Gene
RNA
| Item | Value |
|---|---|
| gene id | G1254656 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 7912048 ~ 7912381 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: stress response protein NST1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1433296 | True | 334 | lncRNA | 0.34 | 1 | 7912048 | 7912381 |
7,910,000
7,910,400
7,910,800
7,911,200
7,911,600
7,912,000
7,912,400
7,912,800
7,913,200
7,913,600
7,914,000
7,914,400
NC_048579.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490896 | NA | coding | upstream | 45970 | 7863667 ~ 7866078 (+) |
| LOC110489541 | arhgap29 | coding | upstream | 772485 | 7110207 ~ 7139563 (+) |
| LOC110489539 | LOC106590649 | coding | upstream | 826160 | 7075115 ~ 7085888 (+) |
| LOC110490889 | LOC106578491 | coding | upstream | 874289 | 7008276 ~ 7037759 (+) |
| alg14 | alg14 | coding | upstream | 909984 | 6997759 ~ 7002064 (+) |
| LOC110489552 | LOC106590631 | coding | downstream | 529278 | 8441659 ~ 8453058 (+) |
| LOC110489555 | LOC106590626 | coding | downstream | 717972 | 8630353 ~ 8649744 (+) |
| LOC110489556 | LOC106590625 | coding | downstream | 756700 | 8669081 ~ 8672326 (+) |
| LOC110490900 | dok6 | coding | downstream | 911135 | 8823516 ~ 8956345 (+) |
| LOC110489557 | LOC106590621 | coding | downstream | 1138163 | 9050544 ~ 9061028 (+) |
| G1254639 | NA | non-coding | upstream | 13199 | 7881549 ~ 7898849 (+) |
| G1254644 | NA | non-coding | upstream | 21759 | 7889870 ~ 7890289 (+) |
| G1254631 | NA | non-coding | upstream | 35996 | 7874949 ~ 7876052 (+) |
| G1254630 | NA | non-coding | upstream | 40554 | 7871011 ~ 7871494 (+) |
| G1254612 | NA | non-coding | upstream | 62797 | 7846995 ~ 7849251 (+) |
| G1254677 | NA | non-coding | downstream | 42341 | 7954722 ~ 7954930 (+) |
| G1254679 | NA | non-coding | downstream | 43552 | 7955933 ~ 7956379 (+) |
| G1254680 | NA | non-coding | downstream | 47146 | 7959527 ~ 7959747 (+) |
| G1254683 | NA | non-coding | downstream | 56803 | 7969184 ~ 7969455 (+) |
| G1254686 | NA | non-coding | downstream | 59006 | 7971387 ~ 7971626 (+) |
| G1253720 | LOC106590648 | other | upstream | 823013 | 7086331 ~ 7089035 (+) |
| G1253703 | LOC106590651 | other | upstream | 943632 | 6964482 ~ 6968416 (+) |
| LOC110490886 | LOC106590655 | other | upstream | 1583974 | 6242892 ~ 6328082 (+) |
| G1255589 | NA | other | downstream | 1106864 | 9019245 ~ 9019731 (+) |
| G1257500 | NA | other | downstream | 3222463 | 11134844 ~ 11135414 (+) |
| G1257551 | NA | other | downstream | 3339546 | 11251927 ~ 11269539 (+) |
| LOC110489585 | dap1 | other | downstream | 3528967 | 11441274 ~ 11461528 (+) |
