Gene
RNA
| Item | Value |
|---|---|
| gene id | G1249988 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 2296872 ~ 2297104 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1427792 | True | 233 | lncRNA | 0.39 | 1 | 2296872 | 2297104 |
2,295,600
2,296,000
2,296,400
2,296,800
2,297,200
2,297,600
2,298,000
2,298,400
2,298,800
2,299,200
2,299,600
2,300,000
NC_048579.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490877 | LOC106579762 | coding | downstream | 228648 | 2063991 ~ 2068224 (-) |
| cpb1 | cbpb1 | coding | downstream | 243362 | 2030601 ~ 2053510 (-) |
| LOC110489515 | glyg | coding | downstream | 401725 | 1858530 ~ 1895147 (-) |
| LOC118938935 | NA | coding | downstream | 603440 | 1614045 ~ 1693432 (-) |
| LOC110490875 | LOC106590692 | coding | downstream | 695265 | 1533090 ~ 1601607 (-) |
| zic1 | LOC100136467 | coding | upstream | 158819 | 2455923 ~ 2460981 (-) |
| dipk2ab | LOC106590677 | coding | upstream | 1573545 | 3870649 ~ 3976512 (-) |
| LOC110512106 | LOC106590676 | coding | upstream | 1735124 | 4032228 ~ 4101181 (-) |
| LOC110490880 | LOC106590674 | coding | upstream | 1857148 | 4154252 ~ 4167691 (-) |
| LOC118938936 | NA | coding | upstream | 2271425 | 4568529 ~ 4570176 (-) |
| G1249961 | NA | non-coding | downstream | 24169 | 2272472 ~ 2272703 (-) |
| G1249960 | NA | non-coding | downstream | 26246 | 2270277 ~ 2270626 (-) |
| G1249959 | NA | non-coding | downstream | 26660 | 2270008 ~ 2270212 (-) |
| G1249958 | NA | non-coding | downstream | 26921 | 2269563 ~ 2269951 (-) |
| G1249957 | NA | non-coding | downstream | 27351 | 2269284 ~ 2269521 (-) |
| G1249991 | NA | non-coding | upstream | 3569 | 2300673 ~ 2300915 (-) |
| G1249994 | NA | non-coding | upstream | 5704 | 2302808 ~ 2303023 (-) |
| G1249995 | NA | non-coding | upstream | 6995 | 2304099 ~ 2304580 (-) |
| G1250011 | NA | non-coding | upstream | 17385 | 2314489 ~ 2316999 (-) |
| G1250019 | NA | non-coding | upstream | 32323 | 2329427 ~ 2330004 (-) |
| G1249729 | NA | other | downstream | 489251 | 1806984 ~ 1807621 (-) |
| G1249326 | LOC106581475 | other | downstream | 885929 | 1409189 ~ 1411097 (-) |
| G1249325 | NA | other | downstream | 890994 | 1403196 ~ 1405878 (-) |
| smpx | smpx | other | downstream | 2049695 | 211098 ~ 247177 (-) |
| G1250031 | LOC107579696 | other | upstream | 50487 | 2347591 ~ 2348068 (-) |
| G1250592 | NA | other | upstream | 690010 | 2987114 ~ 2987410 (-) |
| G1251965 | rpl7 | other | upstream | 2485536 | 4782640 ~ 4788427 (-) |
| G1252027 | NA | other | upstream | 2542280 | 4839384 ~ 4839879 (-) |
