Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938852 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 74027090 ~ 74132032 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036945350.1 | False | 1910 | mRNA | 0.45 | 5 | 74027090 | 74131948 |
| TU1513440 | True | 1700 | TUCP | 0.44 | 5 | 74027384 | 74132032 |
73,940,000
73,960,000
73,980,000
74,000,000
74,020,000
74,040,000
74,060,000
74,080,000
74,100,000
74,120,000
74,140,000
NC_048579.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936425 | lmo3 | coding | upstream | 223746 | 73677084 ~ 73803344 (+) |
| LOC118938850 | NA | coding | upstream | 331795 | 73694833 ~ 73698637 (+) |
| LOC110517131 | LOC105024897 | coding | upstream | 490142 | 73258523 ~ 73536948 (+) |
| LOC118938849 | LOC106609835 | coding | upstream | 773183 | 73172193 ~ 73254659 (+) |
| LOC110490361 | LOC106609821 | coding | upstream | 1176915 | 72742193 ~ 72850175 (+) |
| LOC118938853 | NA | coding | downstream | 2272 | 74134220 ~ 74140504 (+) |
| LOC118938854 | NA | coding | downstream | 61133 | 74193081 ~ 74199908 (+) |
| LOC118936538 | wif1 | coding | downstream | 125587 | 74257535 ~ 74325622 (+) |
| LOC110513649 | NA | coding | downstream | 216093 | 74348041 ~ 74352684 (+) |
| LOC110491891 | b2m | coding | downstream | 242398 | 74369537 ~ 74377365 (+) |
| G1325408 | NA | non-coding | upstream | 5238 | 74021442 ~ 74021852 (+) |
| G1325405 | NA | non-coding | upstream | 19365 | 74007185 ~ 74007725 (+) |
| G1325403 | NA | non-coding | upstream | 23833 | 74003024 ~ 74003257 (+) |
| G1325401 | NA | non-coding | upstream | 29419 | 73997099 ~ 73997671 (+) |
| G1325399 | NA | non-coding | upstream | 32149 | 73994557 ~ 73994941 (+) |
| G1325449 | NA | non-coding | downstream | 28070 | 74160018 ~ 74214568 (+) |
| G1325458 | NA | non-coding | downstream | 34339 | 74166287 ~ 74166608 (+) |
| G1325459 | NA | non-coding | downstream | 36593 | 74168541 ~ 74169053 (+) |
| G1325380 | NA | non-coding | downstream | 86406 | 74218354 ~ 74219254 (+) |
| G1325337 | NA | other | upstream | 170416 | 73856344 ~ 73856674 (+) |
| G1324240 | NA | other | upstream | 1121001 | 72905710 ~ 72906089 (+) |
| G1324195 | NA | other | upstream | 1161281 | 72860820 ~ 72865809 (+) |
| G1324156 | LOC106576365 | other | upstream | 1171068 | 72853566 ~ 72856022 (+) |
| G1325481 | NA | other | downstream | 106391 | 74238339 ~ 74240169 (+) |
| LOC110517153 | cpm | other | downstream | 595851 | 74657149 ~ 74743482 (+) |
| G1326191 | NA | other | downstream | 981741 | 75113689 ~ 75114514 (+) |
| G1326467 | NA | other | downstream | 1390921 | 75522869 ~ 75527017 (+) |
| G1326503 | cand1 | other | downstream | 1461643 | 75593591 ~ 75598515 (+) |
