LOC118938850


Basic Information

Item Value
gene id LOC118938850
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 73694833 ~ 73698637 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036230.1
GAAGGGGCTATGACACAGATTGTCTTCCAGGAAGTAAGGCcccttaactaggtctttccttaaGTCCGCTCTGCACAGGACTCTGTGaaacacagagcagagagaaacGCTTTAGCaggtgtactgtatgtcctggGATGGCATTAGGACACGTATCTGGTGCTGTGaaacacagagcagagagaaaccttttagcaggtgtactgtatgtcctggGATGGCATTAGGACACATATCTGGTGCTGTTTTCAGCCTCGGAAACACGTTGTTTACCTGTTtacccatagagatacagaccgTCACAACAGATCCTTTAAATACccgtagagatacagacccatagagatacagacccatagagatacagacccgtagag
>TU1513266
CTGCCTGAAGGGGCTATGACACAGATTGTCTTCCAGGAAGTAAGGCcccttaactaggtctttccttaaGTCCGCTCTGCACAGGACTCTGTGaaacacagagcagagagaaacGCTTTAGCaggtgtactgtatgtcctggGATGGCATTAGGACACGTATCTGGTGCTGTGaaacacagagcagagagaaaccttttagcaggtgtactgtatgtcctggGATGGCATTAGGACACATATCTGGTGCTGTTTTCAGCCTCGGAAACACGTTGTTTACCTGTTtacccatagagatacagaccgTCACAACAGATCCTTTAAATACccgtagagatacagacccatagagatacagacccatagagatacagacccgtagagatacagacccatagagatacagaccgTCACAACAGATCATTTAAATACccgtagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccgtagagatacagacccgtagagatacagacccatagagatacagacccatagagatacagaccgTCAGAACAGATCATTTAAATACccgtagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccgtagagatacagacccatagagatacagacccatagagatacagaaCGTCACAACAGATCCTTTAAATACccgtagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccgTAGAGATACAGAACGTCACAACAGATCCTTTAAATACccgtagagatacagacccatagagatacagacccgtagagatacagacccgtagagatacagacccgtagagatacagacccatagagatacagacccatagagatacagaaCGTCACAACAGATCCTTTAAATACccgtagagatacagacccatagagatacagaaCGTCAGAACAGATCCTGTAAATACccgtagagatacagacccatagagatacagaaCGTCAGAACAGATCCTTTAAATACccgtagagatacagacccatagagatacagacccgTAGAGATACAGACCCGTAGAGATACAGAACGTCACAACAGATCCTTTAAATACccgtagagatacagacccatagagatacagaaCGTCAGAACAGATCCTGTAAATACccgtagagatacagacccatagagatacagaaCGTCAGAACAGATCCTGTAAATACccgtagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccgtagagatacagacccgtagagatacagacccatagagatacagacccatagagatacagacccgTAGAGATACAGAACGTCACAACAGATCCTTTAAATACccgtagagatacagacccatagagatacagaaCGTCAGAACAGATCCTGTAAATACccgtagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccgtagagatacagacccatagagatacagaccgTCACAACAGATCATTTAAATACccgtagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccgtagagatacagacccgtagagatacagacccatagagatacagacccatagagatacagaccgTCAGAACAGATCATTTAAATACccgtagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccgtagagatacagacccatagagagacagacccatagagatacagaaCGTCACAACAGATCCTTTAAATACccgtagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccgTAGAGATACAGAACGTCACAACAGATCCTTTAAATACccgtagagatacagacccatagagatacagacccgtagagatacagacccgtagagatacagacccgtagagatacagacccatagagatacagacccatagagatacagaaCGTCACAACAGATCCTTTAAATACccgtagagatacagacccatagagatacagaaCGTCAGAACAGATCCTGTAAATACccgtagagatacagacccatagagatacagaaCGTCAGAACAGATCCTTTAAATACccgtagagatacagacccatagagatacagacccgtagagatacagacccatagagatacagaaCGTCACAACAGATCCTTTAAATACccgtagagatacagacccatagagatacagaaCGTCAGAACAGATCCTGTAAATACccgtagagatacagacccatagagatacagaaCGTCAGAACAGATCCTTTAAATACccgtagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccgtagagatacagacccgtagagatacagacccatagagatacagacccatagagatacagacccgTAGAGATACAGAACGTCACAACAGATCCTTTAAATACccgtagagatacagacccatagagatacagaaCGTCAGAACAGATCCTGTAAATACccgtagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccatagagatacagacccgtagagatacagacccatagagatacagacccatagagatacagacccgtagagatacagacccatagagatacagaaCGTCACAACAGATCCTTTAAATACCCGTAGCCAGTCGATGTGTTTACCCAGAATCCTCTctgtaacatgttttcacatcaTCAGACATGTCATTAACCCAGTTGATGTGTTTACCCAGAATCCTCTctgtaacatgttttcacatcaGCGGACATTTTGAAACACCAGGCACCATTTAGTCTCAGCCCGCCAGTATTCAGTTGACTTGTAATGGAAGAGTCTGTACAGACTAAGGAGAAGACCAAGGCTTGTAGGAGAAGAGTCTGTACAGACTAAGGAGAAGACCAAGGATTGTAGGACAAGAGTCTGCACAGACTAAGGAGAAGACCAAGGATTGTAGGACAAGAGTCTGCACAGACTAAGGAGAAGACCAAGGATTGTAGTGGAAGAGTCTGTACAGACTAAGGAGAAGACCAAGGCTTGTAGTGGAAGAGTCTGTACAGACTAAGGAGAAGACCAAGGCTTGgtcacaaatggcaccttatACCCTACTACACAGTGCACTGCTATGGTCcctggtagaaagtagtgcactatatagggaatagagtatgATTTGGTATGCAGGCCAATTCCAGCATGTTATTCTTTCATCTTCAAAGTTCAAGGTGCTTTGCTATCTGgttagtggcacacacacacacacacacacacacacacac

