LOC118936537 (LOC106594938)


Basic Information

Item Value
gene id LOC118936537
gene name LOC106594938
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 71173970 ~ 71198905 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036945208.1
CTCTGATAAAAAGAAACAGCGAAAGGGAGAGAGGGCGTATGAAAGAGAGCCGATGAGAATGGTACAAACCCGAACAGCTTTGTGTGTCACACTCGAATACATCGCATCCACAGCTATGACCTAGGCGCGGATCGTCGCTCTCAAGACAAGCGCAACATCGGAGAGAGCAATTACGCACATGGTTCTGATAGAGAATGAATGCGAAGCTGTATCCAACAATTCCAAAACGCCCGGTTGATCTCATTTTGCTACCATTAGAGCATCAACTGGATTACCATAAGGGAGAGACGAGAACGGAGCACAGTAGCAACGTCTTTACAATTGAGGAATAAGAGATTTTGCTCCAATAATTGAATCATTTACTTTTCATCAAAACACAAATATTTGTATGTATTTAGAGGTGTATTTCCAAGGACACATACATTAAAGCACGGATAGCCGTCATTAGGTCCACTCGGATTTGATCATATTGACACTTTATTAGTTATCCTGATGGAAACTGCTTCAAAAGCTCGTCGGCTATCCAATGTGTCCACGGCATCTAACGTGTCCAATGTGTCCACGTCCAGCGCAGGGACTGAGGTAGGACAGAGCGATGTGCAGATTTGGGGGGACAGACCTTTACCTGTCGACTACCTTGGTGACATCTCGATCCTGGATGACGGGAGATGGTCTAACTCTAGCGTGAAGAAACATCACCACAAGCACAACCTGAAGCACCGCTACGAACTGCTGGAGACACTGGGGAAAGGGACATACGGCAAAGTGAAGAAAGCCATCGAGAGACAATCCGGCAAAGTGGTGGCCATTAAGTCCATCAGGAAGGAGAAGATCAAGGATGATCAGGACATGGTTCACATCCGCAGAGAGATCGAGATCATGTCCTCCCTCAAACACCCTCACATCATCTCCATCTACGAAGTGTTTGAGAACAAGGACAAGATAGTGATCGTGATGGAATACGCCAGTAAGGGAGAGTTGTATGATTACATCAGCGAGCGACGgcggctgagcgagagagagacacgacACTTCTTCAGGCAGATTGTTTCTGCCGTGCACCATTGTCACAAGAACGGAGTGGTGCACAGGGATTTAAAACTGGAAAACGTGCTGCTGGATGAAAACTGTAATATCAAGATTGCTGACTTTGGTCTGTCCAACCTTTACCACAAAGACGAGCTCCTTCAGACGTTCTGTGGCAGCCCTCTGTACGCCTCACCAGAGATCGTCAACGGCAGGCCCTACCATGGtccagagGTAGACAGTTGGGCCCTGGGAGTGCTTCTCTACACCCTGGTCTATGGGACCATGCCCTTTGATGGGGAAGACCACAATAAACTCATCCGCCAGATCACCAACGGAGAGTACAGGGAACCTACACAGTCCTCAGATGCTCGTGGTCTGATCCGCTGGATGTTGATGGTTAACCCGGAGCGTCGAGCCACGGTGGAAGACATCGCCAACCACTGGTGGGTCAATTGGGGCTGGAAGAccactgtgtgtgactgtgacgtccagaaggacaacagtggCTGCATCTCTTCTCCAACGCTAGCACGCTTTATCGATTGGCAGAACCGCACCACAGAGTCACCCAGGGTGGTGCCGGTCAAGCCCCCCCGCTCGGAACACCCTGCCGTACCCCCCCACGCTGGCCGCCAGCGCCTGAGGAAGTCCAGGAAGGAGAATGATAGCGGAGCGCTCCACCATCACACCGCGTGGGAAGACAAAGACAAACCAGGACTGAAGAGACCCAAGGGGATCCTGAAGATGCATGTGTCTGAGCAGAGGTCCCACAGCCTGGGGGAGATCGAGCTGAGTCGCTCCCTGCACTTCCACGAGGGAAGGGAGCTGCTCTCCAGCCccgagagagatgaggaagaggacgATGATCAGGATCGCCTGGGGGTCTCGCCGGCCAAGATGGTGCCCACCCTCCCCAAGAAGGGCATCCTGAAGAACAACCAGCAGCGGGAGTCTGGCTACTACTCCTCCCCGGAGCGCAGTGAGTCCTCTGAACTGCTAGGGGGCAGCACCTCCATGGCCCCACCCGCCAGCTCACCAACAAAGAGGTCCATGGGGAGAAAGGGCATATTGAAGCGTAATGGGAAGTACGGCAACTCCACTTCCTTCCACAGTGGCTTGTCCAATATGAGCTACCACGGAGAGACTCCGGGGGACTCGGGCCTCTCTCGCAGCCAGAGTAAACCCTCCAGTATTGTCTGTGAGGAGATGGGTCTCTCCAGTGTTCCCCCCTTAATGGGAATGGATTGGTCTCCCTCGTCCCCGCAGCCACACGTCAGGGCCTGTATGTCGGCTGAGGATCTACTCCAGCTGGCAGGCTTCAGACGGGGCCTCCAGACGGCTGCAGGGGGGCTCCATGGGGGGAAGGTGGGGACCCGAGGGACACCAGGGTCTCCTGGTGACGACGGCAGCTTCTCTCTGCTAGGGGACATGGATGATGTGACCCAGGTCTACCAACACACCCTGGACATCAGCAGCAATCTGACCTAGAGGAGGTGGAGTTGGGAGTTTGGAAGGGAAGGGACATGGGAAGGACAGACACACACTTGAACCTTCATTTCTGGGTTAGGACTGGCCAGGTGTGTTGTGAACTGGGCATCCCAGCCACCTTAATGTACTGAATCTACCCTCTCAGAGACAGTGCTGCTGTACATCTTTATATGTTCAATAGAGCTAAATAAGTATTGTGTTGTATGTCATTCAGAGTCACAAACCATGCTGTGGTGAAGCTCAATGTAGTAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATAGACAGTCAGGACTACTGTTCATGTTGTCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATGGACAGTCAGGACTACTGTTCATGTTGTCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATAGACAGTCAGGACTACTGTTCATGTTATCTCAATGTAATGGACAGTCAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATGGACAGTTAGGACTACTGTTCATGTTGTCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATAGACAGTCAGGACTACTCTCAATGTAATAGACAGTCAGGACTACTGTTCATGTTATCTCAATGTAACAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATGGACAGTTAGGACTACTGTTCATGTTATCTCAATATAATGGACAGTCAGGACTACTCTCAATGTAATAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATGGACAGTTAGGACTACTGTTCATGTTATCTCAATATAATGGACAGTCAGGACTACTCTCAATGTAATAGACAGTTAGGACTACTGTTCATGTTATCTCAATGTAATAGACAGTTAGGACTACTGTTCATGTTATCTCAACCTAATGATAACCGTGTGTTATCTATTTATATTGTTGAAACAGACATATATTGCCTGTGTGTTTTGGTAATTTCAAGACGTACTGAGGTGTATGTACCCTTCAAGGAATGGTACTGTATAATAGTATTGCTTGATTGAATTGACATGAATGCCATACTTGATATTGGTCCTAATCTAGCAGGACATCTATTGTTCAGTATCACAGTGGGAAGGTTGAAGAGCAAACCGTGTGTATTGATATACGTCTACTGTATGGGCCGTCCACAGGAAGTGCCTTTATTAGTGCTATGTTATCATGTACTGTATTTCCTGAAGGTTTATGGAGGAACAGATAGATAACCAACCAAACTCACCACATGAGACACAGCTATAGGGAGGCGATTCACAGAGCTGTGACCACGCAGTCTCCCGAGTCGAAACAACTAGGACTTGTTCATGTTCGTAACCATTTGGTTTCACAGTAGAACTGTCGTTGTTTTAGAAATGGGACTGAAAGACAGAACGACTGAAAGAACAGAAGGGTAGAGACGTGTAGTCAAAACTTAAGTTGATTCACAGAGTTGTGGCTACAAGCCCTCCAGTCTACAGGACTAGCTCATGTGTAGGCCATATGTAAATGAACTGTCGTTGTTTTAGAAAGAGAAATACTGAAAAAACAAGGGGTAGATAGACGTGAGTTAGTGGGAGGGGTTAATGGGTTGGTTGTAGAGGTCTTGTTTGTGGAGGGAAGTTGGGTGCTGGCCAGGGCTGTTACACCTCTTCCTCCCCAGACTGAAGActgagagtggagagagaaaagagggggttgagagagagagaaagagagagagagggctgagagagggctgagagggctgagagagagagagagagagagagagtgctgagagagtgctgagagagagagagagagaggagatgatagacagagagagcgataGTAGCTTAGTGTAGCTGGGAAAAGaaagggggagtagagagagagagaaaggttgagTGAAAAAGGTAAAATGGAAAGAATGTTTGGAAGGGTGAAGGGAATTATGTTTCAGCTGACCGAATAAGTTCAGCTTTAAGTTGGGAAGATACACAGTTCAACACATTTCAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGTCACTGTAGCTGAAAGTCATTACAGCCACTGCAGCTGAAAGTCATTACAGTCACTGTAGCTGAAGGTCATTACAGTCACTGTAGGTGAAAGTCATTACAGTCACTGTAGCTGGTACTATACATCCTTGGTAgaacagcagtgtgttagctCACTGTGAGTGTTACATATAGAttaccttctctctctacagcctGTGTGCTGCTGGACCAGTTATATGTGCTCTATGAAGCGTGGCTTGGTGAGAGGGCATAACCTTCAGTTCCACTCTAGAACAGAAATAACCCAGGCAATTATATGTTTCAGTGTGTTTGGGTTTCTCAAACACCACACGGTTGTTTAAATGTCtgggtttgtgtcccaaatggcaccctattggtTACTTTTGAACGCAGTTCTATGGGCCCTTTgtgaaaaggagtgcactacataggaaataggttgccatttgggacacaggcccaGACATTTAAACAATCGGGTGGTGTCCGAGAAACCCAAACAGACTGAAGCATATTAGTGTTGAGAAATCAATGGAGCCCCACTGTGGAAATGTCACATACGCCAACGGATAGCTcatcaaaataaatcaaaatcAGCCAATGAATGATTCTGAAAGGTCAGGGGTCTTTATGGCTCAGGGCCCAGGGTGTTACCATAACAACCAACAGTCTTGTTAAGTGTTGTATGGACTGAAATGGTATTTTGTAATTGGATTTTACAGCGCTGAAAAATGATACTATGTTAGTATTTTCATAGGATTTGTTTTTAATCATGCTTCTGTTTTTGATTTTTCCAAAATATAGAAACATTGTATGGTTTTATTTTATGGGCAGAGGATGTGTACCAGGTCTGCCTTAGTAACTGGAAGGGGACCTGCCTCCTATGAAAACAGGGTtagcgtatgtgtgtgtataagggacTGAAGAGGTTAAAGTTCAACAACAGTAAAGAACAAGTTGTAAACACAAGTGATTCTCTGTGAGTCGTAagactgaaaacacacacatgcacgtgcctgcgaacgcacgcacgcacacacacacacacacacacacctatgtaGAATGTAATGGAAAAGAAAGGGGTGCCATCAAGTCTCAACAGGTCTAAGAGCCCCCAAGCTGCCCTCTGCCTAACTAGACAAAACAGATGTTAGCTTACATCTGTTTGTTACAATATGTCATATAACTATAGGAAAACTTGACTAGATATTATCTTATGATGAAGTATTATAATGttatttaagctttattttgCTGCTGTCTATTAATAGTGAAgttattactgttactatagttactatctGGTTATAGATGGTTCAACCTGGATCGTGCTTTTGTTTGTTACCATCACAGATGTGCTGTTCTGGTTTTTATAAAAACAGTTTCAGATTGTGTAATAGCGTTGTTCTCTACTACGTATTACAGTGGAAATCATGTATGTAGTCAGGAGAGTGAGGAAACCACAGATTTTCACAATATCTTCTCTCTGAATCATCTCAAATAAACAGCTTCAT

