XLOC_031682


Basic Information

Item Value
gene id XLOC_031682
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 69678073 ~ 69696089 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062153
ATGGACCTTCAGATCTGAAacactcaaaaatgttttgctgcattgatCACATTCGTGtgttctctctccagtgtggatcaacaTGTGTTTTTTAAAGTGTGATGATTGTATGAAACTAGTCCCGCACTGCacacatgtgaacggtttcttaccagtgtggatcttcatgtggtcATTAAGGGCTGACAATTGTCTAAAACTCGTCCCGCACTGAACACATGTGagcggtttctctccagtgtggatcaacatgtgttgattaaggtgtgatgattgtctgaaactcatcccacactgagcacatgtgaacggtttctctccagtgtggatcaacatgtgtttattaagggctGATAACTGTCTGAAACTCTTCCTGCACTGAacacatgtgaacggtttctctccagtgtgaatcttcatgtgttcacCAAGGGCTGCTGATTGTCtaaaactcttcccgcactgaacacatgtgaacggtttctctccagtgtggatcttcatgtgctGTTTAAGGGCTGACAATTGTCTAAAACTCGTCCCGCACTGAgcacatgtgaacggtttctctccagtgtggatcaacatgtgttgattaaggtgtgatgattgcaAGAAACTCGTCCCGCACTGAGCACATGAGAactgtttctctccagtgtgtatcaACATGTGTTTATAAAGGTTTGACgattgtctgaaactcttcccgcactggACACATGtaaaaggtttctctccagtgtggatctttatgtgtttattaagtgCTGACGATTGTCTGAAACTTGTCCCACACTGAacacatgtgaatggtttctctccagtgtgaatcttcaTATGCTGATTAAGGGCTGATGTTTGTCTGAAACTCGTCCCGCACTGAgcacatgtgaacggtttctctccagtgtgcatCATCATGTGAATCCTGAGACTCTTTTGGCAgcccaaactctttccacactgagtgcaggtcaaACATGTTTTGTCTTTTCTCTTCAGTGAGCcagtttt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062153 True 1017 lncRNA 0.44 2 69678073 69696089

Neighbor

gene id symbol gene type direction distance location
XLOC_031681 CT978957.3 coding downstream 21565 69656394 ~ 69656508 (-)
XLOC_031680 eif2b1 coding downstream 29011 69641166 ~ 69649062 (-)
XLOC_031679 aldh2.2 coding downstream 56846 69597166 ~ 69621227 (-)
XLOC_031678 aldh2.1 coding downstream 82586 69574677 ~ 69595487 (-)
XLOC_031677 mapkapk5 coding downstream 106501 69553686 ~ 69571572 (-)
XLOC_031683 dguok coding upstream 6513 69702602 ~ 69707794 (-)
XLOC_031684 mob1a coding upstream 12439 69708528 ~ 69716501 (-)
XLOC_031685 rilpl2 coding upstream 99115 69795204 ~ 69804433 (-)
XLOC_031686 NA coding upstream 152911 69849000 ~ 69855751 (-)
XLOC_031687 fktn coding upstream 211133 69907222 ~ 69924642 (-)
XLOC_031669 FQ311924.2 non-coding downstream 326793 69319978 ~ 69351280 (-)
XLOC_031664 dre-mir-2188 non-coding downstream 656111 69021859 ~ 69021962 (-)
XLOC_031662 NA non-coding downstream 785062 68890477 ~ 68893011 (-)
XLOC_031659 NA non-coding downstream 861963 68813923 ~ 68816110 (-)
XLOC_031689 NA non-coding upstream 264637 69960726 ~ 69962413 (-)
XLOC_031690 NA non-coding upstream 481915 70178004 ~ 70200935 (-)
XLOC_031691 NA non-coding upstream 624922 70321011 ~ 70324081 (-)
XLOC_031692 NA non-coding upstream 765389 70461478 ~ 70508237 (-)

Expression


Co-expression Network