Function

NR:

description
uncharacterized protein si:ch1073-263o8.2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036230.1 False 377 mRNA 0.47 2 73694839 73695295
TU1513266 True 3725 lncRNA 0.44 2 73694833 73698637

Neighbor

gene id symbol gene type direction distance location
LOC110517131 LOC105024897 coding upstream 157891 73258523 ~ 73536948 (+)
LOC118938849 LOC106609835 coding upstream 440932 73172193 ~ 73254659 (+)
LOC110490361 LOC106609821 coding upstream 844664 72742193 ~ 72850175 (+)
LOC110499728 NA coding upstream 865319 72826513 ~ 72829520 (+)
LOC110515111 LOC106561326 coding upstream 960369 72551117 ~ 72734470 (+)
LOC118938852 NA coding downstream 331795 74027090 ~ 74132032 (+)
LOC118938853 NA coding downstream 438925 74134220 ~ 74140504 (+)
LOC118938854 NA coding downstream 497786 74193081 ~ 74199908 (+)
LOC118936538 wif1 coding downstream 562240 74257535 ~ 74325622 (+)
LOC110513649 NA coding downstream 652746 74348041 ~ 74352684 (+)
G1325276 NA non-coding upstream 670 73692220 ~ 73694169 (+)
G1325269 NA non-coding upstream 21340 73672602 ~ 73673499 (+)
G1325265 NA non-coding upstream 53068 73641498 ~ 73641771 (+)
G1325257 NA non-coding upstream 61492 73633098 ~ 73633347 (+)
G1325252 NA non-coding upstream 124481 73570120 ~ 73570358 (+)
G1325281 NA non-coding downstream 12540 73707835 ~ 73708883 (+)
G1325284 NA non-coding downstream 20183 73715478 ~ 73716066 (+)
G1325286 NA non-coding downstream 22197 73717492 ~ 73718000 (+)
G1325290 NA non-coding downstream 34146 73729441 ~ 73729817 (+)
G1325292 NA non-coding downstream 35836 73731131 ~ 73793106 (+)
G1324240 NA other upstream 788750 72905710 ~ 72906089 (+)
G1324195 NA other upstream 829030 72860820 ~ 72865809 (+)
G1324156 LOC106576365 other upstream 838817 72853566 ~ 72856022 (+)
G1325337 NA other downstream 161049 73856344 ~ 73856674 (+)
G1325481 NA other downstream 543044 74238339 ~ 74240169 (+)
LOC110517153 cpm other downstream 1032504 74657149 ~ 74743482 (+)
G1326191 NA other downstream 1418394 75113689 ~ 75114514 (+)

Expression


Co-expression Network