LOC118938843


Basic Information

Item Value
gene id LOC118938843
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 72053760 ~ 72054124 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036204.1
GTTGGAGTCAGGTGGGTCAGGTATAGTCCAGGTAGGTTATACTACAGGTGTTGGAGTCAGGTGGGTCAGGTATATTCCAGGTAGGTTATACTACAGGTGTTGGAGTCAGGTGGGTCAGGTATATTCCAGGTAGGTTATACTACAGGTGTTGGAGTCAGGTGGGTCAGGTATATTCCAGGTAGGTTATACTACAGGTGTTGGAGTCAGGTGGGTCAGGTATATTCCAGGTAGGTTATACTACAGGTGTTGGAGTCAGGTGGGTCAGGTATATTCCAGGTAGGTTATACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036204.1 True 289 mRNA 0.47 3 72053760 72054124

Neighbor

gene id symbol gene type direction distance location
LOC118938842 NA coding upstream 34460 72018717 ~ 72019300 (+)
LOC118938841 NA coding upstream 77611 71973676 ~ 71976465 (+)
LOC110490816 LOC106609794 coding upstream 275057 71764771 ~ 71778703 (+)
LOC110490815 LOC106576513 coding upstream 290317 71738171 ~ 71763443 (+)
LOC110490715 zcrb1 coding upstream 316569 71734459 ~ 71737191 (+)
LOC110490794 LOC106598106 coding downstream 146843 72200967 ~ 72203946 (+)
si:ch73-139j3.4 NA coding downstream 175495 72229619 ~ 72236599 (+)
LOC118938845 NA coding downstream 182806 72236930 ~ 72238063 (+)
LOC110516855 typh coding downstream 184112 72238236 ~ 72241900 (+)
LOC118938844 typh coding downstream 197779 72251903 ~ 72256569 (+)
G1323894 NA non-coding upstream 6417 72046403 ~ 72047343 (+)
G1323886 NA non-coding upstream 19398 72033273 ~ 72034362 (+)
G1323882 NA non-coding upstream 35123 72017758 ~ 72018637 (+)
G1323879 NA non-coding upstream 40878 72012545 ~ 72012882 (+)
G1323873 NA non-coding upstream 45136 72007035 ~ 72008624 (+)
G1323899 NA non-coding downstream 1276 72055400 ~ 72056378 (+)
G1323904 NA non-coding downstream 11851 72065975 ~ 72067581 (+)
G1323905 NA non-coding downstream 15597 72069721 ~ 72071674 (+)
G1323906 NA non-coding downstream 16007 72070131 ~ 72070688 (+)
G1323921 NA non-coding downstream 48994 72103118 ~ 72103412 (+)
G1322763 NA other upstream 1116615 70936225 ~ 70937145 (+)
G1322725 NA other upstream 1205816 70843945 ~ 70847944 (+)
G1322161 NA other upstream 2150102 69900944 ~ 69903658 (+)
G1322119 NA other upstream 2253898 69798196 ~ 69799862 (+)
G1321053 NA other upstream 3257779 68794598 ~ 68795981 (+)
G1323962 NA other downstream 136299 72190423 ~ 72191163 (+)
LOC110531894 LOC106598741 other downstream 402093 72416050 ~ 72481441 (+)
LOC110490361 LOC106609821 other downstream 688089 72742193 ~ 72850175 (+)
G1324156 LOC106576365 other downstream 799442 72853566 ~ 72856022 (+)
G1324195 NA other downstream 806696 72860820 ~ 72865809 (+)

Expression


Co-expression Network