LOC110513781 (LOC106599032)



Basic Information


Item Value
gene id LOC110513781
gene name LOC106599032
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 76477549 ~ 76499886 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036945422.1
TGCCACTTCCTTGTTTTTATGTCAGCTGTCAAATTCAATTGACGCGCGAAATAagcaaaacaaaacagaaatgtCACAGTCGGGGTGTCCTCTTGGTGACAGAATCCTAGTAGGTTACATTTTACCCGAAAAGAAGGTTAAAAACCCCGAAAATGACGACTCTGATTGGGAAGATGATGAGGAGGAAGAAGATGCACAGCCGGATTTTCTGGATATGAAAGAGATGGACAGCGTTAGTTCAGGAGGACATGTGTTTAATTCCTCCGTACCGGGCCGAAACGAAGTTGATTTCCTGGACAGCGTGTCTGGTAAGAGATGCAGAGTAATGGGCCGGTTCAGTCTGAAGGACCCGTGGTGGGAGGCTACCTGCACGACCCGCGCTGCCAAGGGCAAGCTGGTGCTACGGGGCTACCCTGCCTACCGCCTTCGCTCAGACCTCCAGGGAGACCCGGAccactctgtcctgtctctgttcctcACCGCCTGCGGCGTGGACGCACAGTTTGTCGTCCCCTTCTTTGCTTGGCTGCCGATGGGAAGGAAGGTGGAGTTTGCTAACTTGCAGGAAGTTCTGGCTGAGTTTGAGGAAGGAGAGCAGCACAGGGCTTTGGCACAGCAGATTAAAGCCTTGGTCTCTGTTTCAGTTGCAGGGATGCGCGTGACTGCTGCCTCTCTGTACCCCCATGTGATGAGATACCTGCCTACCCTACTGCCAGGGCGCTTCACAGAGCTCCTGAGTCGGGGAAAGAAAAGCCAAAAACATCCTGCGGCACAGGGTGCTACacagatagaggaggaggaggaagaggaggatctcaGCTTGCTGGCCAAAATAGAGGAGATGATCAAGACGGACGTCTGGAAGCTGGGCTTTAACTATgttatGTACAAGGAGTTGAAGGTGGTCCATTGCGAGGCTCAGCTGAGATCCTTCCATGAGTGTAAACTCTTCCAAGAGATCCCTCTGAAGCAGCGTAACGCCCTGCAAGTCTACGACTCTCTGAAGAACCACTGCTGCAGGACGGGCAGTACCTACACGGAGCTCCCCACCCTGTGTGACGAGGTCAGGAGAGGGTGTAGCTCCGTGATGGAGGTGGAGGTGTGGGACGCAGTCCACTTCCTCAAAGAGCTGGGCGTCGTGGTACGGGATCGCCAGAAGGTGGCGCTGCAGAACCTGCATTCTTATGAGACTGGGATAGCTGAGTGCCTACGCTGTCTGGTGCAGGAAGAGCCCTGGGTTATACCTCTGGATGTCATAGAGGTGCTGACTGCTTCAGCTCTGGAGAGGCTGAGGAAGacgggaggggatggagggagtagggaggatcaAGGTGAAGTGGACTCCGACGCAGAGCGGAAGGCTGATGAGCTGAATGAAAGGTGTGATATGGATGGCAGCGCTGCAGAGACAGACCGTACTAGTGCTGCTGTTAGAACAGCCAGCGGATACTCTGTCCCAGACCACATCAAACCTGAACCAGCCCCTACAGACCAGGGCCCTCCAGTAGATTTAGACCCAGCCCAGGGCCCTCCTCCAGTAGATTTAGACCCAGACCAGGTACGTGCAGCAGAGATGATCTGCTTCAATCCAGTGACGGTGATCAGCGGTAAGGGGGGCTGTGGTAAGACAACGGTGGTGAGTCTGGTGTTCAAGGCCGCCTTGCAGCAGAGCCCAGAGAAGGAGGTCAGGAAGGCATGCTGGGACTTTGAAAATGACTCCTTGGGGTCTGAGGCGTGGGAGGAAGCCGATGCGTGGGAGGAAGAAGCCCTGTCGAAGAGTCTCCTCTCTCAGTTAGAGGGGGAGGTAAAGGACGAGAAGAAGAAGTCGTCGTTGTGGGTTTTACAGGGAGAGGACGAGGTGTTACTAACAGCACCGACAGGGAGAGCTGCGTCTCTGCTCACCAAGAGGACCTGCTTCAAGGCCTACACCCTGCACCAGGTAGTGTGGAGTTTCATGCAGGCCAAGAAAGACCCCAACGGGGCTCCTGAGGAGTGGAAGTTTGCGTCTGTGCGCGTGTTGGTGGTGGACGAGGGCAGTCTGGTGTGTGTTCAGCTCCTCCACTCCGTCCTCACTATGCTCACCAAACACGCACAGCTCAGGAAGTTCGTCATCTTGGGTGATGTGCGTCAGCTGCCCAGTATCCAGCCAGGAAACACCTTGTATGACCTGTTCCACAGTCTGGGCCGAGCCCATTGGGCCATCGAGATGAGGACCAATCACAGAGCTGAGTCTCAACTCATCGTCAACAACGCCGGACAaattgcAGAGATGGGGATGAATCGTAGTTTCAGACCGCTCCACTACGACGCCATCTTGGATCTGAATGGAAGTTACACCATGCCCTCTGAAGACAAGAGGTTCATCCTCATCCTGCTGCCCAACACCGACTCTGACTCTGACTATGACCTTCAGGTGGCTATCGAACTACTATTGAAAGCTGCTCCAGGACTGAGGAATGACGCCACGTCACAGTTCATTGCCTTCAGACGGAAGGAGTGTGTCTTGATCAATGAGCTTTGCTGCAAACATTACTGCGACCACCGCACCAAAAACAACAAGAACCGACTAGATTTCCAGCCGAGAGATAAAGTCTGCTGTACAAAGAACGGCTACGTCACAGACAGGAACAAGGAAGTGTCTCCCGAAGAAGAGGACTTGGAGAACAGCTACGTATCTGACACGGACAGGACCAAGCGGAGACTTCCTGGTCTGGacggaggggagagacggagagggaacgGGGCCACACAGAGAGACGGAAGTGGTGACAAAATGAAAACTAAAGAGAAGAATAAAGAGCGTCTGTGTAACGGAGAGATATTCTTCATTAAACATGACGTGACAGAGGAGGAGGCGGGCTCACAGCGGAGCAGGAAGCAGAGGTACTTGACTCTGGATGATGGTGACGGACGGGAGCTGTGTGTTTCCTTCAGGGAGCTGCAGAGAGAATGTAAACTGCAACACGCCTGGGCTAGGACCATACACAccttccagGGGTCGGAGACCGAGACGATTGTGTACGTGCTGGGTAACGGTAGCGTCCAGACGTGGAAGCACGTGTACACGGCTGTGACACGGGGACAGAAGCGTGTATATGTCATAGCCAAGCGGGAGGGCATGGCCTCGGCCATCAAGAGACGCATCATCCCACGTAACACCCGGCTGGGAACCCTGGTCAAAGAGCTGTTGGTCCAGCCTGGGGCTGAGGGGCAGgaccaaccagaccagaaccaacCACAGCCGGGCACACCTCGCAGGGCAGCCCCAAGCTTCGGACCTACACAGACCACTCCTCTGGCCTCACAGACACCTAGCGGGTCTCTAAGGACCCCCTACAAAACCCCTATAGCAGCACCCAGACTCATTTCTACGCCCAGCCTAGCAGTCCCACTTCACGCCAATCGTGTCCAGTCCCACTCTACGTCGGTCCTACCCAGGAAGCTGTGGAGAAATGAGCCTCCAACAGCTCCTCAGGCAGATGCCTCAGACACCTCTCTAATGGACGACATCACTTTCAGTCAGGCATATACCTGGTCGCCTATGAACAGCAGCTCTGAGGACCCCTCTCAGGAGCAGCCTGGGtcgtgtgaggaggaggaggaagggatcgAGATGGAGGCTAgcagcagcgctgtagaggatGGACACATGGGGAAGGGTTCACATTTAGCTGCTCGGTCTGGGGTTGAGAGCACCCCTTCCAAGAGGACGCTCAGTCCTGACAGTGAGAAACAGAATGTAACTCATAAACAGATCAAGGTGGAGCCATTCGAATCACCGCTGGGCTGTTCCAGACTGCAGCAGCTCGCCCTCTGCACGCCCACCTCCCACGGCAAACGGCTTTTCCAAGGTCCACCCTCCGATCAGGACTGAACGTCTTCTCTCCCTGACCCATTGAAACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGACATCTTATGATTGATGGCCACTACTGCATTGATACCAGGACATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCAACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATGCAcggaatacaagtgtagaccttaccatgaaatgcttacttacaagcccataaccaatAATGCAATTTTAATTAAAAATAAGAGTTAAAAAtgatatttactaaataaactcgTTTTTTAAAAAGTAacgcaataaaataaaaattgtgaggttatatacagggggtaccggtaccgagacaATGTGTAGGGGGGTAGAGGTTAGTCGAGGTGATTGAGGTAGGTAGGGGtaacgtgactatgcatagatcatAGAGAGGAGca
>XM_036945421.1
