LOC110490633 (LOC106576584)


Basic Information

Item Value
gene id LOC110490633
gene name LOC106576584
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 70593116 ~ 70606149 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036945167.1
CTATCTGAGTTTAattttgaaaaacaagaaaacccGGAAACTGATTAAAACAACTTCCGTTTCTCACTGCCTGAATGGTATGTGGAGAGAACGGCAACTCTAGACCGGGAAGTGGGGCATCTAAAtcaaatctagctagctaacttttttCAAGTATACCTTAGCTTCCTGTTGACTATTGTATGAGGCCGAGATGCAAAGTCAGGATCCATGCGAAAATTgtccccctcttcttcttccctctctgcGTCTTTTCATTCCACCACTGCGGCTTGTCTCTGCAGCCATGTGGCAAGTGGTTCAACGAGGAGACGTTCAAGATTATGGGATGCTGGAGGAGTTTGTCACCATGGTTACAGAGATTGTGCCAGAGCTTTTGAGTTGCAGTCAGAGGGCCCAACTCATTCTGGGGCTTCGAGCAAGGCTGGTTCTGGAGTTGTGTCGCACTGAGCAGACATTAGACCTCATGAATATTCAAAAACACCTGGACAGGATCCGATCCCTCACATCCACTGAGGAAGCAGAGGTGGAATTATCTGAATCAAAGTTTGTGGAGCTGGTTAAATCTCTGCTGAAAGACCCAAGTGAAAGGGAGAACTTCTACCAGAACGTGTTCCCTGTGGAATTTGGGCCCAAGTATGACACTGCAATACAGATGCTGATGTTAGAATTCCTTTCCAGACTTGAGAAGTTACTTCCCATACCAGACCTTGAACAGAAATGTGTGCAGTTTGTACCTGACCCCATACAATTGAGGACCCTGCTCCAGTACCACAGAAAACTTGGACATTTGGACTCCATCCGAACTCCATCATCCTTTGGTgacttcatcctctcctctctgtctcttcctccataCGTGCGAGTGGTGACTGCCCCACATGTAGACTCAGATACACAATCAGAAAGCATGAATTTGGAGGGAATGAAAGCAAGAGAGTTGTTGGAGAATCGGACAAAGGAAATCGATGTACTAGTCCCAGCAGATGAAGTTAGAAGATACATAATTACTGAGCCAGATTACGGTATGGACATGGAGTCTGCCGTTGGGGAAAATGACAATCAAGCTGTCACTGGCTTGAATTTACTCAGACCATCACAATTAAAACGAAGCAAAAGGCTGCAGATTAAGAACATGTTTCCAAAACGACGGAAACCTCGAAAGACCGATTCTTCCGGGCGTGCAAACAAACAGCCATCATCCTCCAAGGGTCGGCCTTCCCCAAAGAAGTCATGCAAAAAAGGCCCATTCAGTAAGACATGTGAAGTGTGTGGGAAGACATTCACTCGAGTCACAGCCATGAAAAGGCATCAGCTAACCCACACTGGAGATCTCAAGTTTAAGTGCCTCATGTGTGAAAAAAGCTTCAGGGATGGTCATAATCTGAAGAGACACCAGAGGCGAGTTTGTGAAAAGGAGATAAACATGTTGGATGAAGATGAAAATGAGGAAGAGATCCCACAACCCTCAACTAGCAAATCTCAGATCCCATCACTCCTCAAGACTCCCTGTCCACCAGGGCCATCTCATCAAGGAACTCTGGACACTATCACAGCCACTAACACATGCTCTGTGTGTGGGCGGTATTTTGCTCGTACTTCCAGCTTGGTAAGGCACATGAGCTCCCACTCAAAAGAGCGTCCATTTGGGTGTGTCAATTGTGATAAGAGATTCAAGTATTCGTACGATTTGAAAAAACACCAGAGAGAATTGTGTCAGAAAATGACCCAGGGAGATTTGTGTCAGGATGTTGGTCAGAACATGGCACAACAAAAGAGTGGCCTGGAACCAGAGAAGGTCTTTCTTGCCACTGCAGAGAATCAAACCCAGGTAGATTCCAAAACCTGTTATGTCTGTGGTAAGATTTTGACTTGTACCTCACAGATGGAAAGGCACTTGAAATCTCACTCAAAGGCACGTCCCTTTAATTGTGCTATTTGTGAGAGAAGTTTTAAGTACAAAGATACCTTGAAGAAACATCAGGAAATCCTTGGCCACGAGGGCATCCTAGAAGACTTGGGTCAGAGTGTGAACCAGCAAGAAGTGGAAGTTAACACAGAGAGTTGCATCAGCCCTCTCACTACCAAGGAAAACGACACTGAGCCCCTTATCACGGCTGCTACTTCAGTGCCGACTCTCAAAGAACCCAAACCATGCACTGTGTGTGGGAAGATTTTTAACCGTGCTTCAGTTATGGCTATTCATATGAGATCCCATTCAGATGAGCGTCCTTATCAATGTGGCAATTGTGAACAGCGCTTCAAGTACATGCACAATCTGAATCAACACCAGAGATATATCTGTAAGGTGAACCGAGAAGAGTCCTCTCAGATGGTAGACCAGCACCAAGAGGAGGAGTCTTGTGAACTGGTGGCTGTTAAGGCTGATACCCCAGAGACATCTACCAGTCGACTACAACTGGTTCACTGGTGTAAaaaatgtggaaagtgtttcgaTGACATCTGTAATTTGAAGCAACACCAGGAAAGTTCATGCAAAGAGGAAAAAATAAAGGTGGTCTTCCAATGTGAAAAAAGAAAGGTGGTCTTCAAATGTGATGATTGTGGGAAGGACTTCAAAGGTTCATCATCCCTAAGGACACACAAGCGAATTCACAACCCATTCTATTGCTCTGATTGTGGAAGGGTCCTCCCAAACTCCATTGCCTTTGACAGACACAAGCTGATGCAGCACAAGGAAATCCAGTGTACCATGTGTGAGAAGACCTTTACCCTGTTGGGGCGTCTGAGAGATCACTATCTGCATCAACATAAATTCACAGGACCATACCCCTGCTCTCAATGTGAGAAAACTTTTACCCAGTTAAGATACCTTGTTGAACATGAGAGGGTTCATTCAGGAGAGTACCCTTACCAGTGCTCTGTTTGTCAAGCAAAGTTCAATAAAGCAAATTCTCTAACAATACACAGTAGGAagcacacaggagaaaagccgtTCCTGTGCTGGCAATGTGGAAAGAGTTACAAGGATCGTGGAAACCTGTCAATGCATATGGGGACCCACTCAGAGGAGAGACCATTTTCTTGTTCGCAGTGTGACATGACTTATCGGACAAAGATTCAGCTGAATACACACATTGAACAAGTTCATGAGGGGGTGAGATACACCTGTGCAGTCTGTGGAAAGCAGTTTTTGAAAGCTGTGTCATTGATAAGACATGAACTCACTCACACAGGAGAAAGACCATGGCCATGCTCCTATTGCACAAAAACCTTCATCACTGCCAATGAAAGGAGATTGCATGAAAGATACCATACTGGTGAGAGACCATACAAATGCCAAGACTGTGGAAAGTCCTTCGTACAGTTATGTTTTCTGAAAGCACACCAACGacttcacacaggagagaagccatttGCATGCAGTGTTTGTGACAAACGTTTCAGATTAAATTACCATAGGCAAAGACACGAGCAAACCCATACAGGAAAACAGAAGCCACATGTTTGTGCGGAATGTGGGTTAGCTTTTGCTCAAAGAAAGCGCCTGACTGAACACCAATGCACTCACTCCTTGAattaattattatattttttttaagtctaATGTTCCTTTGCATTGTTATTCATTTTAAGACAGTACAGTGGGGAAAGTAGTGAGGGAGACAAATTAGGGGCACAGACAGAAAGAAGGGCAGAGAAGGGTCTTTTGAACCCTCGTCACCAAGTACCACTCTGTTAGACTCAGGCATTTGAGTTCTTGTTGTGtactaaaaataaaaacacaggtTTACACCTCAGGTTTGAATTAATATTCTATTTTTCAGCTTTGTTTCATAATTCTGTGGATAATTTCCATTGCTAATTTGTAGTATGTATAGTAAAGGAGAACGTGTAAACTGTTATTCTCAAATAACCACAACATTGCATTTTGTGATCATGGCAATAATAAAGGAGGACATGAAAATA
