LOC110490652 (ctrb)


Basic Information

Item Value
gene id LOC110490652
gene name ctrb
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 70395731 ~ 70397315 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021564126.2
ATAGACAGGTGGGGTTTGGGAATAAATAGGGTCCCCGGTCCACTAGACTGTCACATTCTCACAATGGCTTTCCTCTGGTTCGTGTCCTGTCTCGCCTTCATCAGCGCCGCCTACGGCTGCGGCATCCCCGCCATCAAGCCCGAGGTGTCTGGCTATGCCCGCATCGTTAATGGTGAGGAGGCTGTGCCCCACTCCTGGCCCTGGCAGGTATCTCTGCAGCAGACCAGCGGCTTCCACTTCTGTGGGGGATCCCTGATCAACGAGAACTGGGTGGTCACCGCCGCTCACTGCAACGTCGCTACCTACCACCGCGTGATCGTTGGAGAGCACAAGAGGGGCAGCGGCAACAATGCTGAGGACATCCAGATCCTGAAGCCCGCTAAGGTGTTCACCCACCCCAAGTGGAACCCCAGTACCATCAACAACGATATCTCCCTGATCAAGCTGTCCACCCCTGCTGTCCTGAACACCAATGTGTCCCCGGTGTGCCTGGCTGAGACCGCCGACGTCTTTGCACCTGGCATGACCTGTGTGACCTCCGGCTGGGGTCTGCTGCGCTACAATGCTATCAACACCCCTAACGAGCTGCAGCAGGCTGCTCTGCCCCTGCTGTCCAACGAGCAGTGCAAGCAGCACTGGGGGAGCAGCATCTCCGATGTCATGATCTGTGCCGGTGGTGCTGGTGCTACCTCCTGCATGGGTGACTCCGGTGGCCCCCTGGTCTGTGAGAAGGACAACGTCTGGACCCTGGTCGGTATTGTGTCCTGGGGCAGCAGCCGTTGCTCCACCACTACTCCCGCTGTGTACGCCCGCGTCACCGAGCTCCGTTCCTGGGTGGACCAGACCCTGGCCGCCAACTAAGAGCCATGCTGCAGCGTCCCTGTCCATCCTGTATATTGCTATGTAATTTTATGCATTGTTATGTCATACTATGTTTTGCTATGTCATTCTATATATTACTATGTAATGTACAACAACTAAACATTAGCTACCAAGACTGAGAGTGCCACCCATTGGTCTGAACTGAACATGACATTCAATAAACATACTTGAACATAAAAAATA

Function

symbol description
ctrb chymotrypsin

NR:

description
chymotrypsin B-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K01310 CTRB; chymotrypsin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021564126.2 True 1065 mRNA 0.56 3 70395731 70397315

Neighbor

gene id symbol gene type direction distance location
LOC110490659 NA coding downstream 1681 70393261 ~ 70394050 (-)
LOC110499754 LOC106609744 coding downstream 468100 69905421 ~ 69927631 (-)
LOC110499751 csrp2 coding downstream 504644 69881224 ~ 69891087 (-)
LOC110500965 osbpl8 coding downstream 565964 69678178 ~ 69829767 (-)
LOC118938965 NA coding downstream 765937 69629658 ~ 69629794 (-)
LOC110490645 LOC106576589 coding upstream 146061 70543356 ~ 70547418 (-)
si:dkey-14k9.3 LOC106609712 coding upstream 153273 70550588 ~ 70558751 (-)
LOC110515225 LOC106609712 coding upstream 161681 70558996 ~ 70566048 (-)
LOC110490632 LOC106576583 coding upstream 168373 70565688 ~ 70571698 (-)
LOC110490800 LOC106609708 coding upstream 176788 70574103 ~ 70588541 (-)
G1322914 NA non-coding downstream 98913 70241711 ~ 70296818 (-)
G1322918 NA non-coding downstream 134202 70260906 ~ 70261529 (-)
G1322902 NA non-coding downstream 186342 70209166 ~ 70209389 (-)
G1322899 NA non-coding downstream 194176 70201312 ~ 70201555 (-)
G1322898 NA non-coding downstream 197284 70197964 ~ 70198447 (-)
G1322968 NA non-coding upstream 37784 70435099 ~ 70435353 (-)
G1322971 NA non-coding upstream 42764 70440079 ~ 70440399 (-)
G1322973 NA non-coding upstream 46426 70443741 ~ 70443942 (-)
G1322992 LOC106609740 non-coding upstream 81503 70478818 ~ 70479238 (-)
G1322996 NA non-coding upstream 84384 70481699 ~ 70483098 (-)
G1322348 NA other downstream 496028 69897748 ~ 69899703 (-)
G1321997 NA other downstream 832691 69562310 ~ 69563040 (-)
G1321729 NA other downstream 1172703 69220303 ~ 69223028 (-)
LOC110490790 LOC106609779 other downstream 1238732 69149477 ~ 69163694 (-)
G1321652 nrf1 other downstream 1322455 69031026 ~ 69073276 (-)
G1323036 NA other upstream 139137 70536452 ~ 70537139 (-)
G1323207 NA other upstream 627936 71025251 ~ 71039522 (-)
G1323296 LOC106609674 other upstream 805185 71202500 ~ 71237846 (-)
LOC118938840 LOC106576579 other upstream 1459968 71841725 ~ 71923263 (-)

Expression


Co-expression Network