Gene
RNA
| Item | Value |
|---|---|
| gene id | trnaa-ugc-124 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 78532470 ~ 78532540 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Deoxyribonuclease gamma precursor |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnaa-ugc-124 | True | 71 | mRNA | 0.59 | 1 | 78532470 | 78532540 |
78,529,400
78,529,600
78,529,800
78,530,000
78,530,200
78,530,400
78,530,600
78,530,800
78,531,000
78,531,200
78,531,400
78,531,600
78,531,800
78,532,000
78,532,200
78,532,400
78,532,600
78,532,800
78,533,000
78,533,200
78,533,400
78,533,600
NC_048579.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938868 | LOC106591072 | coding | upstream | 15960 | 78471597 ~ 78516510 (+) |
| LOC110507939 | LOC106592658 | coding | upstream | 16217 | 78514421 ~ 78516253 (+) |
| LOC118938866 | LOC108426397 | coding | upstream | 254867 | 78225874 ~ 78277603 (+) |
| il17r | il17r | coding | upstream | 383639 | 78123082 ~ 78148831 (+) |
| rergla | LOC106609822 | coding | upstream | 425453 | 78095531 ~ 78107017 (+) |
| LOC110510817 | LOC106592244 | coding | downstream | 117034 | 78649574 ~ 78658219 (+) |
| LOC118936267 | mrps33 | coding | downstream | 216790 | 78749330 ~ 78763988 (+) |
| LOC118938871 | braf | coding | downstream | 247661 | 78780201 ~ 78826735 (+) |
| LOC118938872 | large1 | coding | downstream | 615925 | 79148465 ~ 79293033 (+) |
| LOC118938875 | NA | coding | downstream | 1079154 | 79608818 ~ 79640460 (+) |
| G1328546 | NA | non-coding | upstream | 7573 | 78524652 ~ 78524897 (+) |
| G1328524 | NA | non-coding | upstream | 13559 | 78470353 ~ 78518911 (+) |
| G1328526 | NA | non-coding | upstream | 15968 | 78516038 ~ 78516502 (+) |
| G1328535 | NA | non-coding | upstream | 33262 | 78491510 ~ 78499208 (+) |
| G1328523 | NA | non-coding | upstream | 62277 | 78469972 ~ 78470193 (+) |
| G1328561 | NA | non-coding | downstream | 33370 | 78565910 ~ 78586743 (+) |
| G1328548 | NA | non-coding | downstream | 38864 | 78571404 ~ 78573510 (+) |
| G1328583 | NA | non-coding | downstream | 81649 | 78614189 ~ 78615027 (+) |
| G1328596 | NA | non-coding | downstream | 99002 | 78631542 ~ 78632729 (+) |
| G1328598 | NA | non-coding | downstream | 104283 | 78636823 ~ 78678612 (+) |
| G1328201 | NA | other | upstream | 462067 | 78070029 ~ 78070403 (+) |
| LOC110490691 | arhgef39 | other | upstream | 514659 | 77958971 ~ 78066964 (+) |
| G1327379 | NA | other | upstream | 1719182 | 76809860 ~ 76813288 (+) |
| G1327230 | NA | other | upstream | 1942585 | 76587574 ~ 76589885 (+) |
| G1326605 | NA | other | upstream | 2647323 | 75884811 ~ 75885147 (+) |
| G1328968 | NA | other | downstream | 506064 | 79038604 ~ 79039457 (+) |
| G1329153 | LOC106593057 | other | downstream | 1085857 | 79618397 ~ 79621951 (+) |
| G1329159 | NA | other | downstream | 1131374 | 79663914 ~ 79664732 (+) |
