGGTCATGCTGTACGGAGGTCCGGAGGCGCAGGATGGGCTTGACTGCCTGACCACGGAAGTTCAAAGGTCACCGGGGTCAAGGTCCAGAGAGAACAtcctggagaagaggaagaaggatgaaggagtggaggagaagagggagtcaCCTGAGACAGAGCTATCTGAAAAGagaaggagagtggagggaAGGAGTGTGGAGGGAAACAGCTGTCAGATGACCACCAGCCCAAAGACCAGCTCCCTAGGACACCCAGGGGGGCTAGTCAGGGAAGAGGCCCTATTGAGAGTCCTCAGAGACGGGGAGGTGGGCAGACAGAGCCCCCACAACAACCTGGTCCGGCCTTCACACTACCTCTATGTGCCTAACTCTGCAGgtCTCAACAGTCTCAACTTCCTCCTCTCTGCTGGTCAGACGACAGGCGGCCTGACTCTACCTGCTGGCACCCTGCCCTATGTCCTTGtgtcctcctccaccctctccccctaCCCACTCATGGCCAACCGGGGCGATGCCAATCTCAATTTCAACATGTCCACCATGATGTCCCCCGCCTGCTTCGTGGTGGGATCCGCCGGGCCCTACACAGTGGCCGGAGCCCCGGAGTTCAATGGGGGGGCAGTGGCGCCGGCCCTCTCCAGTCCAGAGCAGCACCCGCTGTTCGGGTCGGCACCCATACCTCCACATTCTCCCTTGGAGACCAGGCCGTCTCTGACCTTCATCCAGACAGAGGCACAGACACCACAGACTCCCAAGGAGGAGGCGGCAGCTGGCGGTGGCTCCAAGGCCTTCTTCCAGACGCCAGGGACCCTGGGAATGGCCACCACAACCCCCGTGGCCCGCCGACGAGGCTCCGCCCAGAGGAGGCTGGACATCAGCCAACCACTGACCAATTAGAAGTCTGGGGACCTTTTAGAGTGGCAGTGGCTGTTAGCTATAACCTGAAAGACTGCCTAGTGGCCTGAGAGGAATGGACAAATGTTGCTCTCCGGCTAAACGTGCTCTGACTGCGCTAGCTTTGGCTTTAGTCCCCACGCTCTGACTCTCAGGGTATCTTTTCTGTATGACCGAACTGTGTTGCTTTCATACCACTGGTGCTTCGCCTTATGAATGAATGCTAGTCTATACGATACCTCCTTTAAGTGCCTCATCATGTAGGGCGAAGTTGCCCCTAGACTCTGATTTTGGGCCAGTTTGCAgtttccccactaatggttaaggttaggattgggggaagggaagctgatcctaggggaaacttcaccctcgAGTTCCTCATGATTGGACTGTGGGACACCGATAACTATCAGAGGACACAGGGAAGCAGTGTTGTCGTCTTTTGTTTTAGTGCCCTCCTGTGGTGGGAGTTAGGTACCACTCATATTTATTTTTCTAGTCCATCTTCCATAGAAAGATTGAGCTACCTTGGTAATCGCTCCACCCATGACTTTATTATATCCCAACGTTATTTATATATTAACTAATATATCTGTTGAGTAACAATTCTGATGATGTTACTCTACTTTTAGCACTAAGTATTTAAGAATATACTTCTGATTGTTGAGTTTCGCTGGCTCTGGAGGGATTCTGTAAAAACGGTATCCGTAGGAAAAGGGAAAACAGTTGATCATAGGTGAATGATATCTGTGGAAGCTGAAAGGTTTCCCATGATGACACATTTCAGAAACTGGTGTTGGTAATAAGTCATGACGTCGAAGAGATATCGATACGCTTCTCGGTTGCACTTCTAGCGTGTAACTGACCTGGCTCTAAGAGAGGTTTAAAAACCACTGGTTTTCACTGTGTAAATTAGGTTTTAACTtaaactccacccaaaaacgaTATTTTGCTAtgtgtttcattagtccattgttgatatagtccaaAATGTTTTGGGTGGAGTTCTCCTTTAAGCTGTCACAGCAACACATTGGTGAGCTTAAGGCCTACAAAATGGCTGCCAGGGTTTTTGGTACAAAGACTGGCATCTTGGCCACTCCAAAGGGTTCTGTATTTGTACAACACTCATGTGGTTTACAGGTTTCCAATTGTTGGGCTTTAAGAATAACACCAAATGCCAGCATCGCTCTCTGTCAATGTGTATGTGCTCACGCCACCACATGCCAGCATCGCTCTCTGTCAATGTGTATGTGCTCACGGCACCACATGCCAGGTGAAAACTAAATGTGAAATGATTTGATGATGTTACAAGATACTTGAATGACTTAGTTATCCAGCGGTGTATACTGGAGACTAGAGTGAAATATCAAAGTACTGTATTTAATGCATTAGAGTTTGGCCTCtggaatattttttgggggggagtaATTGAGGAAAAGTTACATTACACCAAAGGGTGCTGATCATCTACTTGAACTGTAGaatacaggaggttggtggcaccttaactggggaggacgggctcatggtaatgaccGGAGCGGAatctggaatggtatcaaatacatcacacATGGCttacatgtgtttgataccattccatttgctctgttctggccgttatgagccgtcctccagtCAGAGGCCTCCACTGCTGTAGATGTGTTGTTCATGTACAGAaatctctctttttttttaaaccaggaaTTATTTTTGTATATTGTATTCATATGTTTTTAATTATTACTTCAAAACATTGAAATGTTTAATTTAATGCCGCTTCTTATCATAAAATAATAATTACACTGCTAGTTTCTGTAGTTATCCGTCCACTGCTTTGTAGGGAACCTTTtctaacattacaacacattgtTATTTTCACCGTGCTTACTACAGCCTGTATGTATGTTATGGGACAAACAGGGTTTCTCTCTAGACATCCACAACCTTTGTAATAAAAAAGTGAAAA
>XM_036945147.1
TATTGGGCTCCTCACGTTACAACTTTTCGCGCGGTGTCACAGGTAGAATGAGCGCCACCCACTCCTGTCCCATCTGTTTCCCTGAGCCACGCAAGTTAATTAGATGGAACCGCAGTGGGTCCGTAGTCGATACATGCAACAACAACGCCTCTGTCATTAAGGTTATTAATAGGGTTTCTAAGTGCGCGGCTATGCCACTCAAACACCATGAACAGCAGCAGTCAAACTGAACAGCACGAATCTCAGTCAAGACCGCGCGGACTGCCCCGCCAAGAATCTTTAGAGGCGTGGCTGTTGCCCCTTGCCTATTGGATAAATCAATTGTACGCGTCACAACATCTAGATGCTGATTGGCTCGACTGAGTGAAACGCATGAGAGCGCCAGAAAAAAAAGCTTTAGCGGGTGTTTTTGGTTGTAGCTATTCCTGTTCAGTAATGCAATTCCAACACAAGTAACTTCAGCGGAACAGGAGAAGTTTTACAGCTGGATATTAGAAGAAAGCCCGCTTATTTAAGAAATTAAAGTTATGTTGATTTGAGTTAAACAACGTACCACCAGTAAGTCTGTGCAATTGGAGATACTGTACGTTGGTATTGACAACTTTATCTTCTTACGTTACGTAGGAAACGCTGAAGAAGATGGAAGTTGAATGTCTAGCTTTGAGAGATCTCATAAGTCCAAAGAAGAGCAAAGCAGACATGGAGGAAGTTGGAAGCAGAAATGATCAGAAGGAAAACAGATGTGTCGAGCGAAGAAGAACCACCCCTCACAAGATGGACACCACGGCCACCATGCTGCTGTATGGCAGTAAGCCTCCCACCCCGGAACACCTCCAGAGCACCCCTGTTAAGCCTTCTGAGCGGGGGGCCCCTCCCCACGCGGACCCCTGGACCCCCACGGCCAACCTCAGGATGCTCATCAGTGCTGCCAGCCCTGACATCCGCGACAGAGAGATGAAGAAGGTGCTGTTTAGGCCCATTGAGAATGAGAGAGCAGTGGAGGATGTCGAGGTGGATGGCCCGTGCCAGTTTGATGTGgtggacgaggaggaggaagagggggaaaggAAGCCCAGCAGGAAGCAGAAGAGCCTGGGCCTGCTGTGCCAGAAGTTCCTGGCCCTGTATCCGGACTATCCAACCTCTGACACCATCAGTATCTCATTGGATGAGGTGTCTACCAGCCTGGggGTGGAGCGGCGGCGGATCTATGACATCGTAAACGTCCTGGAGTCTCTGATGATCGTGGGGCGCGTGGCTAAGAACCAGTACGTGTGGTACGGGCGGCGGCGCCTGGGGTCCACCCTGGCCGAGCTGCAGAGGATGGGCAGGCGGCAGCGCTACCACCTGCACATGGAGCAGGCCGGGGAGGGTGGTCACAGAGAGGGAGCCACCACACACACCCCAGAGGAGGGAGGTGAAGGAGATTCCAGCTGTGCGGCCGCCAGCACGAGGAAAGACAAGTCCCTACGCATCATGAGTCAGAAGTTTGTCATGCTCTTCCTGGTGTCCAGGACCCAGACGGTCACTCTGGACGTGGCCGCCAAAATCCTCATTGAGGAAAGCCAGGACCCCGCCAGCCACAGCAAGTACAAAACTAAGGTGCGGCGGCTGTATGACATCGCCAACGTCCTGACGAGTCTGGGATTGATCAAGAAGGTCCACGTccgggaggagagggggaggaagccTGCGTTCAAGTGGATCGGCCCGGCAGACTTCCACAGCAGACATGAGGACTCAGAGGCTGTGGCGGCCATCGCTCTTCCGGAGGCCATCGCTCTTCCGGAGGCCATCGCTCTTCCGGAGGCCATCGCTCTTCCGGAGGCCATCGCTCTTCCGGAGGCCATCGCTCTTCCGGGCGGCAGGAAACAGAAGCTGGCACGCCATGCCTCCTTCAATGTGGTGCCCACCTCCGTGGCCAGCCAACGCCGTGTCAACTCGGCGCCCAGCAGCCCACGCAGAGAGGTCACGGGTCTGCTTCCCCAGTCAGTGGACTATTCCAGAAGTTGTGTGAGCAACAGCGCTGTGTGCCGGCTGCAGTTTGGAACCTCTGTTACAGGTGTCTCCCACCCCAGCGGCGGACTTCAGAGCCCCGCCCACAGTGACGGCAACTCCCTGCTCTGCTCCCCGGGCCTAGCCCCCCTGGCCGTGCCCGTCCACCCAGAGGGTTCATACGTGGGACCCCTGTCCCCCCATCCCCACCACATGGCCTATCTACCCAGCCTGTCCCAGGCCTCGGTGGTCATGCTGTACGGAGGTCCGGAGGCGCAGGATGGGCTTGACTGCCTGACCACGGAAGTTCAAAGGTCACCGGGGTCAAGGTCCAGAGAGAACAtcctggagaagaggaagaaggatgaaggagtggaggagaagagggagtcaCCTGAGACAGAGCTATCTGAAAAGggaAGGAGTGTGGAGGGAAACAGCTGTCAGATGACCACCAGCCCAAAGACCAGCTCCCTAGGACACCCAGGGGGGCTAGTCAGGGAAGAGGCCCTATTGAGAGTCCTCAGAGACGGGGAGGTGGGCAGACAGAGCCCCCACAACAACCTGGTCCGGCCTTCACACTACCTCTATGTGCCTAACTCTGCAGgtCTCAACAGTCTCAACTTCCTCCTCTCTGCTGGTCAGACGACAGGCGGCCTGACTCTACCTGCTGGCACCCTGCCCTATGTCCTTGtgtcctcctccaccctctccccctaCCCACTCATGGCCAACCGGGGCGATGCCAATCTCAATTTCAACATGTCCACCATGATGTCCCCCGCCTGCTTCGTGGTGGGATCCGCCGGGCCCTACACAGTGGCCGGAGCCCCGGAGTTCAATGGGGGGGCAGTGGCGCCGGCCCTCTCCAGTCCAGAGCAGCACCCGCTGTTCGGGTCGGCACCCATACCTCCACATTCTCCCTTGGAGACCAGGCCGTCTCTGACCTTCATCCAGACAGAGGCACAGACACCACAGACTCCCAAGGAGGAGGCGGCAGCTGGCGGTGGCTCCAAGGCCTTCTTCCAGACGCCAGGGACCCTGGGAATGGCCACCACAACCCCCGTGGCCCGCCGACGAGGCTCCGCCCAGAGGAGGCTGGACATCAGCCAACCACTGACCAATTAGAAGTCTGGGGACCTTTTAGAGTGGCAGTGGCTGTTAGCTATAACCTGAAAGACTGCCTAGTGGCCTGAGAGGAATGGACAAATGTTGCTCTCCGGCTAAACGTGCTCTGACTGCGCTAGCTTTGGCTTTAGTCCCCACGCTCTGACTCTCAGGGTATCTTTTCTGTATGACCGAACTGTGTTGCTTTCATACCACTGGTGCTTCGCCTTATGAATGAATGCTAGTCTATACGATACCTCCTTTAAGTGCCTCATCATGTAGGGCGAAGTTGCCCCTAGACTCTGATTTTGGGCCAGTTTGCAgtttccccactaatggttaaggttaggattgggggaagggaagctgatcctaggggaaacttcaccctcgAGTTCCTCATGATTGGACTGTGGGACACCGATAACTATCAGAGGACACAGGGAAGCAGTGTTGTCGTCTTTTGTTTTAGTGCCCTCCTGTGGTGGGAGTTAGGTACCACTCATATTTATTTTTCTAGTCCATCTTCCATAGAAAGATTGAGCTACCTTGGTAATCGCTCCACCCATGACTTTATTATATCCCAACGTTATTTATATATTAACTAATATATCTGTTGAGTAACAATTCTGATGATGTTACTCTACTTTTAGCACTAAGTATTTAAGAATATACTTCTGATTGTTGAGTTTCGCTGGCTCTGGAGGGATTCTGTAAAAACGGTATCCGTAGGAAAAGGGAAAACAGTTGATCATAGGTGAATGATATCTGTGGAAGCTGAAAGGTTTCCCATGATGACACATTTCAGAAACTGGTGTTGGTAATAAGTCATGACGTCGAAGAGATATCGATACGCTTCTCGGTTGCACTTCTAGCGTGTAACTGACCTGGCTCTAAGAGAGGTTTAAAAACCACTGGTTTTCACTGTGTAAATTAGGTTTTAACTtaaactccacccaaaaacgaTATTTTGCTAtgtgtttcattagtccattgttgatatagtccaaAATGTTTTGGGTGGAGTTCTCCTTTAAGCTGTCACAGCAACACATTGGTGAGCTTAAGGCCTACAAAATGGCTGCCAGGGTTTTTGGTACAAAGACTGGCATCTTGGCCACTCCAAAGGGTTCTGTATTTGTACAACACTCATGTGGTTTACAGGTTTCCAATTGTTGGGCTTTAAGAATAACACCAAATGCCAGCATCGCTCTCTGTCAATGTGTATGTGCTCACGCCACCACATGCCAGCATCGCTCTCTGTCAATGTGTATGTGCTCACGGCACCACATGCCAGGTGAAAACTAAATGTGAAATGATTTGATGATGTTACAAGATACTTGAATGACTTAGTTATCCAGCGGTGTATACTGGAGACTAGAGTGAAATATCAAAGTACTGTATTTAATGCATTAGAGTTTGGCCTCtggaatattttttgggggggagtaATTGAGGAAAAGTTACATTACACCAAAGGGTGCTGATCATCTACTTGAACTGTAGaatacaggaggttggtggcaccttaactggggaggacgggctcatggtaatgaccGGAGCGGAatctggaatggtatcaaatacatcacacATGGCttacatgtgtttgataccattccatttgctctgttctggccgttatgagccgtcctccagtCAGAGGCCTCCACTGCTGTAGATGTGTTGTTCATGTACAGAaatctctctttttttttaaaccaggaaTTATTTTTGTATATTGTATTCATATGTTTTTAATTATTACTTCAAAACATTGAAATGTTTAATTTAATGCCGCTTCTTATCATAAAATAATAATTACACTGCTAGTTTCTGTAGTTATCCGTCCACTGCTTTGTAGGGAACCTTTtctaacattacaacacattgtTATTTTCACCGTGCTTACTACAGCCTGTATGTATGTTATGGGACAAACAGGGTTTCTCTCTAGACATCCACAACCTTTGTAATAAAAAAGTGAAAA

