XLOC_031656


Basic Information

Item Value
gene id XLOC_031656
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 68622098 ~ 68668542 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062150
GGGTGAGGGAGATGTGTTTGTTGCAGCCTTCACATTATGGCATGCTTTGTTTCCAAGCATATCGATATCCATGGAAACTGAGTGATCCATTGGAAAGACACACACAGTTAACACCACACAAACCTGGACCTCTGCCCACAACTGCCAAGACCAACAGCTTTTCTGCTATACGAAGACTTTAACTACTCTGAGTCTGTAGGAAGATTattgttcgagtcccagctgggtcacatgacatttctgtatttgcatgttctccctatgttggtgtgggttttccccaggtttccccctcaagtccaaacacatgcgc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062150 True 313 lncRNA 0.46 2 68622098 68668542

Neighbor

gene id symbol gene type direction distance location
XLOC_031655 LO017735.1 coding downstream 4009 68617958 ~ 68618089 (-)
XLOC_031653 ephb4a coding downstream 126131 68408346 ~ 68495967 (-)
XLOC_031652 h1m coding downstream 289017 68326858 ~ 68333081 (-)
XLOC_031651 KIF1C coding downstream 362351 68228268 ~ 68259747 (-)
XLOC_031650 CABZ01083943.1 coding downstream 407764 68205952 ~ 68214334 (-)
XLOC_031657 mepce coding upstream 97341 68765883 ~ 68782641 (-)
XLOC_031658 her1 coding upstream 120116 68788658 ~ 68795063 (-)
XLOC_031659 NA coding upstream 145381 68813923 ~ 68816110 (-)
XLOC_031660 C5H2orf68 coding upstream 148492 68817034 ~ 68826177 (-)
XLOC_031661 sftpbb coding upstream 176506 68845048 ~ 68876211 (-)
XLOC_031644 NA non-coding downstream 649756 67964507 ~ 67972342 (-)
XLOC_031627 BX897741.1 non-coding downstream 1457679 67161442 ~ 67164419 (-)
XLOC_031620 CU929288.1 non-coding downstream 2084764 66537217 ~ 66537334 (-)
XLOC_031662 NA non-coding upstream 221935 68890477 ~ 68893011 (-)
XLOC_031664 dre-mir-2188 non-coding upstream 353317 69021859 ~ 69021962 (-)
XLOC_031669 FQ311924.2 non-coding upstream 651436 69319978 ~ 69351280 (-)
XLOC_031681 CT978957.3 non-coding upstream 987852 69656394 ~ 69656508 (-)

Expression


Co-expression Network