>XM_036945166.1
CCTATCTGAGTTTAattttgaaaaacaagaaaacccGGAAACTGATTAAAACAACTTCCGTTTCTCACTGCCTGAATGGTATGTGGAGAGAACGGCAACTCTAGACCGGGAAGTGGGGCATCTAAAtcaaatctagctagctaacttttttCAAGTATACCTTAGCTTCCTGTTGACTATTGTATGAGGCCGAGATGCAAAGTCAGGATCCATGCGAAAATTgtccccctcttcttcttccctctctgcGTCTTTTCATTCCACCACTGCGGCTTGTCTCTGCAGCCATGTGGCAAGTGGTTCAACGAGGAGACGTTCAAGATTATGGGATGCTGGAGGAGTTTGTCACCATGGTTACAGAGATTGTGCCAGAGCTTTTGAGTTGCAGTCAGAGGGCCCAACTCATTCTGGGGCTTCGAGCAAGGCTGGTTCTGGAGTTGTGTCGCACTGAGCAGACATTAGACCTCATGAATATTCAAAAACACCTGGACAGGATCCGATCCCTCACATCCACTGAGGAAGCAGAGGTGGAATTATCTGAATCAAAGTTTGTGGAGCTGGTTAAATCTCTGCTGAAAGACCCAAGTGAAAGGGAGAACTTCTACCAGAACGTGTTCCCTGTGGAATTTGGGCCCAAGTATGACACTGCAATACAGATGCTGATGTTAGAATTCCTTTCCAGACTTGAGAAGTTACTTCCCATACCAGACCTTGAACAGACTGCTACCTTGTTAAGTGCTGTCCCCTCTGCCCTGGAGAAATGTGTGCAGTTTGTACCTGACCCCATACAATTGAGGACCCTGCTCCAGTACCACAGAAAACTTGGACATTTGGACTCCATCCGAACTCCATCATCCTTTGGTgacttcatcctctcctctctgtctcttcctccataCGTGCGAGTGGTGACTGCCCCACATGTAGACTCAGATACACAATCAGAAAGCATGAATTTGGAGGGAATGAAAGCAAGAGAGTTGTTGGAGAATCGGACAAAGGAAATCGATGTACTAGTCCCAGCAGATGAAGTTAGAAGATACATAATTACTGAGCCAGATTACGGTATGGACATGGAGTCTGCCGTTGGGGAAAATGACAATCAAGCTGTCACTGGCTTGAATTTACTCAGACCATCACAATTAAAACGAAGCAAAAGGCTGCAGATTAAGAACATGTTTCCAAAACGACGGAAACCTCGAAAGACCGATTCTTCCGGGCGTGCAAACAAACAGCCATCATCCTCCAAGGGTCGGCCTTCCCCAAAGAAGTCATGCAAAAAAGGCCCATTCAGTAAGACATGTGAAGTGTGTGGGAAGACATTCACTCGAGTCACAGCCATGAAAAGGCATCAGCTAACCCACACTGGAGATCTCAAGTTTAAGTGCCTCATGTGTGAAAAAAGCTTCAGGGATGGTCATAATCTGAAGAGACACCAGAGGCGAGTTTGTGAAAAGGAGATAAACATGTTGGATGAAGATGAAAATGAGGAAGAGATCCCACAACCCTCAACTAGCAAATCTCAGATCCCATCACTCCTCAAGACTCCCTGTCCACCAGGGCCATCTCATCAAGGAACTCTGGACACTATCACAGCCACTAACACATGCTCTGTGTGTGGGCGGTATTTTGCTCGTACTTCCAGCTTGGTAAGGCACATGAGCTCCCACTCAAAAGAGCGTCCATTTGGGTGTGTCAATTGTGATAAGAGATTCAAGTATTCGTACGATTTGAAAAAACACCAGAGAGAATTGTGTCAGAAAATGACCCAGGGAGATTTGTGTCAGGATGTTGGTCAGAACATGGCACAACAAAAGAGTGGCCTGGAACCAGAGAAGGTCTTTCTTGCCACTGCAGAGAATCAAACCCAGGTAGATTCCAAAACCTGTTATGTCTGTGGTAAGATTTTGACTTGTACCTCACAGATGGAAAGGCACTTGAAATCTCACTCAAAGGCACGTCCCTTTAATTGTGCTATTTGTGAGAGAAGTTTTAAGTACAAAGATACCTTGAAGAAACATCAGGAAATCCTTGGCCACGAGGGCATCCTAGAAGACTTGGGTCAGAGTGTGAACCAGCAAGAAGTGGAAGTTAACACAGAGAGTTGCATCAGCCCTCTCACTACCAAGGAAAACGACACTGAGCCCCTTATCACGGCTGCTACTTCAGTGCCGACTCTCAAAGAACCCAAACCATGCACTGTGTGTGGGAAGATTTTTAACCGTGCTTCAGTTATGGCTATTCATATGAGATCCCATTCAGATGAGCGTCCTTATCAATGTGGCAATTGTGAACAGCGCTTCAAGTACATGCACAATCTGAATCAACACCAGAGATATATCTGTAAGGTGAACCGAGAAGAGTCCTCTCAGATGGTAGACCAGCACCAAGAGGAGGAGTCTTGTGAACTGGTGGCTGTTAAGGCTGATACCCCAGAGACATCTACCAGTCGACTACAACTGGTTCACTGGTGTAAaaaatgtggaaagtgtttcgaTGACATCTGTAATTTGAAGCAACACCAGGAAAGTTCATGCAAAGAGGAAAAAATAAAGGTGGTCTTCCAATGTGAAAAAAGAAAGGTGGTCTTCAAATGTGATGATTGTGGGAAGGACTTCAAAGGTTCATCATCCCTAAGGACACACAAGCGAATTCACAACCCATTCTATTGCTCTGATTGTGGAAGGGTCCTCCCAAACTCCATTGCCTTTGACAGACACAAGCTGATGCAGCACAAGGAAATCCAGTGTACCATGTGTGAGAAGACCTTTACCCTGTTGGGGCGTCTGAGAGATCACTATCTGCATCAACATAAATTCACAGGACCATACCCCTGCTCTCAATGTGAGAAAACTTTTACCCAGTTAAGATACCTTGTTGAACATGAGAGGGTTCATTCAGGAGAGTACCCTTACCAGTGCTCTGTTTGTCAAGCAAAGTTCAATAAAGCAAATTCTCTAACAATACACAGTAGGAagcacacaggagaaaagccgtTCCTGTGCTGGCAATGTGGAAAGAGTTACAAGGATCGTGGAAACCTGTCAATGCATATGGGGACCCACTCAGAGGAGAGACCATTTTCTTGTTCGCAGTGTGACATGACTTATCGGACAAAGATTCAGCTGAATACACACATTGAACAAGTTCATGAGGGGGTGAGATACACCTGTGCAGTCTGTGGAAAGCAGTTTTTGAAAGCTGTGTCATTGATAAGACATGAACTCACTCACACAGGAGAAAGACCATGGCCATGCTCCTATTGCACAAAAACCTTCATCACTGCCAATGAAAGGAGATTGCATGAAAGATACCATACTGGTGAGAGACCATACAAATGCCAAGACTGTGGAAAGTCCTTCGTACAGTTATGTTTTCTGAAAGCACACCAACGacttcacacaggagagaagccatttGCATGCAGTGTTTGTGACAAACGTTTCAGATTAAATTACCATAGGCAAAGACACGAGCAAACCCATACAGGAAAACAGAAGCCACATGTTTGTGCGGAATGTGGGTTAGCTTTTGCTCAAAGAAAGCGCCTGACTGAACACCAATGCACTCACTCCTTGAattaattattatattttttttaagtctaATGTTCCTTTGCATTGTTATTCATTTTAAGACAGTACAGTGGGGAAAGTAGTGAGGGAGACAAATTAGGGGCACAGACAGAAAGAAGGGCAGAGAAGGGTCTTTTGAACCCTCGTCACCAAGTACCACTCTGTTAGACTCAGGCATTTGAGTTCTTGTTGTGtactaaaaataaaaacacaggtTTACACCTCAGGTTTGAATTAATATTCTATTTTTCAGCTTTGTTTCATAATTCTGTGGATAATTTCCATTGCTAATTTGTAGTATGTATAGTAAAGGAGAACGTGTAAACTGTTATTCTCAAATAACCACAACATTGCATTTTGTGATCATGGCAATAATAAAGGAGGACATGAAAATA

