Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938842 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 72018717 ~ 72019300 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005036203.1 | True | 528 | mRNA | 0.40 | 2 | 72018717 | 72019300 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938841 | NA | coding | upstream | 42568 | 71973676 ~ 71976465 (+) |
| LOC110490816 | LOC106609794 | coding | upstream | 240014 | 71764771 ~ 71778703 (+) |
| LOC110490815 | LOC106576513 | coding | upstream | 255274 | 71738171 ~ 71763443 (+) |
| LOC110490715 | zcrb1 | coding | upstream | 281526 | 71734459 ~ 71737191 (+) |
| LOC110499701 | LOC106576510 | coding | upstream | 333106 | 71630292 ~ 71685611 (+) |
| LOC118938843 | NA | coding | downstream | 34460 | 72053760 ~ 72054124 (+) |
| LOC110490794 | LOC106598106 | coding | downstream | 181667 | 72200967 ~ 72203946 (+) |
| si:ch73-139j3.4 | NA | coding | downstream | 210319 | 72229619 ~ 72236599 (+) |
| LOC118938845 | NA | coding | downstream | 217630 | 72236930 ~ 72238063 (+) |
| LOC110516855 | typh | coding | downstream | 218936 | 72238236 ~ 72241900 (+) |
| G1323882 | NA | non-coding | upstream | 80 | 72017758 ~ 72018637 (+) |
| G1323879 | NA | non-coding | upstream | 5835 | 72012545 ~ 72012882 (+) |
| G1323873 | NA | non-coding | upstream | 10093 | 72007035 ~ 72008624 (+) |
| G1323871 | NA | non-coding | upstream | 15867 | 72001021 ~ 72002850 (+) |
| G1323868 | LOC100380742 | non-coding | upstream | 20052 | 71997801 ~ 71998665 (+) |
| G1323886 | NA | non-coding | downstream | 13973 | 72033273 ~ 72034362 (+) |
| G1323894 | NA | non-coding | downstream | 27103 | 72046403 ~ 72047343 (+) |
| G1323899 | NA | non-coding | downstream | 36100 | 72055400 ~ 72056378 (+) |
| G1323904 | NA | non-coding | downstream | 46675 | 72065975 ~ 72067581 (+) |
| G1323905 | NA | non-coding | downstream | 50421 | 72069721 ~ 72071674 (+) |
| G1322763 | NA | other | upstream | 1081572 | 70936225 ~ 70937145 (+) |
| G1322725 | NA | other | upstream | 1170773 | 70843945 ~ 70847944 (+) |
| G1322161 | NA | other | upstream | 2115059 | 69900944 ~ 69903658 (+) |
| G1322119 | NA | other | upstream | 2218855 | 69798196 ~ 69799862 (+) |
| G1321053 | NA | other | upstream | 3222736 | 68794598 ~ 68795981 (+) |
| G1323962 | NA | other | downstream | 171123 | 72190423 ~ 72191163 (+) |
| LOC110531894 | LOC106598741 | other | downstream | 436917 | 72416050 ~ 72481441 (+) |
| LOC110490361 | LOC106609821 | other | downstream | 722913 | 72742193 ~ 72850175 (+) |
| G1324156 | LOC106576365 | other | downstream | 834266 | 72853566 ~ 72856022 (+) |
| G1324195 | NA | other | downstream | 841520 | 72860820 ~ 72865809 (+) |
