LOC110490694 (LOC106576596)


Basic Information

Item Value
gene id LOC110490694
gene name LOC106576596
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 70781695 ~ 70787736 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036945197.1
AGCAGTGCATTGCATCCCGCCCATAGAGCGGAGCAGCTACGTCAAGAGAATTTGGGATGCGCCCTGGGTCTGTGACTGCCTGGAAACTCTCACCCGTCAGTACAACTTTTTGGAAGTGGCGCTGGAGCTACCAACCTTAATGTGATAGAAGTTAATTGAAATCAAATCGATGAAAAACTTTGCAAAATAATAGGAATTTATCCAACTTTGAATCATGTTTTACGCAAGCTGACAGGAGAATTACGCACGACTAAAAAACACTTCGGTTTACTGAAACCCTCCGACTTTTTTCCTCTATTGCAAATGCAGTAAGGATGTTGGCGAGAAAAAGCATCATCCCGGAGGAGTTCTCCCTACCGGGGCTTGCTTCGAGGGTCCACCGCAAACCAGTGTTCAGGGACCGGGTGAACAAAGCCCGCTTCATCGCCAAGAGCGGATCCTGCAACTTGGCGCACAAGAACATCCGAGAACAGGGAAGATTCTTGCAAGACGTCTTCACCACTCTGGTGGACCTGAAATGGCGCTTCACCCTGGTCATCTTCACCATGACTTTTCTGTGCAGTTGGCTCCTCTTCGCCATGTGCTGGTGGCTCGTGGCCTTTGCCCATGGAGACCTTGTACCCAACCGCACGTCTGGCATTGAGCAGTGCGTCACCAACGTCAAGTCATTCACCTCAGCCTTCCTGTTCTCCATCGAGGTCCAGGTGACCATCGGCTTTGGCCACCGTATGATCACAGAGCAGTGCCCCACGGCCATCGCCGTCCTCATCTTCCAGAACATTGCTGGCCTCATCATCAACGCCATTATGCTGGGGTGCATCTTCATGAAGACAGCCCAGTCGCACCGCCGCGCCGAGACACTCATCTTCAGCCGCAACGCCGTCATCGCCGTGCGCAACAATCGCCTCTGCTTCATGACCCGTGTGGGCGACCTCCGCAAGTCCATGATCATTGGCGCTGCCGTCCGCCTCCAGGTGGTACGCAAGACCACCACCCCCGAAGGCGAGGTCATCCCTATCCATCAGATCGACGTGCAAACGGAGAGCGCCGCGGCGAGTAACTCCATCTTCCTCTTGGCGCCACTCATTATCTGCCATACCATCAATAAGGACAGTCCGCTGTACGACCTGTCGGCCATGGAGCTGCAGTGCAGCGACCTGGAGGTGATTGTGATCTTGGAGGGCGTGGTGGAGACCACGGGCATCACCACCCAGGCCCGGACCTCCTACGTCACCGAGGAGATCCAGTGGGGTCACCGCTTCGTGCCCATCGTGACCGAGGAGGACGGGGTGTACTCGGTGGACTACTCCAAGTTTGGGAACACGGTCAAGGTGGCGACGCCGAGGTGTTCGGCCCGCGAGCTGGACGAGAAGCCCTCCATACTCATCCAGACGCTGCAGAAGAGCGAGCTGAGCCACCAGAACTCACTGAGGAAGAGGAACTCAATGAGGCGGAACAACTCCATGAGGAACGGCGGCGGGAGCTCCGGCACCATGCGGAGGAACAACTCGGCCCTCACCGTGCCCAAAGTGCAGTTCCTCACCCCTGAGGCGGTGGGCCAGAACGTGGCCGTCACATGACACGAGGCCTGGCTCCCATTGGCTGTCCTGCTCTTCCTGGGTGGGACCTCCCATGTTTATCCTCTGGCTCAGTTAGAGCTGACTCTGGTCCTGTTCCCCACACTCTGCCACATATACAGTAGTCAATGCTATACCTGACACACACAATGCCCTGTTATAACTATTGTTGTGAGGATGGATTTAACCGGTTTTAGTTACATATTAGTGTCTCATTTTCAGTCTGGTTCTTTCCAAGTGCCTTTGCCTTTGTCTGGTTCTAAGCTGTAATAGGCATCCACAAGTTGTACTTTATGATGTACATGCCTTTAAACATGTAGTAACTCTTTATATAGCTTTGTACTGAATTCTGTACTCATCACTGAATCCATGTGATGATTTAATTTGCTCTTTAATGTTACTGTGACCAAAGAACATATTATTACAGATGATAATGGCCAACTCCTTTCTGATAGTAGAAGAAAATGATGTTTTGATATCAGCTGCAACGTATTACACACCAACCGGGTTCCTCATTCTTATCAGAACCTTTAATAAAGCATTTACTTCAGTACTGTA

