LOC118938899


Basic Information

Item Value
gene id LOC118938899
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 70893229 ~ 70894811 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036945559.1
AtgggagagTCCACCTCATCTCAGTCCCCCATCAGTCCACCTCCGCCCCCCATCAGTCCACCTCCGTCCCCCATCAGTCCACCTCCGTCCCCCATCAGTCCACCTCCGCCCCCCATCAGTCCACCTCCGCCCCCCATCAGTCCACCTCCGCCCCCCATCAGTCCACCTCCGTCCCCCCATCAGTCCACCTCCGCCCCCCATCAGTCCACCTCCGCCCCCCATCAGTCCACCTCCGTCCCCCATCAGTCCACCTCCGTCCCCCATCAGTCCACCTCCGTCCCCCATCAGTCCACCTCCGTCCCCCATCAGTCCACCTCCGTCCCCCATCAGTCCACCTCCGTCCCCCATCAGTCCACCTCCGTCCCCCATCAGTCCACCTCCGTCCCCCATCAGTCCACCTCCgtccccctccctcacccctctgtGCTGAACACACCTCAGCCCCTATCTTCCCTCCTTCCCACCCTCatccagacagagacagggcagTGGATGAGGAGTGACGGCTGCTGGTCTTATCACAGTGGAATGCTGCTGGTCGCTGTTCACAGTCTGATAAGACTAAATGGAACCGGGGGCATTTCAGCAGGCTGTGGTGAAATGACCAAACACTGA

Function

NR:

description
PREDICTED: target of Nesh-SH3 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036945559.1 True 615 mRNA 0.63 2 70893229 70894811

Neighbor

gene id symbol gene type direction distance location
LOC110516361 LOC106576597 coding downstream 32897 70791034 ~ 70860332 (-)
LOC110490694 LOC106576596 coding downstream 105493 70781695 ~ 70787736 (-)
LOC118938960 NA coding downstream 115800 70776831 ~ 70848012 (-)
LOC110490643 LOC106596479 coding downstream 117061 70762977 ~ 70776821 (-)
LOC118936248 cmas coding downstream 137873 70733362 ~ 70755356 (-)
LOC118936537 LOC106594938 coding upstream 279159 71173970 ~ 71198905 (-)
LOC110490709 LOC106609674 coding upstream 304709 71199520 ~ 71237895 (-)
LOC118938839 NA coding upstream 306437 71201248 ~ 71201989 (-)
LOC110490706 LOC106576521 coding upstream 306450 71201261 ~ 71214069 (-)
LOC110490707 LOC106576520 coding upstream 334057 71228868 ~ 71232129 (-)
G1323138 NA non-coding downstream 15627 70876798 ~ 70877602 (-)
G1323137 NA non-coding downstream 17652 70875375 ~ 70875577 (-)
G1323130 NA non-coding downstream 39444 70853554 ~ 70853785 (-)
G1323151 NA non-coding upstream 2590 70897401 ~ 70898052 (-)
G1323167 NA non-coding upstream 27924 70922735 ~ 70923376 (-)
G1323205 NA non-coding upstream 100579 70995390 ~ 70995795 (-)
G1323206 NA non-coding upstream 118492 71013303 ~ 71013503 (-)
G1323233 NA non-coding upstream 165449 71060260 ~ 71062184 (-)
LOC110490645 LOC106576589 other downstream 348009 70543356 ~ 70547418 (-)
G1323036 NA other downstream 356090 70536452 ~ 70537139 (-)
G1322348 NA other downstream 993526 69897748 ~ 69899703 (-)
G1321997 NA other downstream 1330189 69562310 ~ 69563040 (-)
G1321729 NA other downstream 1670201 69220303 ~ 69223028 (-)
G1323207 NA other upstream 130440 71025251 ~ 71039522 (-)
G1323296 LOC106609674 other upstream 307689 71202500 ~ 71237846 (-)
LOC118938840 LOC106576579 other upstream 962472 71841725 ~ 71923263 (-)
LOC110500989 LOC106576674 other upstream 1153153 72022817 ~ 72150996 (-)
LOC110490626 LOC106576575 other upstream 1269822 72162661 ~ 72192809 (-)

Expression


Co-expression Network