LOC118938845


Basic Information

Item Value
gene id LOC118938845
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 72236930 ~ 72238063 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036216.1
TCAGATGTTTTTACGTCAAAATGACTGTTTCCCCTTCTGATTCGTGATGGGTTGTGACTACTGTCGTAGTTAATGACTAACTGACCCGCTCCACCACTCACACCCATTGGTCACTAGTCCttccatacagacagacagagaggggtatTTGACCGGTGTGTGTTCTCAAGGTTGGAAGACATGACAGTGTTCAGGAGCAGCGTTCCGGTACAGTAAATTCAGCTGACTAGTTCAGCCAACAGAAACGCCCTGATCAAACAGACTTTCCAAGACAACACTAGAACTCTTCTAAGTCAAGTCAGCTGTGTTTCAGTCCGCTGTGTTTCAGTCCGCTGTGTGTCAgtcagctgtgtgtcagtccgctgtgtgtcagtcc

Function

NR:

description
PREDICTED: mucin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036216.1 True 376 mRNA 0.48 3 72236930 72238063

Neighbor

gene id symbol gene type direction distance location
si:ch73-139j3.4 NA coding upstream 331 72229619 ~ 72236599 (+)
LOC110490794 LOC106598106 coding upstream 32984 72200967 ~ 72203946 (+)
LOC118938843 NA coding upstream 182806 72053760 ~ 72054124 (+)
LOC118938842 NA coding upstream 217630 72018717 ~ 72019300 (+)
LOC118938841 NA coding upstream 260781 71973676 ~ 71976465 (+)
LOC110516855 typh coding downstream 173 72238236 ~ 72241900 (+)
LOC118938844 typh coding downstream 13840 72251903 ~ 72256569 (+)
LOC110490623 LOC106597683 coding downstream 49101 72287164 ~ 72370434 (+)
LOC118938846 tsn8 coding downstream 84923 72322986 ~ 72335863 (+)
LOC110516399 LOC106592662 coding downstream 102018 72340081 ~ 72346916 (+)
G1323965 NA non-coding upstream 37472 72199243 ~ 72199458 (+)
G1323963 NA non-coding upstream 41919 72194653 ~ 72195011 (+)
G1323951 NA non-coding upstream 64375 72168044 ~ 72172555 (+)
G1323952 NA non-coding upstream 66301 72168476 ~ 72170629 (+)
G1323949 NA non-coding upstream 72496 72163751 ~ 72164434 (+)
G1323981 NA non-coding downstream 33458 72271521 ~ 72271892 (+)
G1323992 NA non-coding downstream 43095 72281158 ~ 72281463 (+)
G1323993 NA non-coding downstream 43457 72281520 ~ 72284845 (+)
G1324000 NA non-coding downstream 72787 72310850 ~ 72311427 (+)
G1323962 NA other upstream 45767 72190423 ~ 72191163 (+)
G1322763 NA other upstream 1299785 70936225 ~ 70937145 (+)
G1322725 NA other upstream 1388986 70843945 ~ 70847944 (+)
G1322161 NA other upstream 2333272 69900944 ~ 69903658 (+)
G1322119 NA other upstream 2437068 69798196 ~ 69799862 (+)
LOC110531894 LOC106598741 other downstream 218154 72416050 ~ 72481441 (+)
LOC110490361 LOC106609821 other downstream 504150 72742193 ~ 72850175 (+)
G1324156 LOC106576365 other downstream 615503 72853566 ~ 72856022 (+)
G1324195 NA other downstream 622757 72860820 ~ 72865809 (+)
G1324240 NA other downstream 667647 72905710 ~ 72906089 (+)

Expression


Co-expression Network