Gene
RNA
| Item | Value |
|---|---|
| gene id | G1248264 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 274973 ~ 275222 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1425548 | True | 250 | lncRNA | 0.50 | 1 | 274973 | 275222 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| smpx | smpx | coding | downstream | 27815 | 211098 ~ 247177 (-) |
| LOC118938957 | NA | coding | downstream | 200981 | 73839 ~ 73992 (-) |
| LOC118938949 | NA | coding | downstream | 242539 | 16053 ~ 32434 (-) |
| vipr1b | vipr1 | coding | upstream | 297576 | 572798 ~ 805393 (-) |
| sec22c | sec22c | coding | upstream | 551376 | 826598 ~ 843603 (-) |
| LOC118938951 | NA | coding | upstream | 555850 | 830248 ~ 832327 (-) |
| klhl40b | LOC106590700 | coding | upstream | 749352 | 1024574 ~ 1040867 (-) |
| hhatlb | hhatl | coding | upstream | 779741 | 1054963 ~ 1101022 (-) |
| G1248256 | NA | non-coding | downstream | 5246 | 269256 ~ 269727 (-) |
| G1248164 | klhl34 | non-coding | downstream | 93650 | 177823 ~ 181323 (-) |
| G1248162 | NA | non-coding | downstream | 114391 | 158136 ~ 160582 (-) |
| G1248161 | NA | non-coding | downstream | 116953 | 157616 ~ 158020 (-) |
| G1248158 | NA | non-coding | downstream | 123412 | 151031 ~ 151561 (-) |
| G1248674 | NA | non-coding | upstream | 27045 | 302267 ~ 305285 (-) |
| G1248676 | NA | non-coding | upstream | 32682 | 307904 ~ 315614 (-) |
| G1248682 | mbtps2 | non-coding | upstream | 46417 | 321639 ~ 330649 (-) |
| G1248703 | NA | non-coding | upstream | 79339 | 354561 ~ 355241 (-) |
| G1248843 | NA | non-coding | upstream | 327136 | 602358 ~ 634603 (-) |
| G1249325 | NA | other | upstream | 1127974 | 1403196 ~ 1405878 (-) |
| G1249326 | LOC106581475 | other | upstream | 1133967 | 1409189 ~ 1411097 (-) |
| G1249729 | NA | other | upstream | 1531762 | 1806984 ~ 1807621 (-) |
| G1250031 | LOC107579696 | other | upstream | 2072369 | 2347591 ~ 2348068 (-) |
| G1250592 | NA | other | upstream | 2711892 | 2987114 ~ 2987410 (-) |