Function

NR:

description
transcription factor E2F7-like

GO: NA

KEGG:

id description
K09391 E2F7_8; transcription factor E2F7/8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036945146.1 False 5109 mRNA 0.51 13 69905421 69927630
XM_036945147.1 True 5095 mRNA 0.51 13 69905421 69927631

Neighbor

gene id symbol gene type direction distance location
LOC110499751 csrp2 coding downstream 14334 69881224 ~ 69891087 (-)
LOC110500965 osbpl8 coding downstream 75654 69678178 ~ 69829767 (-)
LOC110499760 LOC106609764 coding downstream 264591 69618968 ~ 69640830 (-)
LOC118938965 NA coding downstream 275627 69629658 ~ 69629794 (-)
LOC118938967 NA coding downstream 280292 69625000 ~ 69625129 (-)
LOC110490659 NA coding upstream 465630 70393261 ~ 70394050 (-)
LOC110490652 ctrb coding upstream 468100 70395731 ~ 70397315 (-)
LOC110490645 LOC106576589 coding upstream 615745 70543356 ~ 70547418 (-)
si:dkey-14k9.3 LOC106609712 coding upstream 622957 70550588 ~ 70558751 (-)
LOC110515225 LOC106609712 coding upstream 631365 70558996 ~ 70566048 (-)
G1322348 NA non-coding downstream 5718 69897748 ~ 69899703 (-)
G1322338 NA non-coding downstream 24332 69880641 ~ 69881089 (-)
G1322340 NA non-coding downstream 24863 69879515 ~ 69880558 (-)
G1322334 NA non-coding downstream 29529 69872028 ~ 69875892 (-)
G1322292 NA non-coding downstream 100326 69804491 ~ 69805095 (-)
G1322337 LOC106598243 non-coding upstream 18010 69945641 ~ 69990817 (-)
G1322341 LOC106576605 non-coding upstream 49075 69976706 ~ 70001692 (-)
G1322380 NA non-coding upstream 74877 70002508 ~ 70002730 (-)
G1322381 NA non-coding upstream 76083 70003714 ~ 70003946 (-)
G1322403 NA non-coding upstream 99593 70027224 ~ 70027596 (-)
G1321997 NA other downstream 342381 69562310 ~ 69563040 (-)
G1321729 NA other downstream 682393 69220303 ~ 69223028 (-)
LOC110490790 LOC106609779 other downstream 748422 69149477 ~ 69163694 (-)
G1321652 nrf1 other downstream 832145 69031026 ~ 69073276 (-)
G1323036 NA other upstream 608821 70536452 ~ 70537139 (-)
G1323207 NA other upstream 1097620 71025251 ~ 71039522 (-)
G1323296 LOC106609674 other upstream 1274869 71202500 ~ 71237846 (-)
LOC118938840 LOC106576579 other upstream 1929652 71841725 ~ 71923263 (-)

Expression


Co-expression Network