si:ch73-139j3.4


Basic Information

Item Value
gene id si:ch73-139j3.4
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 72229619 ~ 72236599 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036945256.1
ACTCTGTTCCCAAGGTGATGGAACCAGGAAATGGCACCTACCAAATAAAGCATTACCTTAACAGTAGTCAGGCAGACAGGGAGGTGAGAGAAAAATAGTTTGTCTGCCATTGCTGTTGCCTGTCGCCGTGTCAGTGAGAAGTAACCACAGATAAAATATCAGGAAGACATCATGAAGGTGGACGACAAGTTTCAAATTCTCAAATTCTTCGCAGCAGTTTTCAACTCTGTTTTCTTGATTCTGGGGCTCTGTATCTTTGGATGTGCGGTGTGGATCTTGTTTGACAAAGACAATTTCATTGCTGTTCTCAGCTCTGttgaggTGAAGACTGTAGCTGGGGGACTGTTCATCATTGGTCTGGTGGTGGTTGGTGTCACTATCCTGGGGTGTATGGGAGCCCAACTGGAGAACAGGTGCTTCCTACTACTGTACATGGGCTTCCTGATCTGCATCGTCCTTGGTCAGCTGTTTGTCATCTTCATCATTTTGTTAAATCATGGAAAGATCACATCTAAGATGAAAATAGAAGTGGATAAGATCATCACTGAATATGGAACAAACCCTGACAATCAACGACATTGGAAGCTTCTGGATAATGTACAGCGCTATgggcacTGCTGTGGTATGCAGAGTCCTAATGACTGGCAGAGCAACATGTTCATTAAGAACAACAGTCTGATAGAGGTGTATCCCTGTTCCTGTTTCAACACCACGGACTGTCCTGCCATCTCAGGATTCAGCACACTGCTGTTTGGAAATGGAAGTGAAACACAGATCCATCCACAGAGATGTGTAGACATAATCACCAACTGGCTGAAGGAGAACACTTTGACAATAGTGGGAATGGAAGTGGGCCTGCTAATCAGTCAgGTCCTCCAGTTTATAGTGGCTGTGTATCTGTACCAGACTGTTGGTCAGAAAGTCAAGCTGAGGAATGTTAGTCAACTGATTCTCTCTGAGGAACATTGTGAACCAAACCCTGACTACCTTGATGACCCTGACTACCCTGACCAAAACCATACCTATCCTGAACCAAACCAGGCCTACGCACATACAAACCTTGCCTACCCTGAAGAAATCCTTGCCTACCCTGATGACCAACACCCGGCCTACTCCGGACCAAACCATTCCTACCACCACTAACCAGGACCAGAGTGTTTCTGTATGACTGAAGACACTTTGGGCGCTAACATTGAATtgctcagtggaggctggtgagaggagatataggaggataggctcattgtaatggctggaaaggaatgattggaacggagtcaaacgtggtttccatgtgtttgataccattccatcaattccattccagccataacaatgagcccatcctcctgtagctcctcccaccagccgccACTGGAATTGCTCAAATTCTAAAAGCTCAGTTCAGCGCTTTCAGCCACACAGGCCTTCTATTAAAGATGGTTTTCTGCTGACAATGAGAACAATCTTTTTCCATTGTTTTCCATTGTTTTTTACTGTTTATGGCTTAATGACCCGATCAGCCCTAACTGGTCAGCCTCACCTTGTGTGAATAGTTGTGTACTGTACTGGTCAACCTCACCTTGTGTGAATAGTTGTGTACTGTACTGGTCAGCCTGAACAGTTACTTGGAAATGTAGACATAAAGAAAGGTACCACCATTTTGAAACTGCAAGCCGACTCCACCGTTGACTAATACAAACAACTTTTAAATCCCTTTTTATTTCACAAGACAGTTGTTATGTCTGCAGACGAACAGCGCTAAGAGCGCTGCCTCGAGGTGTTTCAGTGAGTTTCACAGTGCCATCATTGACTGATGCCTGACCTTGGTGATAAGTGATTGACTGTCTGTAAATTACACATTAAAATCTTCAAAATGG

Function

NR:

description
CD82 antigen-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036945256.1 True 1880 mRNA 0.45 8 72229619 72236599

Neighbor

gene id symbol gene type direction distance location
LOC110490794 LOC106598106 coding upstream 25673 72200967 ~ 72203946 (+)
LOC118938843 NA coding upstream 175495 72053760 ~ 72054124 (+)
LOC118938842 NA coding upstream 210319 72018717 ~ 72019300 (+)
LOC118938841 NA coding upstream 253470 71973676 ~ 71976465 (+)
LOC110490816 LOC106609794 coding upstream 450916 71764771 ~ 71778703 (+)
LOC118938845 NA coding downstream 331 72236930 ~ 72238063 (+)
LOC110516855 typh coding downstream 1637 72238236 ~ 72241900 (+)
LOC118938844 typh coding downstream 15304 72251903 ~ 72256569 (+)
LOC110490623 LOC106597683 coding downstream 50565 72287164 ~ 72370434 (+)
LOC118938846 tsn8 coding downstream 86387 72322986 ~ 72335863 (+)
G1323965 NA non-coding upstream 30161 72199243 ~ 72199458 (+)
G1323963 NA non-coding upstream 34608 72194653 ~ 72195011 (+)
G1323951 NA non-coding upstream 57064 72168044 ~ 72172555 (+)
G1323952 NA non-coding upstream 58990 72168476 ~ 72170629 (+)
G1323949 NA non-coding upstream 65185 72163751 ~ 72164434 (+)
G1323981 NA non-coding downstream 34922 72271521 ~ 72271892 (+)
G1323992 NA non-coding downstream 44559 72281158 ~ 72281463 (+)
G1323993 NA non-coding downstream 44921 72281520 ~ 72284845 (+)
G1324000 NA non-coding downstream 74251 72310850 ~ 72311427 (+)
G1323962 NA other upstream 38456 72190423 ~ 72191163 (+)
G1322763 NA other upstream 1292474 70936225 ~ 70937145 (+)
G1322725 NA other upstream 1381675 70843945 ~ 70847944 (+)
G1322161 NA other upstream 2325961 69900944 ~ 69903658 (+)
G1322119 NA other upstream 2429757 69798196 ~ 69799862 (+)
LOC110531894 LOC106598741 other downstream 219618 72416050 ~ 72481441 (+)
LOC110490361 LOC106609821 other downstream 505614 72742193 ~ 72850175 (+)
G1324156 LOC106576365 other downstream 616967 72853566 ~ 72856022 (+)
G1324195 NA other downstream 624221 72860820 ~ 72865809 (+)
G1324240 NA other downstream 669111 72905710 ~ 72906089 (+)

Expression


Co-expression Network