Gene
RNA
| Item | Value |
|---|---|
| gene id | G1248509 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 764242 ~ 764446 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1425832 | True | 205 | lncRNA | 0.40 | 1 | 764242 | 764446 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-161h7.4 | LOC106590704 | coding | upstream | 209224 | 507000 ~ 555018 (+) |
| LOC118938950 | NA | coding | upstream | 289671 | 470671 ~ 474571 (+) |
| ptchd1 | ptchd1 | coding | upstream | 293601 | 389255 ~ 470641 (+) |
| phex | phex | coding | upstream | 390839 | 359420 ~ 373403 (+) |
| mbtps2 | mbtps2 | coding | upstream | 412955 | 280836 ~ 351287 (+) |
| zbtb47b | zbtb47 | coding | downstream | 106762 | 871208 ~ 1014733 (+) |
| LOC110490871 | LOC106584129 | coding | downstream | 292102 | 1056548 ~ 1057743 (+) |
| vill | vill | coding | downstream | 365793 | 1130239 ~ 1193766 (+) |
| map3k22 | LOC106590696 | coding | downstream | 536194 | 1300640 ~ 1404290 (+) |
| myd88 | myd88 | coding | downstream | 652409 | 1416855 ~ 1427915 (+) |
| G1248493 | NA | non-coding | upstream | 41323 | 722555 ~ 722919 (+) |
| G1248485 | NA | non-coding | upstream | 51671 | 712224 ~ 712571 (+) |
| G1248484 | NA | non-coding | upstream | 52224 | 711750 ~ 712018 (+) |
| G1248476 | NA | non-coding | upstream | 66530 | 697499 ~ 697712 (+) |
| G1248469 | NA | non-coding | upstream | 73649 | 689866 ~ 690593 (+) |
| G1248514 | NA | non-coding | downstream | 30017 | 794463 ~ 794896 (+) |
| G1248531 | sec22c | non-coding | downstream | 62158 | 826604 ~ 828881 (+) |
| G1248580 | NA | non-coding | downstream | 141513 | 905959 ~ 906473 (+) |
| G1248583 | NA | non-coding | downstream | 149061 | 913507 ~ 914780 (+) |
| G1248594 | NA | non-coding | downstream | 240489 | 1004935 ~ 1005329 (+) |
| G1248124 | NA | other | upstream | 657771 | 79681 ~ 140421 (+) |
| G1249139 | NA | other | downstream | 645059 | 1409505 ~ 1410999 (+) |
| G1250120 | NA | other | downstream | 1708449 | 2472895 ~ 2473370 (+) |
| G1250863 | NA | other | downstream | 2589360 | 3353806 ~ 3354295 (+) |
| G1250885 | NA | other | downstream | 2606750 | 3371196 ~ 3372193 (+) |
| LOC110489525 | LOC106590672 | other | downstream | 3701330 | 4465748 ~ 4468522 (+) |