Function

NR:

description
ATP-sensitive inward rectifier potassium channel 8-like

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015272 ATP-activated inward rectifier potassium channel activity molecular_function

KEGG:

id description
K05001 KCNJ8, KIR6.1; potassium inwardly-rectifying channel subfamily J member 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036945197.1 True 2135 mRNA 0.52 3 70781695 70787736

Neighbor

gene id symbol gene type direction distance location
LOC118938960 NA coding downstream 4266 70776831 ~ 70848012 (-)
LOC110490643 LOC106596479 coding downstream 5527 70762977 ~ 70776821 (-)
LOC118936248 cmas coding downstream 26339 70733362 ~ 70755356 (-)
LOC118938838 LOC106576602 coding downstream 132659 70644164 ~ 70649036 (-)
LOC110490633 LOC106576584 coding downstream 175546 70593116 ~ 70606149 (-)
LOC110516361 LOC106576597 coding upstream 3298 70791034 ~ 70860332 (-)
LOC118938899 NA coding upstream 105493 70893229 ~ 70894811 (-)
LOC118936537 LOC106594938 coding upstream 386234 71173970 ~ 71198905 (-)
LOC110490709 LOC106609674 coding upstream 411784 71199520 ~ 71237895 (-)
LOC118938839 NA coding upstream 413512 71201248 ~ 71201989 (-)
G1323101 NA non-coding downstream 48416 70731008 ~ 70733279 (-)
G1323094 NA non-coding downstream 52418 70728898 ~ 70729277 (-)
G1323091 NA non-coding downstream 63622 70717610 ~ 70718073 (-)
G1323130 NA non-coding upstream 65818 70853554 ~ 70853785 (-)
G1323137 NA non-coding upstream 87639 70875375 ~ 70875577 (-)
G1323138 NA non-coding upstream 89062 70876798 ~ 70877602 (-)
G1323151 NA non-coding upstream 109665 70897401 ~ 70898052 (-)
G1323167 NA non-coding upstream 134999 70922735 ~ 70923376 (-)
LOC110490645 LOC106576589 other downstream 236475 70543356 ~ 70547418 (-)
G1323036 NA other downstream 244556 70536452 ~ 70537139 (-)
G1322348 NA other downstream 881992 69897748 ~ 69899703 (-)
G1321997 NA other downstream 1218655 69562310 ~ 69563040 (-)
G1321729 NA other downstream 1558667 69220303 ~ 69223028 (-)
G1323207 NA other upstream 237515 71025251 ~ 71039522 (-)
G1323296 LOC106609674 other upstream 414764 71202500 ~ 71237846 (-)
LOC118938840 LOC106576579 other upstream 1069547 71841725 ~ 71923263 (-)
LOC110500989 LOC106576674 other upstream 1260228 72022817 ~ 72150996 (-)
LOC110490626 LOC106576575 other upstream 1376897 72162661 ~ 72192809 (-)

Expression


Co-expression Network