Function

NR:

description
PREDICTED: NUAK family SNF1-like kinase 1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08800 NUAK; NUAK family, SNF1-like kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036945208.1 True 6477 mRNA 0.46 7 71173970 71198905

Neighbor

gene id symbol gene type direction distance location
LOC118938899 NA coding downstream 279159 70893229 ~ 70894811 (-)
LOC110516361 LOC106576597 coding downstream 313638 70791034 ~ 70860332 (-)
LOC110490694 LOC106576596 coding downstream 386234 70781695 ~ 70787736 (-)
LOC118938960 NA coding downstream 396541 70776831 ~ 70848012 (-)
LOC110490643 LOC106596479 coding downstream 397802 70762977 ~ 70776821 (-)
LOC110490709 LOC106609674 coding upstream 615 71199520 ~ 71237895 (-)
LOC118938839 NA coding upstream 2343 71201248 ~ 71201989 (-)
LOC110490706 LOC106576521 coding upstream 2356 71201261 ~ 71214069 (-)
LOC110490707 LOC106576520 coding upstream 29963 71228868 ~ 71232129 (-)
LOC118938931 LOC106592567 coding upstream 49011 71247916 ~ 71263582 (-)
G1323248 NA non-coding downstream 27828 71145605 ~ 71146142 (-)
G1323238 NA non-coding downstream 57422 71114434 ~ 71116548 (-)
G1323235 NA non-coding downstream 107670 71065825 ~ 71066300 (-)
G1323233 NA non-coding downstream 111786 71060260 ~ 71062184 (-)
G1323206 NA non-coding downstream 160467 71013303 ~ 71013503 (-)
G1323298 NA non-coding upstream 17147 71216052 ~ 71221279 (-)
G1323304 NA non-coding upstream 42163 71241068 ~ 71241369 (-)
G1323309 NA non-coding upstream 47097 71246002 ~ 71246204 (-)
G1323319 NA non-coding upstream 70546 71269451 ~ 71269683 (-)
G1323207 NA other downstream 134448 71025251 ~ 71039522 (-)
LOC110490645 LOC106576589 other downstream 628750 70543356 ~ 70547418 (-)
G1323036 NA other downstream 636831 70536452 ~ 70537139 (-)
G1322348 NA other downstream 1274267 69897748 ~ 69899703 (-)
G1321997 NA other downstream 1610930 69562310 ~ 69563040 (-)
G1323296 LOC106609674 other upstream 3595 71202500 ~ 71237846 (-)
LOC118938840 LOC106576579 other upstream 658378 71841725 ~ 71923263 (-)
LOC110500989 LOC106576674 other upstream 849059 72022817 ~ 72150996 (-)
LOC110490626 LOC106576575 other upstream 965728 72162661 ~ 72192809 (-)
G1324464 typh other upstream 1041643 72240548 ~ 72260352 (-)

Expression


Co-expression Network