TTGCCACTTCCTTGTTTTTATGTCAGCTGTCAAATTCAATTGACGCGCGAAATAagcaaaacaaaacagaaatgtCACAGTCGGGGTGTCCTCTTGGTGACAGAATCCTAGTAGGTTACATTTTACCCGAAAAGAAGGTTAAAAACCCCGAAAATGACGACTCTGATTGGGAAGATGATGAGGAGGAAGAAGATGCACAGCCGGATTTTCTGGATATGAAAGAGATGGACAGCGTTAGTTCAGGAGGACATGTGTTTAATTCCTCCGTACCGGGCCGAAACGAAGTTGATTTCCTGGACAGCGTGTCTGGTAAGAGATGCAGAGTAATGGGCCGGTTCAGTCTGAAGGACCCGTGGTGGGAGGCTACCTGCACGACCCGCGCTGCCAAGGGCAAGCTGGTGCTACGGGGCTACCCTGCCTACCGCCTTCGCTCAGACCTCCAGGGAGACCCGGAccactctgtcctgtctctgttcctcACCGCCTGCGGCGTGGACGCACAGTTTGTCGTCCCCTTCTTTGCTTGGCTGCCGATGGGAAGGAAGGTGGAGTTTGCTAACTTGCAGGAAGTTCTGGCTGAGTTTGAGGAAGGAGAGCAGCACAGGGCTTTGGCACAGCAGATTAAAGCCTTGGTCTCTGTTTCAGTTGCAGGGATGCGCGTGACTGCTGCCTCTCTGTACCCCCATGTGATGAGATACCTGCCTACCCTACTGCCAGGGCGCTTCACAGAGCTCCTGAGTCGGGGAAAGAAAAGCCAAAAACATCCTGCGGCACAGGGTGCTACacagatagaggaggaggaggaagaggaggatctcaGCTTGCTGGCCAAAATAGAGGAGATGATCAAGACGGACGTCTGGAAGCTGGGCTTTAACTATgttatGTACAAGGAGTTGAAGGTGGTCCATTGCGAGGCTCAGCTGAGATCCTTCCATGAGTGTAAACTCTTCCAAGAGATCCCTCTGAAGCAGCGTAACGCCCTGCAAGTCTACGACTCTCTGAAGAACCACTGCTGCAGGACGGGCAGTACCTACACGGAGCTCCCCACCCTGTGTGACGAGGTCAGGAGAGGGTGTAGCTCCGTGATGGAGGTGGAGGTGTGGGACGCAGTCCACTTCCTCAAAGAGCTGGGCGTCGTGGTACGGGATCGCCAGAAGGTGGCGCTGCAGAACCTGCATTCTTATGAGACTGGGATAGCTGAGTGCCTACGCTGTCTGGTGCAGGAAGAGCCCTGGGTTATACCTCTGGATGTCATAGAGGTGCTGACTGCTTCAGCTCTGGAGAGGCTGAGGAAGacgggaggggatggagggagtagggaggatcaAGGTGAAGTGGACTCCGACGCAGAGCGGAAGGCTGATGAGCTGAATGAAAGGTGTGATATGGATGGCAGCGCTGCAGAGACAGACCGTACTAGTGCTGCTGTTAGAACAGCCAGCGGATACTCTGTCCCAGACCACATCAAACCTGAACCAGCCCCTACAGACCAGGGCCCTCCAGTAGATTTAGACCCAGCCCAGGGCCCTCCTCCAGTAGATTTAGACCCAGACCAGGTACGTGCAGCAGAGATGATCTGCTTCAATCCAGTGACGGTGATCAGCGGTAAGGGGGGCTGTGGTAAGACAACGGTGGTGAGTCTGGTGTTCAAGGCCGCCTTGCAGCAGAGCCCAGAGAAGGAGGTCAGGAAGGCATGCTGGGACTTTGAAAATGACTCCTTGGGGTCTGAGGCGTGGGAGGAAGCCGATGCGTGGGAGGAAGAAGCCCTGTCGAAGAGTCTCCTCTCTCAGTTAGAGGGGGAGGTAAAGGACGAGAAGAAGAAGTCGTCGTTGTGGGTTTTACAGGGAGAGGACGAGGTGTTACTAACAGCACCGACAGGGAGAGCTGCGTCTCTGCTCACCAAGAGGACCTGCTTCAAGGCCTACACCCTGCACCAGGTAGTGTGGAGTTTCATGCAGGCCAAGAAAGACCCCAACGGGGCTCCTGAGGAGTGGAAGTTTGCGTCTGTGCGCGTGTTGGTGGTGGACGAGGGCAGTCTGGTGTGTGTTCAGCTCCTCCACTCCGTCCTCACTATGCTCACCAAACACGCACAGCTCAGGAAGTTCGTCATCTTGGGTGATGTGCGTCAGCTGCCCAGTATCCAGCCAGGAAACACCTTGTACGGCCTGTTCCACAGTCTGCCTGTTTGTCTAGGTGATGTGCGTCAGCTGCCCAGTATCCAGCCAGGAAACACCTTGTATGGCCTGTTCCACAGTCTGCCTGTTTGTCTAGGTGATGTGCGTCAGCTGCCCAGTATCCAGCCAGGAAACACCTTGTATGGCCTGTTCCACAGTCTGCCTGTTTGTCTAGGTGATGTGCGTCAGCTGCCCAGTATCCAGCCAGGAAACACCTTGTATGACCTGTTCCACAGTCTGGGCCGAGCCCATTGGGCCATCGAGATGAGGACCAATCACAGAGCTGAGTCTCAACTCATCGTCAACAACGCCGGACAaattgcAGAGATGGGGATGAATCGTAGTTTCAGACCGCTCCACTACGACGCCATCTTGGATCTGAATGGAAGTTACACCATGCCCTCTGAAGACAAGAGGTTCATCCTCATCCTGCTGCCCAACACCGACTCTGACTCTGACTATGACCTTCAGGTGGCTATCGAACTACTATTGAAAGCTGCTCCAGGACTGAGGAATGACGCCACGTCACAGTTCATTGCCTTCAGACGGAAGGAGTGTGTCTTGATCAATGAGCTTTGCTGCAAACATTACTGCGACCACCGCACCAAAAACAACAAGAACCGACTAGATTTCCAGCCGAGAGATAAAGTCTGCTGTACAAAGAACGGCTACGTCACAGACAGGAACAAGGAAGTGTCTCCCGAAGAAGAGGACTTGGAGAACAGCTACGTATCTGACACGGACAGGACCAAGCGGAGACTTCCTGGTCTGGacggaggggagagacggagagggaacgGGGCCACACAGAGAGACGGAAGTGGTGACAAAATGAAAACTAAAGAGAAGAATAAAGAGCGTCTGTGTAACGGAGAGATATTCTTCATTAAACATGACGTGACAGAGGAGGAGGCGGGCTCACAGCGGAGCAGGAAGCAGAGGTACTTGACTCTGGATGATGGTGACGGACGGGAGCTGTGTGTTTCCTTCAGGGAGCTGCAGAGAGAATGTAAACTGCAACACGCCTGGGCTAGGACCATACACAccttccagGGGTCGGAGACCGAGACGATTGTGTACGTGCTGGGTAACGGTAGCGTCCAGACGTGGAAGCACGTGTACACGGCTGTGACACGGGGACAGAAGCGTGTATATGTCATAGCCAAGCGGGAGGGCATGGCCTCGGCCATCAAGAGACGCATCATCCCACGTAACACCCGGCTGGGAACCCTGGTCAAAGAGCTGTTGGTCCAGCCTGGGGCTGAGGGGCAGgaccaaccagaccagaaccaacCACAGCCGGGCACACCTCGCAGGGCAGCCCCAAGCTTCGGACCTACACAGACCACTCCTCTGGCCTCACAGACACCTAGCGGGTCTCTAAGGACCCCCTACAAAACCCCTATAGCAGCACCCAGACTCATTTCTACGCCCAGCCTAGCAGTCCCACTTCACGCCAATCGTGTCCAGTCCCACTCTACGTCGGTCCTACCCAGGAAGCTGTGGAGAAATGAGCCTCCAACAGCTCCTCAGGCAGATGCCTCAGACACCTCTCTAATGGACGACATCACTTTCAGTCAGGCATATACCTGGTCGCCTATGAACAGCAGCTCTGAGGACCCCTCTCAGGAGCAGCCTGGGtcgtgtgaggaggaggaggaagggatcgAGATGGAGGCTAgcagcagcgctgtagaggatGGACACATGGGGAAGGGTTCACATTTAGCTGCTCGGTCTGGGGTTGAGAGCACCCCTTCCAAGAGGACGCTCAGTCCTGACAGTGAGAAACAGAATGTAACTCATAAACAGATCAAGGTGGAGCCATTCGAATCACCGCTGGGCTGTTCCAGACTGCAGCAGCTCGCCCTCTGCACGCCCACCTCCCACGGCAAACGGCTTTTCCAAGGTCCACCCTCCGATCAGGACTGAACGTCTTCTCTCCCTGACCCATTGAAACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGACATCTTATGATTGATGGCCACTACTGCATTGATACCAGGACATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCAACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATTGATACCAGGATATCTTATGATTGATGGCCACTACTGCATGCAcggaatacaagtgtagaccttaccatgaaatgcttacttacaagcccataaccaatAATGCAATTTTAATTAAAAATAAGAGTTAAAAAtgatatttactaaataaactcgTTTTTTAAAAAGTAacgcaataaaataaaaattgtgaggttatatacagggggtaccggtaccgagacaATGTGTAGGGGGGTAGAGGTTAGTCGAGGTGATTGAGGTAGGTAGGGGtaacgtgactatgcatagatcatAGAGAGGAGca