Function

NR:

description
PREDICTED: zinc finger protein 624-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036945167.1 False 3930 mRNA 0.44 7 70593116 70606148
XM_036945166.1 True 3970 mRNA 0.44 7 70593116 70606149

Neighbor

gene id symbol gene type direction distance location
LOC110490634 LOC106609716 coding downstream 439 70583258 ~ 70592677 (-)
LOC110490800 LOC106609708 coding downstream 4575 70574103 ~ 70588541 (-)
LOC110490632 LOC106576583 coding downstream 21418 70565688 ~ 70571698 (-)
LOC110515225 LOC106609712 coding downstream 27068 70558996 ~ 70566048 (-)
si:dkey-14k9.3 LOC106609712 coding downstream 34365 70550588 ~ 70558751 (-)
LOC118938838 LOC106576602 coding upstream 38015 70644164 ~ 70649036 (-)
LOC118936248 cmas coding upstream 127213 70733362 ~ 70755356 (-)
LOC110490643 LOC106596479 coding upstream 156828 70762977 ~ 70776821 (-)
LOC118938960 NA coding upstream 171140 70776831 ~ 70848012 (-)
LOC110490694 LOC106576596 coding upstream 175546 70781695 ~ 70787736 (-)
G1323042 NA non-coding downstream 10040 70582174 ~ 70583076 (-)
G1323032 NA non-coding downstream 61233 70531587 ~ 70531883 (-)
G1323010 NA non-coding downstream 91184 70499151 ~ 70501932 (-)
G1323005 NA non-coding downstream 101375 70491511 ~ 70491741 (-)
G1323000 NA non-coding downstream 106323 70486285 ~ 70486793 (-)
G1323063 LOC106576594 non-coding upstream 45909 70652058 ~ 70691752 (-)
G1323082 NA non-coding upstream 91796 70697945 ~ 70698250 (-)
G1323083 NA non-coding upstream 95898 70702047 ~ 70702459 (-)
G1323085 NA non-coding upstream 98961 70705110 ~ 70705420 (-)
G1323088 NA non-coding upstream 106819 70712968 ~ 70713236 (-)
LOC110490645 LOC106576589 other downstream 47896 70543356 ~ 70547418 (-)
G1323036 NA other downstream 55977 70536452 ~ 70537139 (-)
G1322348 NA other downstream 693413 69897748 ~ 69899703 (-)
G1321997 NA other downstream 1030076 69562310 ~ 69563040 (-)
G1321729 NA other downstream 1370088 69220303 ~ 69223028 (-)
G1323207 NA other upstream 419102 71025251 ~ 71039522 (-)
G1323296 LOC106609674 other upstream 596351 71202500 ~ 71237846 (-)
LOC118938840 LOC106576579 other upstream 1251134 71841725 ~ 71923263 (-)
LOC110500989 LOC106576674 other upstream 1441815 72022817 ~ 72150996 (-)
LOC110490626 LOC106576575 other upstream 1558484 72162661 ~ 72192809 (-)

Expression


Co-expression Network