LOC110490659


Basic Information

Item Value
gene id LOC110490659
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 70393261 ~ 70394050 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110490659
ATGGCTTTTCTCTGGTTCGTCTCCTGTCTCGCGTTTGTAAGCGCCGCCTACGTCTGCGGGACCCCCACATTCTTTCCCGTGGCTATGGCCGCGTCATCAATAGTGAGGAGGCTGTGCCCCACTCCTGGCAGCAATCTGGCACCCACTTATGTGGAGTTTCCCTGACAAACGAGTACTAGGTGGTGACTGCTGCTCACTGCGATGTCAAGACCTCCCACCGGCGAGCACGACATGCTCATGAGCAATGAGGCCATCCAGATCCTGAAGCCTGCTAAAGTGTTCACCCACTCCAGGTGGAACCCCAGTACCATCAAAAATGACATCCTCTTGATCAAGCTGGCCACCCCCACCACCCTGAGCGCCAAAGTGTCCCCTGTGTGTCTGGCTTCGTATGAAGACAACTTCGCCCCTGGCATGACCTGTGTGACTTCCGGCTGGTGCATGAGCAGCTACCAGCTTGCCAATTACCCCAACAAAACTGCAGCAGGGTGCTGTGCCCCTCCTGTCTGAGGAGGAGTGCAAGAAGCACTGAGGAAACATGATTCATGAAATGATCTGTGCTGGTGGTAAAGGTGTTTCCTCCTGCATGGTGGCCTCCTGGTCTGTGAGAAGAACAAGGTGTGGAGCCTGGTCGGTATTGTGTTCTGGGGCAGCAGTGGTTGctctacctctaccccctctGTGTACACCGGAGTCGCCGAGGTTCGCACCTGGGTGGGCATGACCATGATGCTCAACTAAGAGCAATGCCACAGTTTCCCTGTCCAGAAAAATATGTACTGCTACACCA

Function

NR:

description
PREDICTED: chymotrypsin B-like

GO:

id name namespace
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110490659 True 790 mRNA 0.55 1 70393261 70394050

Neighbor

gene id symbol gene type direction distance location
LOC110499754 LOC106609744 coding downstream 465630 69905421 ~ 69927631 (-)
LOC110499751 csrp2 coding downstream 502174 69881224 ~ 69891087 (-)
LOC110500965 osbpl8 coding downstream 563494 69678178 ~ 69829767 (-)
LOC110499760 LOC106609764 coding downstream 752431 69618968 ~ 69640830 (-)
LOC110490652 ctrb coding upstream 1681 70395731 ~ 70397315 (-)
LOC110490645 LOC106576589 coding upstream 149326 70543356 ~ 70547418 (-)
si:dkey-14k9.3 LOC106609712 coding upstream 156538 70550588 ~ 70558751 (-)
LOC110515225 LOC106609712 coding upstream 164946 70558996 ~ 70566048 (-)
LOC110490632 LOC106576583 coding upstream 171638 70565688 ~ 70571698 (-)
G1322914 NA non-coding downstream 96443 70241711 ~ 70296818 (-)
G1322918 NA non-coding downstream 131732 70260906 ~ 70261529 (-)
G1322902 NA non-coding downstream 183872 70209166 ~ 70209389 (-)
G1322899 NA non-coding downstream 191706 70201312 ~ 70201555 (-)
G1322898 NA non-coding downstream 194814 70197964 ~ 70198447 (-)
G1322968 NA non-coding upstream 41049 70435099 ~ 70435353 (-)
G1322971 NA non-coding upstream 46029 70440079 ~ 70440399 (-)
G1322973 NA non-coding upstream 49691 70443741 ~ 70443942 (-)
G1322992 LOC106609740 non-coding upstream 84768 70478818 ~ 70479238 (-)
G1322996 NA non-coding upstream 87649 70481699 ~ 70483098 (-)
G1322348 NA other downstream 493558 69897748 ~ 69899703 (-)
G1321997 NA other downstream 830221 69562310 ~ 69563040 (-)
G1321729 NA other downstream 1170233 69220303 ~ 69223028 (-)
LOC110490790 LOC106609779 other downstream 1236262 69149477 ~ 69163694 (-)
G1321652 nrf1 other downstream 1319985 69031026 ~ 69073276 (-)
G1323036 NA other upstream 142402 70536452 ~ 70537139 (-)
G1323207 NA other upstream 631201 71025251 ~ 71039522 (-)
G1323296 LOC106609674 other upstream 808450 71202500 ~ 71237846 (-)
LOC118938840 LOC106576579 other upstream 1463233 71841725 ~ 71923263 (-)

Expression


Co-expression Network