Function


NR:

description
DNA helicase B-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036945422.1 False 4761 mRNA 0.52 14 76477549 76499885
XM_036945421.1 True 4996 mRNA 0.52 14 76477549 76499886

Neighbor


gene id symbol gene type direction distance location
LOC110490682 cand1 coding downstream 829388 75564608 ~ 75648161 (-)
LOC110518764 LOC106576636 coding downstream 930510 75520301 ~ 75547039 (-)
LOC118938932 NA coding downstream 1285615 75190621 ~ 75191934 (-)
LOC110490689 rap1b coding downstream 1489218 74883029 ~ 74988331 (-)
LOC110514333 nu107 coding downstream 1601230 74806009 ~ 74876319 (-)
LOC118936278 irak3 coding upstream 233 76500119 ~ 76525322 (-)
LOC110514961 LOC106590998 coding upstream 175235 76675121 ~ 76681446 (-)
LOC110512778 trhde coding upstream 371581 76871462 ~ 77277803 (-)
LOC118938902 NA coding upstream 851392 77351278 ~ 77352450 (-)
LOC110515635 LOC106576658 coding upstream 918377 77418263 ~ 77506802 (-)
G1327165 NA non-coding downstream 2998 76474222 ~ 76474551 (-)
G1327167 NA non-coding downstream 5424 76469915 ~ 76472125 (-)
G1327107 NA non-coding downstream 182784 76294202 ~ 76294765 (-)
G1327091 NA non-coding downstream 221521 76255623 ~ 76256028 (-)
G1327085 NA non-coding downstream 243899 76233448 ~ 76233650 (-)
G1327196 NA non-coding upstream 53911 76553797 ~ 76554211 (-)
G1327209 NA non-coding upstream 63606 76563492 ~ 76563843 (-)
G1327213 NA non-coding upstream 68611 76568497 ~ 76568725 (-)
G1327292 NA non-coding upstream 134713 76634599 ~ 76635961 (-)
G1326996 NA other downstream 478549 75998506 ~ 75999000 (-)
G1326164 NA other downstream 1424192 75052749 ~ 75053357 (-)
G1326095 NA other downstream 1703596 74772299 ~ 74773953 (-)
G1326070 NA other downstream 1754149 74722589 ~ 74723400 (-)
LOC118938855 LOC106576675 other downstream 1870233 74602942 ~ 74607316 (-)
G1328123 NA other upstream 1371393 77871279 ~ 77874604 (-)
LOC118938867 LOC106576670 other upstream 1798690 78298576 ~ 78452504 (-)
G1328815 NA other upstream 2263213 78763099 ~ 78766048 (-)
G1328861 NA other upstream 2370439 78870325 ~ 78871031 (-)

Expression



Co-expression Network