rab21


Basic Information

Item Value
gene id rab21
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 77533131 ~ 77536232 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036245.1
CATCACAGGGAAGAGGGTGAACCTGGCCATATGGgaTACAGCAGGTCAGGAGCGGTTCCACGCGTTAGGTCCCATCTACTACAGAGACTCCAACGGAGCCATATTGGTCTATGACATCACAGATGAGGACTCATTCCAGAAGGT
>TU1516815
TTCCTCACCAAGAAGCTCAACATCACAGGGAAGAGGGTGAACCTGGCCATATGGgaTACAGCAGGTCAGGAGCGGTTCCACGCGTTAGGTCCCATCTACTACAGAGACTCCAACGGAGCCATATTGGTCTATGACATCACAGATGAGGACTCATTCCAGAAGgTGAAAAACTGGGTGAAAGAATTGAGGAAAATGTTGGGGAACGAGATTTGTTTATGTATAGTAGGTAAGTCATTGCAGACCACAGCTAACTTTTCACTTTTCAACACTTCTTTTATTGTTTGTCTCATTTCACCCTGTAAATGGATCCAtcttgggcaggtagcctagtggttagaggtaggggtagcctagtggttagaggcagggtagcctagtggttagaggtagggtggcctagtggttagaggcagggtagcctagtggttagaggtaggggtagcctagtggttagaggcagggtagcctagtggttagaggcagggtagcctagtggttagaggtaggggtagcctagtggttagaggcaggggtagcctagtggttagaggcagggtagcctagtggttagaggtaggggtagcctagtggttagaggcagggtagcctagtggttagaggtaggg

Function

NR:

description
PREDICTED: ras-related protein Rab-21

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0015031 protein transport biological_process
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036245.1 False 144 mRNA 0.52 2 77533908 77536212
TU1516815 True 626 lncRNA 0.50 3 77533131 77536232

Neighbor

gene id symbol gene type direction distance location
LOC118936539 LOC106597902 coding downstream 18696 77514286 ~ 77515212 (-)
LOC110515635 LOC106576658 coding downstream 27106 77418263 ~ 77506802 (-)
LOC118938902 NA coding downstream 181458 77351278 ~ 77352450 (-)
LOC110512778 trhde coding downstream 256105 76871462 ~ 77277803 (-)
LOC110514961 LOC106590998 coding downstream 852462 76675121 ~ 76681446 (-)
LOC110516314 NA coding upstream 38985 77575197 ~ 77581151 (-)
trnak-cuu-8 NA coding upstream 45337 77581549 ~ 77581621 (-)
LOC110511982 tmem19 coding upstream 47654 77583866 ~ 77609486 (-)
trnak-cuu-9 NA coding upstream 49878 77586090 ~ 77586162 (-)
trnak-cuu-10 NA coding upstream 50507 77586719 ~ 77586791 (-)
G1327903 NA non-coding downstream 15515 77517464 ~ 77518393 (-)
G1327927 NA non-coding downstream 52627 77480922 ~ 77481281 (-)
G1327922 NA non-coding downstream 78209 77455388 ~ 77455699 (-)
G1327900 NA non-coding downstream 119266 77413080 ~ 77414642 (-)
G1327902 NA non-coding downstream 121044 77412055 ~ 77412864 (-)
G1327945 NA non-coding upstream 6220 77542432 ~ 77544588 (-)
G1327946 NA non-coding upstream 26546 77562758 ~ 77563237 (-)
trnak-cuu-19 NA non-coding upstream 51165 77587377 ~ 77598491 (-)
G1327955 NA non-coding upstream 55881 77592093 ~ 77594387 (-)
G1326996 NA other downstream 1534908 75998506 ~ 75999000 (-)
G1326164 NA other downstream 2480551 75052749 ~ 75053357 (-)
G1326095 NA other downstream 2759955 74772299 ~ 74773953 (-)
G1326070 NA other downstream 2810508 74722589 ~ 74723400 (-)
G1328123 NA other upstream 335067 77871279 ~ 77874604 (-)
LOC118938867 LOC106576670 other upstream 762364 78298576 ~ 78452504 (-)
G1328815 NA other upstream 1226887 78763099 ~ 78766048 (-)
G1328861 NA other upstream 1334113 78870325 ~ 78871031 (-)
G1328892 NA other upstream 1389702 78925914 ~ 78926137 (-)

Expression


Co-expression Network