XLOC_031664 (dre-mir-2188)


Basic Information

Item Value
gene id XLOC_031664
gene name dre-mir-2188
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 69021859 ~ 69021962 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061320
GGACAATATCAGCAATGTGAGAAAGGTCCAACCTCACATGTCCTGTGAGGCTGAAGGAAGGCTGTGTGAGGTTAGACCTATCCCACACGGCCCGTATTCTTCCC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000089634

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061320 True 104 miRNA 0.52 1 69021859 69021962

Neighbor

gene id symbol gene type direction distance location
XLOC_031662 NA coding downstream 128848 68890477 ~ 68893011 (-)
XLOC_031661 sftpbb coding downstream 145648 68845048 ~ 68876211 (-)
XLOC_031660 C5H2orf68 coding downstream 195682 68817034 ~ 68826177 (-)
XLOC_031659 NA coding downstream 205749 68813923 ~ 68816110 (-)
XLOC_031658 her1 coding downstream 226796 68788658 ~ 68795063 (-)
XLOC_031665 GANAB coding upstream 118694 69140656 ~ 69180601 (-)
XLOC_031666 mat2ab coding upstream 177236 69199198 ~ 69212184 (-)
XLOC_031667 inpp5jb coding upstream 210268 69232230 ~ 69271450 (-)
XLOC_031668 smtnb coding upstream 268028 69289990 ~ 69316206 (-)
XLOC_031669 FQ311924.2 coding upstream 298016 69319978 ~ 69351280 (-)
XLOC_031656 NA non-coding downstream 353317 68622098 ~ 68668542 (-)
XLOC_031655 LO017735.1 non-coding downstream 403770 68617958 ~ 68618089 (-)
XLOC_031650 CABZ01083943.1 non-coding downstream 807525 68205952 ~ 68214334 (-)
XLOC_031681 CT978957.3 non-coding upstream 634432 69656394 ~ 69656508 (-)
XLOC_031682 NA non-coding upstream 656111 69678073 ~ 69696089 (-)
XLOC_031686 NA non-coding upstream 827038 69849000 ~ 69855751 (-)
XLOC_031689 NA non-coding upstream 938764 69960726 ~ 69962413 (-)

Expression


Co-expression Network